RNA–Protein interactions for RNA: ENST00000491860.1

NUP50-217, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-217ENST00000491860 ANXA13P27216 316 aa9.38□□□□□ -0.91
NUP50-217ENST00000491860 HOXA6P31267 233 aa9.38□□□□□ -0.91
NUP50-217ENST00000491860 AP3M2P53677 418 aa9.38□□□□□ -0.91
NUP50-217ENST00000491860 NLRP12P59046 1061 aa9.38□□□□□ -0.91
NUP50-217ENST00000491860 GRSF1Q12849 480 aaKnown RBP eCLIP9.38□□□□□ -0.91
NUP50-217ENST00000491860 PDGFRLQ15198 375 aa9.38□□□□□ -0.91
NUP50-217ENST00000491860 E2F4Q16254 413 aa9.38□□□□□ -0.91
NUP50-217ENST00000491860 SNRNP35Q16560 246 aaKnown RBP9.38□□□□□ -0.91
NUP50-217ENST00000491860 MON1AQ86VX9 555 aa9.38□□□□□ -0.91
NUP50-217ENST00000491860 C12orf56Q8IXR9 622 aa9.38□□□□□ -0.91
NUP50-217ENST00000491860 CEP57L1Q8IYX8 460 aa9.38□□□□□ -0.91
NUP50-217ENST00000491860 TTC9BQ8N6N2 239 aa9.38□□□□□ -0.91
NUP50-217ENST00000491860 XXYLT1Q8NBI6 393 aa9.38□□□□□ -0.91
NUP50-217ENST00000491860 GIPC2Q8TF65 315 aa9.38□□□□□ -0.91
NUP50-217ENST00000491860 DHX58Q96C10 678 aa9.38□□□□□ -0.91
NUP50-217ENST00000491860 HPDLQ96IR7 371 aa9.38□□□□□ -0.91
NUP50-217ENST00000491860 RTKNQ9BST9 563 aa9.38□□□□□ -0.91
NUP50-217ENST00000491860 PI4K2AQ9BTU6 479 aa9.38□□□□□ -0.91
NUP50-217ENST00000491860 SLC46A2Q9BY10 475 aa9.38□□□□□ -0.91
NUP50-217ENST00000491860 MTMR12Q9C0I1 747 aa9.38□□□□□ -0.91
NUP50-217ENST00000491860 PCIF1Q9H4Z3 704 aa9.38□□□□□ -0.91
NUP50-217ENST00000491860 TDP1Q9NUW8 608 aa9.38□□□□□ -0.91
NUP50-217ENST00000491860 MAGEC2Q9UBF1 373 aaPredicted RBP9.38□□□□□ -0.91
NUP50-217ENST00000491860 USP25Q9UHP3 1055 aa9.38□□□□□ -0.91
NUP50-217ENST00000491860 GPR179Q6PRD1 2367 aa9.38□□□□□ -0.91
NUP50-217ENST00000491860 KIF26AQ9ULI4 1882 aaPredicted RBP9.38□□□□□ -0.91
NUP50-217ENST00000491860 OBSL1O75147 1896 aa9.37□□□□□ -0.91
NUP50-217ENST00000491860 TRAV19A0A0A6YYK7 116 aa9.37□□□□□ -0.91
NUP50-217ENST00000491860 CCDC163A0A0D9SF12 145 aa9.37□□□□□ -0.91
NUP50-217ENST00000491860 GOLGA8IPA6NC78 632 aa9.37□□□□□ -0.91
NUP50-217ENST00000491860 SHISA7A6NL88 538 aa9.37□□□□□ -0.91
NUP50-217ENST00000491860 GOLGA8JA6NMD2 632 aa9.37□□□□□ -0.91
NUP50-217ENST00000491860 SLC38A8A6NNN8 435 aa9.37□□□□□ -0.91
NUP50-217ENST00000491860 TRIM66O15016 1216 aa9.37□□□□□ -0.91
NUP50-217ENST00000491860 KIF20AO95235 890 aa9.37□□□□□ -0.91
NUP50-217ENST00000491860 STAU1O95793 577 aaKnown RBP9.37□□□□□ -0.91
NUP50-217ENST00000491860 F13A1P00488 732 aa9.37□□□□□ -0.91
NUP50-217ENST00000491860 F11P03951 625 aa9.37□□□□□ -0.91
NUP50-217ENST00000491860 ADRB1P08588 477 aa9.37□□□□□ -0.91
NUP50-217ENST00000491860 USP17L7P0C7H9 530 aa9.37□□□□□ -0.91
NUP50-217ENST00000491860 TNNI1P19237 187 aa9.37□□□□□ -0.91
NUP50-217ENST00000491860 TRIM21P19474 475 aaKnown RBP9.37□□□□□ -0.91
NUP50-217ENST00000491860 TGM1P22735 817 aa9.37□□□□□ -0.91
NUP50-217ENST00000491860 WARSP23381 471 aaKnown RBP9.37□□□□□ -0.91
NUP50-217ENST00000491860 ATICP31939 592 aa9.37□□□□□ -0.91
NUP50-217ENST00000491860 ME1P48163 572 aa9.37□□□□□ -0.91
NUP50-217ENST00000491860 CYP4F8P98187 520 aa9.37□□□□□ -0.91
NUP50-217ENST00000491860 FAM160A1Q05DH4 1040 aa9.37□□□□□ -0.91
NUP50-217ENST00000491860 NR1H3Q13133 447 aa9.37□□□□□ -0.91
NUP50-217ENST00000491860 PSMD2Q13200 908 aa9.37□□□□□ -0.91
NUP50-217ENST00000491860 RUNX3Q13761 415 aa9.37□□□□□ -0.91
NUP50-217ENST00000491860 PSMD6Q15008 389 aa9.37□□□□□ -0.91
NUP50-217ENST00000491860 FBXO43Q4G163 708 aa9.37□□□□□ -0.91
NUP50-217ENST00000491860 STXBP5Q5T5C0 1151 aa9.37□□□□□ -0.91
NUP50-217ENST00000491860 LAIR1Q6GTX8 287 aa9.37□□□□□ -0.91
NUP50-217ENST00000491860 FAM171BQ6P995 826 aa9.37□□□□□ -0.91
NUP50-217ENST00000491860 EPM2AIP1Q7L775 607 aaPredicted RBP9.37□□□□□ -0.91
NUP50-217ENST00000491860 LIMS2Q7Z4I7 341 aa9.37□□□□□ -0.91
NUP50-217ENST00000491860 LONP2Q86WA8 852 aa9.37□□□□□ -0.91
NUP50-217ENST00000491860 TMEM130Q8N3G9 435 aa9.37□□□□□ -0.91
NUP50-217ENST00000491860 CPA6Q8N4T0 437 aa9.37□□□□□ -0.91
NUP50-217ENST00000491860 MAB21L3Q8N8X9 362 aa9.37□□□□□ -0.91
NUP50-217ENST00000491860 CXorf38Q8TB03 319 aa9.37□□□□□ -0.91
NUP50-217ENST00000491860 SYAP1Q96A49 352 aaPredicted RBP9.37□□□□□ -0.91
NUP50-217ENST00000491860 RSPRY1Q96DX4 576 aa9.37□□□□□ -0.91
NUP50-217ENST00000491860 SPATA17Q96L03 361 aa9.37□□□□□ -0.91
NUP50-217ENST00000491860 CGRRF1Q99675 332 aa9.37□□□□□ -0.91
NUP50-217ENST00000491860 SYT15Q9BQS2 421 aa9.37□□□□□ -0.91
NUP50-217ENST00000491860 AGPAT3Q9NRZ7 376 aa9.37□□□□□ -0.91
NUP50-217ENST00000491860 FOXD4L1Q9NU39 408 aa9.37□□□□□ -0.91
NUP50-217ENST00000491860 TFIP11Q9UBB9 837 aaKnown RBP9.37□□□□□ -0.91
NUP50-217ENST00000491860 SIX4Q9UIU6 781 aa9.37□□□□□ -0.91
NUP50-217ENST00000491860 GTF3C4Q9UKN8 822 aa9.37□□□□□ -0.91
NUP50-217ENST00000491860 CDV3Q9UKY7 258 aaKnown RBP9.37□□□□□ -0.91
NUP50-217ENST00000491860 MAGED2Q9UNF1 606 aaPredicted RBP9.37□□□□□ -0.91
NUP50-217ENST00000491860 CFAP47Q6ZTR5 3102 aa9.37□□□□□ -0.91
NUP50-217ENST00000491860 ATP8B3O60423 1300 aa9.36□□□□□ -0.91
NUP50-217ENST00000491860 NRG2O14511 850 aaPredicted RBP9.36□□□□□ -0.91
NUP50-217ENST00000491860 POLR2DO15514 142 aaKnown RBP9.36□□□□□ -0.91
NUP50-217ENST00000491860 TACC1O75410 805 aa9.36□□□□□ -0.91
NUP50-217ENST00000491860 PRAMEF12O95522 483 aa9.36□□□□□ -0.91
NUP50-217ENST00000491860 DLATP10515 647 aaKnown RBP9.36□□□□□ -0.91
NUP50-217ENST00000491860 TDGF1P13385 188 aa9.36□□□□□ -0.91
NUP50-217ENST00000491860 TCF3P15923 654 aa9.36□□□□□ -0.91
NUP50-217ENST00000491860 DRD1P21728 446 aa9.36□□□□□ -0.91
NUP50-217ENST00000491860 TNNC1P63316 161 aa9.36□□□□□ -0.91
NUP50-217ENST00000491860 TRPC3Q13507 836 aa9.36□□□□□ -0.91
NUP50-217ENST00000491860 CCINQ13939 588 aa9.36□□□□□ -0.91
NUP50-217ENST00000491860 KCNB1Q14721 858 aa9.36□□□□□ -0.91
NUP50-217ENST00000491860 ST3GAL2Q16842 350 aa9.36□□□□□ -0.91
NUP50-217ENST00000491860 BMT2Q1RMZ1 405 aa9.36□□□□□ -0.91
NUP50-217ENST00000491860 SOWAHAQ2M3V2 549 aa9.36□□□□□ -0.91
NUP50-217ENST00000491860 RESP18Q5W5W9 173 aa9.36□□□□□ -0.91
NUP50-217ENST00000491860 SHC4Q6S5L8 630 aa9.36□□□□□ -0.91
NUP50-217ENST00000491860 DENND5BQ6ZUT9 1274 aa9.36□□□□□ -0.91
NUP50-217ENST00000491860 TRAPPC11Q7Z392 1133 aa9.36□□□□□ -0.91
NUP50-217ENST00000491860 CBWD2Q8IUF1 395 aa9.36□□□□□ -0.91
NUP50-217ENST00000491860 TMEM174Q8WUU8 243 aa9.36□□□□□ -0.91
NUP50-217ENST00000491860 ATP2A3Q93084 1043 aa9.36□□□□□ -0.91
NUP50-217ENST00000491860 CCDC47Q96A33 483 aaKnown RBP9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms