RNA–Protein interactions for RNA: ENST00000490831.1

COL27A1-206, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 3

Gene COL27A1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-206ENST00000490831 SGSM1Q2NKQ1 1148 aa16.25■□□□□ 0.19
COL27A1-206ENST00000490831 ARHGAP15Q53QZ3 475 aa16.25■□□□□ 0.19
COL27A1-206ENST00000490831 ZNF667Q5HYK9 610 aa16.25■□□□□ 0.19
COL27A1-206ENST00000490831 STXBP5Q5T5C0 1151 aa16.25■□□□□ 0.19
COL27A1-206ENST00000490831 VSTM1Q6UX27 236 aa16.25■□□□□ 0.19
COL27A1-206ENST00000490831 VITQ6UXI7 678 aa16.25■□□□□ 0.19
COL27A1-206ENST00000490831 MFSD6LQ8IWD5 586 aa16.25■□□□□ 0.19
COL27A1-206ENST00000490831 ADSSL1Q8N142 457 aa16.25■□□□□ 0.19
COL27A1-206ENST00000490831 FLCNQ8NFG4 579 aa16.25■□□□□ 0.19
COL27A1-206ENST00000490831 DNASE1L2Q92874 299 aa16.25■□□□□ 0.19
COL27A1-206ENST00000490831 MYLPFQ96A32 169 aa16.25■□□□□ 0.19
COL27A1-206ENST00000490831 FAM122AQ96E09 287 aa16.25■□□□□ 0.19
COL27A1-206ENST00000490831 SHDQ96IW2 340 aa16.25■□□□□ 0.19
COL27A1-206ENST00000490831 SLITRK6Q9H5Y7 841 aa16.25■□□□□ 0.19
COL27A1-206ENST00000490831 TASP1Q9H6P5 420 aa16.25■□□□□ 0.19
COL27A1-206ENST00000490831 TBC1D17Q9HA65 648 aa16.25■□□□□ 0.19
COL27A1-206ENST00000490831 TRPV5Q9NQA5 729 aa16.25■□□□□ 0.19
COL27A1-206ENST00000490831 OBP2AQ9NY56 170 aa16.25■□□□□ 0.19
COL27A1-206ENST00000490831 CHMP5Q9NZZ3 219 aa16.25■□□□□ 0.19
COL27A1-206ENST00000490831 MAGEC2Q9UBF1 373 aaPredicted RBP16.25■□□□□ 0.19
COL27A1-206ENST00000490831 NXF1Q9UBU9 619 aaKnown RBP16.25■□□□□ 0.19
COL27A1-206ENST00000490831 GALR2O43603 387 aaPredicted RBP16.24■□□□□ 0.19
COL27A1-206ENST00000490831 PI15O43692 258 aa16.24■□□□□ 0.19
COL27A1-206ENST00000490831 KINO60870 393 aaKnown RBP16.24■□□□□ 0.19
COL27A1-206ENST00000490831 GADD45BO75293 160 aaPredicted RBP16.24■□□□□ 0.19
COL27A1-206ENST00000490831 KRT13P13646 458 aa16.24■□□□□ 0.19
COL27A1-206ENST00000490831 GTF2H1P32780 548 aa16.24■□□□□ 0.19
COL27A1-206ENST00000490831 VIPR2P41587 438 aa16.24■□□□□ 0.19
COL27A1-206ENST00000490831 PTPN5P54829 565 aa16.24■□□□□ 0.19
COL27A1-206ENST00000490831 PPP3CAQ08209 521 aa16.24■□□□□ 0.19
COL27A1-206ENST00000490831 MLF2Q15773 248 aaPredicted RBP16.24■□□□□ 0.19
COL27A1-206ENST00000490831 TAF12Q16514 161 aa16.24■□□□□ 0.19
COL27A1-206ENST00000490831 DDR2Q16832 855 aa16.24■□□□□ 0.19
COL27A1-206ENST00000490831 SLC44A4Q53GD3 710 aa16.24■□□□□ 0.19
COL27A1-206ENST00000490831 GPR158Q5T848 1215 aa16.24■□□□□ 0.19
COL27A1-206ENST00000490831 ARID3BQ8IVW6 561 aaPredicted RBP16.24■□□□□ 0.19
COL27A1-206ENST00000490831 OR6B3Q8NGW1 331 aa16.24■□□□□ 0.19
COL27A1-206ENST00000490831 ERCC4Q92889 916 aaPredicted RBP16.24■□□□□ 0.19
COL27A1-206ENST00000490831 RSPRY1Q96DX4 576 aa16.24■□□□□ 0.19
COL27A1-206ENST00000490831 PCED1BQ96HM7 432 aa16.24■□□□□ 0.19
COL27A1-206ENST00000490831 SPATA17Q96L03 361 aa16.24■□□□□ 0.19
COL27A1-206ENST00000490831 TRMT61BQ9BVS5 477 aaKnown RBP16.24■□□□□ 0.19
COL27A1-206ENST00000490831 SMYD3Q9H7B4 428 aa16.24■□□□□ 0.19
COL27A1-206ENST00000490831 UXTQ9UBK9 157 aaPredicted RBP16.24■□□□□ 0.19
COL27A1-206ENST00000490831 NUP210Q8TEM1 1887 aaPredicted RBP16.24■□□□□ 0.19
COL27A1-206ENST00000490831 DENND4CQ5VZ89 1909 aa16.23■□□□□ 0.19
COL27A1-206ENST00000490831 SLC38A8A6NNN8 435 aa16.23■□□□□ 0.19
COL27A1-206ENST00000490831 HEPACAM2A8MVW5 462 aa16.23■□□□□ 0.19
COL27A1-206ENST00000490831 CETN3O15182 167 aa16.23■□□□□ 0.19
COL27A1-206ENST00000490831 HLA-DRAP01903 254 aa16.23■□□□□ 0.19
COL27A1-206ENST00000490831 P4HA1P13674 534 aa16.23■□□□□ 0.19
COL27A1-206ENST00000490831 PTPN1P18031 435 aaKnown RBP16.23■□□□□ 0.19
COL27A1-206ENST00000490831 DDX6P26196 483 aaKnown RBP eCLIP16.23■□□□□ 0.19
COL27A1-206ENST00000490831 NHLH1Q02575 133 aa16.23■□□□□ 0.19
COL27A1-206ENST00000490831 LRRC63Q05C16 580 aa16.23■□□□□ 0.19
COL27A1-206ENST00000490831 FCHO2Q0JRZ9 810 aa16.23■□□□□ 0.19
COL27A1-206ENST00000490831 GRM2Q14416 872 aa16.23■□□□□ 0.19
COL27A1-206ENST00000490831 SDHAF4Q5VUM1 108 aa16.23■□□□□ 0.19
COL27A1-206ENST00000490831 GCNAQ96QF7 691 aa16.23■□□□□ 0.19
COL27A1-206ENST00000490831 SDCBP2Q9H190 292 aa16.23■□□□□ 0.19
COL27A1-206ENST00000490831 DPEP3Q9H4B8 488 aa16.23■□□□□ 0.19
COL27A1-206ENST00000490831 COL4A2P08572 1712 aa16.22■□□□□ 0.19
COL27A1-206ENST00000490831 GREB1Q4ZG55 1949 aa16.22■□□□□ 0.19
COL27A1-206ENST00000490831 SHISA7A6NL88 538 aa16.22■□□□□ 0.19
COL27A1-206ENST00000490831 A8MXQ7 604 aa16.22■□□□□ 0.19
COL27A1-206ENST00000490831 ARNTLO00327 626 aa16.22■□□□□ 0.19
COL27A1-206ENST00000490831 SLC16A3O15427 465 aaKnown RBP16.22■□□□□ 0.19
COL27A1-206ENST00000490831 TADA3O75528 432 aa16.22■□□□□ 0.19
COL27A1-206ENST00000490831 TRIM49P0CI25 452 aa16.22■□□□□ 0.19
COL27A1-206ENST00000490831 TRIM49CP0CI26 452 aa16.22■□□□□ 0.19
COL27A1-206ENST00000490831 BDNFP23560 247 aa16.22■□□□□ 0.19
COL27A1-206ENST00000490831 PPP1R2P41236 205 aa16.22■□□□□ 0.19
COL27A1-206ENST00000490831 GCLMP48507 274 aa16.22■□□□□ 0.19
COL27A1-206ENST00000490831 PMS1P54277 932 aaKnown RBP16.22■□□□□ 0.19
COL27A1-206ENST00000490831 CDH8P55286 799 aa16.22■□□□□ 0.19
COL27A1-206ENST00000490831 CYP4F8P98187 520 aa16.22■□□□□ 0.19
COL27A1-206ENST00000490831 FKBP3Q00688 224 aaKnown RBP16.22■□□□□ 0.19
COL27A1-206ENST00000490831 MDH1BQ5I0G3 518 aa16.22■□□□□ 0.19
COL27A1-206ENST00000490831 ANKRD40Q6AI12 368 aa16.22■□□□□ 0.19
COL27A1-206ENST00000490831 FOXR2Q6PJQ5 311 aa16.22■□□□□ 0.19
COL27A1-206ENST00000490831 CCDC105Q8IYK2 499 aa16.22■□□□□ 0.19
COL27A1-206ENST00000490831 B3GALNT2Q8NCR0 500 aa16.22■□□□□ 0.19
COL27A1-206ENST00000490831 STKLD1Q8NE28 680 aa16.22■□□□□ 0.19
COL27A1-206ENST00000490831 IRF7Q92985 503 aa16.22■□□□□ 0.19
COL27A1-206ENST00000490831 C8orf48Q96LL4 319 aa16.22■□□□□ 0.19
COL27A1-206ENST00000490831 SLC46A2Q9BY10 475 aa16.22■□□□□ 0.19
COL27A1-206ENST00000490831 BCO2Q9BYV7 579 aa16.22■□□□□ 0.19
COL27A1-206ENST00000490831 OSBPL6Q9BZF3 934 aa16.22■□□□□ 0.19
COL27A1-206ENST00000490831 BRD9Q9H8M2 597 aa16.22■□□□□ 0.19
COL27A1-206ENST00000490831 TMEM8AQ9HCN3 771 aa16.22■□□□□ 0.19
COL27A1-206ENST00000490831 DLGAP2Q9P1A6 1054 aa16.22■□□□□ 0.19
COL27A1-206ENST00000490831 MAN1B1Q9UKM7 699 aa16.22■□□□□ 0.19
COL27A1-206ENST00000490831 OBSL1O75147 1896 aa16.21■□□□□ 0.19
COL27A1-206ENST00000490831 KANSL1LA0AUZ9 987 aa16.21■□□□□ 0.19
COL27A1-206ENST00000490831 TRIM66O15016 1216 aa16.21■□□□□ 0.19
COL27A1-206ENST00000490831 CHADO15335 359 aa16.21■□□□□ 0.19
COL27A1-206ENST00000490831 PRAMEF12O95522 483 aa16.21■□□□□ 0.19
COL27A1-206ENST00000490831 EPB41P11171 864 aaKnown RBP16.21■□□□□ 0.19
COL27A1-206ENST00000490831 BMP6P22004 513 aa16.21■□□□□ 0.19
COL27A1-206ENST00000490831 CCNE1P24864 410 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms