RNA–Protein interactions for RNA: ENST00000491128.5

SMPD4-219, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 2,570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-219ENST00000491128 PARVAQ9NVD7 372 aa14.72□□□□□ -0.05
SMPD4-219ENST00000491128 ATP8B3O60423 1300 aa14.72□□□□□ -0.05
SMPD4-219ENST00000491128 TCRBV7S2A1N4TA0A589 114 aa14.72□□□□□ -0.05
SMPD4-219ENST00000491128 FGGP02679 453 aa14.72□□□□□ -0.05
SMPD4-219ENST00000491128 ITGB8P26012 769 aa14.72□□□□□ -0.05
SMPD4-219ENST00000491128 CDH5P33151 784 aaPredicted RBP14.72□□□□□ -0.05
SMPD4-219ENST00000491128 OR1G1P47890 313 aa14.72□□□□□ -0.05
SMPD4-219ENST00000491128 CFAP221Q4G0U5 840 aa14.72□□□□□ -0.05
SMPD4-219ENST00000491128 TXNRD3NBQ6F5E7 133 aa14.72□□□□□ -0.05
SMPD4-219ENST00000491128 C11orf63Q6NUN7 778 aa14.72□□□□□ -0.05
SMPD4-219ENST00000491128 GLB1LQ6UWU2 654 aa14.72□□□□□ -0.05
SMPD4-219ENST00000491128 XYLT1Q86Y38 959 aa14.72□□□□□ -0.05
SMPD4-219ENST00000491128 LRRC1Q9BTT6 524 aa14.72□□□□□ -0.05
SMPD4-219ENST00000491128 TRAIPQ9BWF2 469 aa14.72□□□□□ -0.05
SMPD4-219ENST00000491128 LHX5Q9H2C1 402 aa14.72□□□□□ -0.05
SMPD4-219ENST00000491128 AVENQ9NQS1 362 aaPredicted RBP14.72□□□□□ -0.05
SMPD4-219ENST00000491128 FRMPD3Q5JV73 1810 aa14.72□□□□□ -0.05
SMPD4-219ENST00000491128 MYBPHLA2RUH7 354 aa14.71□□□□□ -0.05
SMPD4-219ENST00000491128 MTA2O94776 668 aa14.71□□□□□ -0.05
SMPD4-219ENST00000491128 MYBL1P10243 752 aa14.71□□□□□ -0.05
SMPD4-219ENST00000491128 HADHBP55084 474 aaKnown RBP14.71□□□□□ -0.05
SMPD4-219ENST00000491128 PLEKHG4Q58EX7 1191 aa14.71□□□□□ -0.05
SMPD4-219ENST00000491128 SH3PXD2AQ5TCZ1 1133 aa14.71□□□□□ -0.05
SMPD4-219ENST00000491128 OR6B2Q6IFH4 312 aa14.71□□□□□ -0.05
SMPD4-219ENST00000491128 FAM117BQ6P1L5 589 aa14.71□□□□□ -0.05
SMPD4-219ENST00000491128 B3GALNT2Q8NCR0 500 aa14.71□□□□□ -0.05
SMPD4-219ENST00000491128 SELENOOQ9BVL4 669 aa14.71□□□□□ -0.05
SMPD4-219ENST00000491128 PRDM5Q9NQX1 630 aaPredicted RBP14.71□□□□□ -0.05
SMPD4-219ENST00000491128 TCRBV5S1A1TA0A578 114 aa14.71□□□□□ -0.06
SMPD4-219ENST00000491128 DCDC2CA8MYV0 355 aa14.71□□□□□ -0.06
SMPD4-219ENST00000491128 CAND2O75155 1236 aa14.71□□□□□ -0.06
SMPD4-219ENST00000491128 CALB1P05937 261 aa14.71□□□□□ -0.06
SMPD4-219ENST00000491128 KRT3P12035 628 aa14.71□□□□□ -0.06
SMPD4-219ENST00000491128 LCP1P13796 627 aa14.71□□□□□ -0.06
SMPD4-219ENST00000491128 PEX5P50542 639 aa14.71□□□□□ -0.06
SMPD4-219ENST00000491128 TUBB2AQ13885 445 aa14.71□□□□□ -0.06
SMPD4-219ENST00000491128 FAM102AQ5T9C2 384 aaPredicted RBP14.71□□□□□ -0.06
SMPD4-219ENST00000491128 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.71□□□□□ -0.06
SMPD4-219ENST00000491128 CD101Q93033 1021 aa14.71□□□□□ -0.06
SMPD4-219ENST00000491128 TRIM11Q96F44 468 aa14.71□□□□□ -0.06
SMPD4-219ENST00000491128 RNPC3Q96LT9 517 aaKnown RBP14.71□□□□□ -0.06
SMPD4-219ENST00000491128 KRT12Q99456 494 aa14.71□□□□□ -0.06
SMPD4-219ENST00000491128 TUBB2BQ9BVA1 445 aa14.71□□□□□ -0.06
SMPD4-219ENST00000491128 CRTAC1Q9NQ79 661 aa14.71□□□□□ -0.06
SMPD4-219ENST00000491128 TBC1D13Q9NVG8 400 aa14.71□□□□□ -0.06
SMPD4-219ENST00000491128 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.7□□□□□ -0.06
SMPD4-219ENST00000491128 TMEM191CA6NGB0 347 aa14.7□□□□□ -0.06
SMPD4-219ENST00000491128 CACNA2D1P54289 1103 aa14.7□□□□□ -0.06
SMPD4-219ENST00000491128 CKAP4Q07065 602 aaKnown RBP14.7□□□□□ -0.06
SMPD4-219ENST00000491128 TUSC3Q13454 348 aa14.7□□□□□ -0.06
SMPD4-219ENST00000491128 LRRC26Q2I0M4 334 aa14.7□□□□□ -0.06
SMPD4-219ENST00000491128 NOMO2Q5JPE7 1267 aa14.7□□□□□ -0.06
SMPD4-219ENST00000491128 ZFYVE27Q5T4F4 411 aa14.7□□□□□ -0.06
SMPD4-219ENST00000491128 FAM183BPQ6ZVS7 135 aa14.7□□□□□ -0.06
SMPD4-219ENST00000491128 FAXDC2Q96IV6 333 aa14.7□□□□□ -0.06
SMPD4-219ENST00000491128 ZNF518BQ9C0D4 1074 aa14.7□□□□□ -0.06
SMPD4-219ENST00000491128 CRISPLD2Q9H0B8 497 aa14.7□□□□□ -0.06
SMPD4-219ENST00000491128 MRPL47Q9HD33 250 aaKnown RBP14.7□□□□□ -0.06
SMPD4-219ENST00000491128 TMEM30AQ9NV96 361 aa14.7□□□□□ -0.06
SMPD4-219ENST00000491128 SQORQ9Y6N5 450 aa14.7□□□□□ -0.06
SMPD4-219ENST00000491128 RALGAPA2Q2PPJ7 1873 aa14.7□□□□□ -0.06
SMPD4-219ENST00000491128 ZSCAN5CA6NGD5 496 aaPredicted RBP14.7□□□□□ -0.06
SMPD4-219ENST00000491128 PI4K2BG5E9Z4 385 aa14.7□□□□□ -0.06
SMPD4-219ENST00000491128 OR4Q2P0C623 313 aa14.7□□□□□ -0.06
SMPD4-219ENST00000491128 PTPN1P18031 435 aaKnown RBP14.7□□□□□ -0.06
SMPD4-219ENST00000491128 GRIK3Q13003 919 aa14.7□□□□□ -0.06
SMPD4-219ENST00000491128 FBXO46Q6PJ61 603 aaPredicted RBP14.7□□□□□ -0.06
SMPD4-219ENST00000491128 ANKS1BQ7Z6G8 1248 aa14.7□□□□□ -0.06
SMPD4-219ENST00000491128 GSPT2Q8IYD1 628 aaKnown RBP14.7□□□□□ -0.06
SMPD4-219ENST00000491128 FUKQ8N0W3 1084 aa14.7□□□□□ -0.06
SMPD4-219ENST00000491128 VCPIP1Q96JH7 1222 aa14.7□□□□□ -0.06
SMPD4-219ENST00000491128 KCNK16Q96T55 309 aa14.7□□□□□ -0.06
SMPD4-219ENST00000491128 FAM118BQ9BPY3 351 aa14.7□□□□□ -0.06
SMPD4-219ENST00000491128 MED10Q9BTT4 135 aa14.7□□□□□ -0.06
SMPD4-219ENST00000491128 HESX1Q9UBX0 185 aa14.7□□□□□ -0.06
SMPD4-219ENST00000491128 PROSCO94903 275 aa14.69□□□□□ -0.06
SMPD4-219ENST00000491128 SEC31AO94979 1220 aaKnown RBP14.69□□□□□ -0.06
SMPD4-219ENST00000491128 TCEAL1Q15170 157 aa14.69□□□□□ -0.06
SMPD4-219ENST00000491128 CDO1Q16878 200 aa14.69□□□□□ -0.06
SMPD4-219ENST00000491128 LONRF2Q1L5Z9 754 aa14.69□□□□□ -0.06
SMPD4-219ENST00000491128 SMTNL2Q2TAL5 461 aa14.69□□□□□ -0.06
SMPD4-219ENST00000491128 PKDCCQ504Y2 493 aa14.69□□□□□ -0.06
SMPD4-219ENST00000491128 KCNT1Q5JUK3 1230 aa14.69□□□□□ -0.06
SMPD4-219ENST00000491128 TRNP1Q6NT89 227 aa14.69□□□□□ -0.06
SMPD4-219ENST00000491128 PAQR9Q6ZVX9 377 aa14.69□□□□□ -0.06
SMPD4-219ENST00000491128 UNC93AQ86WB7 457 aa14.69□□□□□ -0.06
SMPD4-219ENST00000491128 ZDHHC14Q8IZN3 488 aa14.69□□□□□ -0.06
SMPD4-219ENST00000491128 TOP6BLQ8N6T0 577 aa14.69□□□□□ -0.06
SMPD4-219ENST00000491128 ANKRD7Q92527 254 aa14.69□□□□□ -0.06
SMPD4-219ENST00000491128 HERPUD2Q9BSE4 406 aa14.69□□□□□ -0.06
SMPD4-219ENST00000491128 HEMGNQ9BXL5 484 aa14.69□□□□□ -0.06
SMPD4-219ENST00000491128 DDX47Q9H0S4 455 aaKnown RBP14.69□□□□□ -0.06
SMPD4-219ENST00000491128 TMEM39AQ9NV64 488 aa14.69□□□□□ -0.06
SMPD4-219ENST00000491128 DMGDHQ9UI17 866 aaKnown RBP14.69□□□□□ -0.06
SMPD4-219ENST00000491128 PCDHB7Q9Y5E2 793 aa14.69□□□□□ -0.06
SMPD4-219ENST00000491128 SCINQ9Y6U3 715 aa14.69□□□□□ -0.06
SMPD4-219ENST00000491128 KRIT1O00522 736 aa14.69□□□□□ -0.06
SMPD4-219ENST00000491128 NDUFV1P49821 464 aa14.69□□□□□ -0.06
SMPD4-219ENST00000491128 FAM189BP81408 668 aa14.69□□□□□ -0.06
SMPD4-219ENST00000491128 TRADDQ15628 312 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms