RNA–Protein interactions for RNA: ENST00000490432.1

TAF1B-208, Transcript of TATA-box binding protein associated factor, RNA polymerase I subunit B, human

TSL 3

Gene TAF1B, Length 620 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TAF1B-208	ENST00000490432	SMARCD2	Q92925	531 aa		13.25	□□□□□ -0.29
TAF1B-208	ENST00000490432	PCED1B	Q96HM7	432 aa		13.25	□□□□□ -0.29
TAF1B-208	ENST00000490432	DUSP9	Q99956	384 aa	Known RBP	13.25	□□□□□ -0.29
TAF1B-208	ENST00000490432	GTPBP4	Q9BZE4	634 aa	Known RBP	13.25	□□□□□ -0.29
TAF1B-208	ENST00000490432	TMEM8A	Q9HCN3	771 aa		13.25	□□□□□ -0.29
TAF1B-208	ENST00000490432	MIA3	Q5JRA6	1907 aa		13.25	□□□□□ -0.29
TAF1B-208	ENST00000490432	PRAMEF12	O95522	483 aa		13.24	□□□□□ -0.29
TAF1B-208	ENST00000490432	AOC1	P19801	751 aa		13.24	□□□□□ -0.29
TAF1B-208	ENST00000490432	CCNE1	P24864	410 aa		13.24	□□□□□ -0.29
TAF1B-208	ENST00000490432	GABRR2	P28476	465 aa		13.24	□□□□□ -0.29
TAF1B-208	ENST00000490432	AVPR2	P30518	371 aa		13.24	□□□□□ -0.29
TAF1B-208	ENST00000490432	GTF2H1	P32780	548 aa		13.24	□□□□□ -0.29
TAF1B-208	ENST00000490432	RAP1GAP	P47736	663 aa		13.24	□□□□□ -0.29
TAF1B-208	ENST00000490432	GCLM	P48507	274 aa		13.24	□□□□□ -0.29
TAF1B-208	ENST00000490432	CLCN5	P51795	746 aa		13.24	□□□□□ -0.29
TAF1B-208	ENST00000490432	CDH8	P55286	799 aa		13.24	□□□□□ -0.29
TAF1B-208	ENST00000490432	NLRP12	P59046	1061 aa		13.24	□□□□□ -0.29
TAF1B-208	ENST00000490432	STARD6	P59095	220 aa		13.24	□□□□□ -0.29
TAF1B-208	ENST00000490432	FCHO2	Q0JRZ9	810 aa		13.24	□□□□□ -0.29
TAF1B-208	ENST00000490432	INCA1	Q0VD86	236 aa		13.24	□□□□□ -0.29
TAF1B-208	ENST00000490432	BIRC3	Q13489	604 aa		13.24	□□□□□ -0.29
TAF1B-208	ENST00000490432	TRPC3	Q13507	836 aa		13.24	□□□□□ -0.29
TAF1B-208	ENST00000490432	DDR2	Q16832	855 aa		13.24	□□□□□ -0.29
TAF1B-208	ENST00000490432	SDHAF4	Q5VUM1	108 aa		13.24	□□□□□ -0.29
TAF1B-208	ENST00000490432	SPOPL	Q6IQ16	392 aa		13.24	□□□□□ -0.29
TAF1B-208	ENST00000490432	PHLDB3	Q6NSJ2	640 aa		13.24	□□□□□ -0.29
TAF1B-208	ENST00000490432	VSTM1	Q6UX27	236 aa		13.24	□□□□□ -0.29
TAF1B-208	ENST00000490432	PAQR9	Q6ZVX9	377 aa		13.24	□□□□□ -0.29
TAF1B-208	ENST00000490432	SIX5	Q8N196	739 aa		13.24	□□□□□ -0.29
TAF1B-208	ENST00000490432	B3GALNT2	Q8NCR0	500 aa		13.24	□□□□□ -0.29
TAF1B-208	ENST00000490432	ZSCAN18	Q8TBC5	510 aa	Predicted RBP	13.24	□□□□□ -0.29
TAF1B-208	ENST00000490432	GIPC2	Q8TF65	315 aa		13.24	□□□□□ -0.29
TAF1B-208	ENST00000490432	EEF2KMT	Q96G04	330 aa		13.24	□□□□□ -0.29
TAF1B-208	ENST00000490432	SPATA17	Q96L03	361 aa		13.24	□□□□□ -0.29
TAF1B-208	ENST00000490432	CEP295NL	Q96MC4	621 aa		13.24	□□□□□ -0.29
TAF1B-208	ENST00000490432	LRRC3B	Q96PB8	259 aa		13.24	□□□□□ -0.29
TAF1B-208	ENST00000490432	MMS19	Q96T76	1030 aa		13.24	□□□□□ -0.29
TAF1B-208	ENST00000490432	TTLL2	Q9BWV7	592 aa		13.24	□□□□□ -0.29
TAF1B-208	ENST00000490432	GPR88	Q9GZN0	384 aa		13.24	□□□□□ -0.29
TAF1B-208	ENST00000490432	TRPV5	Q9NQA5	729 aa		13.24	□□□□□ -0.29
TAF1B-208	ENST00000490432	ARHGEF3	Q9NR81	526 aa		13.24	□□□□□ -0.29
TAF1B-208	ENST00000490432	DLGAP2	Q9P1A6	1054 aa		13.24	□□□□□ -0.29
TAF1B-208	ENST00000490432	NXF1	Q9UBU9	619 aa	Known RBP	13.24	□□□□□ -0.29
TAF1B-208	ENST00000490432	HMGXB4	Q9UGU5	601 aa		13.24	□□□□□ -0.29
TAF1B-208	ENST00000490432	HCN4	Q9Y3Q4	1203 aa		13.24	□□□□□ -0.29
TAF1B-208	ENST00000490432	SLC38A8	A6NNN8	435 aa		13.23	□□□□□ -0.29
TAF1B-208	ENST00000490432	PDGFRB	P09619	1106 aa		13.23	□□□□□ -0.29
TAF1B-208	ENST00000490432	CSH1	P0DML2	217 aa		13.23	□□□□□ -0.29
TAF1B-208	ENST00000490432	CSH2	P0DML3	217 aa		13.23	□□□□□ -0.29
TAF1B-208	ENST00000490432	PTPN1	P18031	435 aa	Known RBP	13.23	□□□□□ -0.29
TAF1B-208	ENST00000490432	CDC25C	P30307	473 aa		13.23	□□□□□ -0.29
TAF1B-208	ENST00000490432	GNL1	P36915	607 aa	Predicted RBP	13.23	□□□□□ -0.29
TAF1B-208	ENST00000490432	NOP14	P78316	857 aa	Known RBP	13.23	□□□□□ -0.29
TAF1B-208	ENST00000490432	CYP4F8	P98187	520 aa		13.23	□□□□□ -0.29
TAF1B-208	ENST00000490432	TCF15	Q12870	199 aa		13.23	□□□□□ -0.29
TAF1B-208	ENST00000490432	VEPH1	Q14D04	833 aa		13.23	□□□□□ -0.29
TAF1B-208	ENST00000490432	MAPRE1	Q15691	268 aa	Known RBP	13.23	□□□□□ -0.29
TAF1B-208	ENST00000490432	SGSM1	Q2NKQ1	1148 aa		13.23	□□□□□ -0.29
TAF1B-208	ENST00000490432	CBWD6	Q4V339	395 aa		13.23	□□□□□ -0.29
TAF1B-208	ENST00000490432	ZNF667	Q5HYK9	610 aa		13.23	□□□□□ -0.29
TAF1B-208	ENST00000490432	MDH1B	Q5I0G3	518 aa		13.23	□□□□□ -0.29
TAF1B-208	ENST00000490432	CBWD3	Q5JTY5	395 aa		13.23	□□□□□ -0.29
TAF1B-208	ENST00000490432	CBWD5	Q5RIA9	395 aa		13.23	□□□□□ -0.29
TAF1B-208	ENST00000490432	ASTL	Q6HA08	431 aa	Predicted RBP	13.23	□□□□□ -0.29
TAF1B-208	ENST00000490432	C4orf50	Q6ZRC1	276 aa		13.23	□□□□□ -0.29
TAF1B-208	ENST00000490432	SPATA2L	Q8IUW3	424 aa	Predicted RBP	13.23	□□□□□ -0.29
TAF1B-208	ENST00000490432	SUGP1	Q8IWZ8	645 aa	Known RBP	13.23	□□□□□ -0.29
TAF1B-208	ENST00000490432	ZNF687	Q8N1G0	1237 aa		13.23	□□□□□ -0.29
TAF1B-208	ENST00000490432	OR6B3	Q8NGW1	331 aa		13.23	□□□□□ -0.29
TAF1B-208	ENST00000490432	RIN3	Q8TB24	985 aa		13.23	□□□□□ -0.29
TAF1B-208	ENST00000490432	WHAMM	Q8TF30	809 aa		13.23	□□□□□ -0.29
TAF1B-208	ENST00000490432	SEMA4D	Q92854	862 aa		13.23	□□□□□ -0.29
TAF1B-208	ENST00000490432	SLC35C1	Q96A29	364 aa		13.23	□□□□□ -0.29
TAF1B-208	ENST00000490432	DHTKD1	Q96HY7	919 aa	Predicted RBP	13.23	□□□□□ -0.29
TAF1B-208	ENST00000490432	MED15	Q96RN5	788 aa		13.23	□□□□□ -0.29
TAF1B-208	ENST00000490432	B3GNT5	Q9BYG0	378 aa		13.23	□□□□□ -0.29
TAF1B-208	ENST00000490432	ZFP14	Q9HCL3	533 aa		13.23	□□□□□ -0.29
TAF1B-208	ENST00000490432	OBP2A	Q9NY56	170 aa		13.23	□□□□□ -0.29
TAF1B-208	ENST00000490432	HOOK1	Q9UJC3	728 aa	Known RBP	13.23	□□□□□ -0.29
TAF1B-208	ENST00000490432	COQ4	Q9Y3A0	265 aa		13.23	□□□□□ -0.29
TAF1B-208	ENST00000490432	SOBP	A7XYQ1	873 aa		13.22	□□□□□ -0.29
TAF1B-208	ENST00000490432	TULP1	O00294	542 aa	Predicted RBP	13.22	□□□□□ -0.29
TAF1B-208	ENST00000490432	CETN3	O15182	167 aa		13.22	□□□□□ -0.29
TAF1B-208	ENST00000490432	PI15	O43692	258 aa		13.22	□□□□□ -0.29
TAF1B-208	ENST00000490432	PHACTR2	O75167	634 aa		13.22	□□□□□ -0.29
TAF1B-208	ENST00000490432	ANP32A	P39687	249 aa	Known RBP	13.22	□□□□□ -0.29
TAF1B-208	ENST00000490432	VIPR2	P41587	438 aa		13.22	□□□□□ -0.29
TAF1B-208	ENST00000490432	PIK3CA	P42336	1068 aa		13.22	□□□□□ -0.29
TAF1B-208	ENST00000490432	NUBP1	P53384	320 aa		13.22	□□□□□ -0.29
TAF1B-208	ENST00000490432	USP46	P62068	366 aa		13.22	□□□□□ -0.29
TAF1B-208	ENST00000490432	RPL10A	P62906	217 aa	Known RBP	13.22	□□□□□ -0.29
TAF1B-208	ENST00000490432	FKBP3	Q00688	224 aa	Known RBP	13.22	□□□□□ -0.29
TAF1B-208	ENST00000490432	SCARA5	Q6ZMJ2	495 aa		13.22	□□□□□ -0.29
TAF1B-208	ENST00000490432	CRYBG2	Q8N1P7	616 aa		13.22	□□□□□ -0.29
TAF1B-208	ENST00000490432	DEPDC1B	Q8WUY9	529 aa		13.22	□□□□□ -0.29
TAF1B-208	ENST00000490432	DNASE1L2	Q92874	299 aa		13.22	□□□□□ -0.29
TAF1B-208	ENST00000490432	C8orf48	Q96LL4	319 aa		13.22	□□□□□ -0.29
TAF1B-208	ENST00000490432	TWNK	Q96RR1	684 aa		13.22	□□□□□ -0.29
TAF1B-208	ENST00000490432	SLC46A2	Q9BY10	475 aa		13.22	□□□□□ -0.29
TAF1B-208	ENST00000490432	ZNF518B	Q9C0D4	1074 aa		13.22	□□□□□ -0.29

Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms