RNA–Protein interactions for RNA: ENST00000490283.1

SEC13-218, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-218ENST00000490283 NCOA4Q13772 614 aa18.65■□□□□ 0.58
SEC13-218ENST00000490283 ANGPT1Q15389 498 aa18.65■□□□□ 0.58
SEC13-218ENST00000490283 ZNF667Q5HYK9 610 aa18.65■□□□□ 0.58
SEC13-218ENST00000490283 FAM171BQ6P995 826 aa18.65■□□□□ 0.58
SEC13-218ENST00000490283 VSTM1Q6UX27 236 aa18.65■□□□□ 0.58
SEC13-218ENST00000490283 TMC2Q8TDI7 906 aa18.65■□□□□ 0.58
SEC13-218ENST00000490283 CSGALNACT1Q8TDX6 532 aa18.65■□□□□ 0.58
SEC13-218ENST00000490283 DDX23Q9BUQ8 820 aaKnown RBP18.65■□□□□ 0.58
SEC13-218ENST00000490283 TRPV5Q9NQA5 729 aa18.65■□□□□ 0.58
SEC13-218ENST00000490283 OBP2AQ9NY56 170 aa18.65■□□□□ 0.58
SEC13-218ENST00000490283 MAPK8IP1Q9UQF2 711 aa18.65■□□□□ 0.58
SEC13-218ENST00000490283 FAM170BA6NMN3 283 aa18.64■□□□□ 0.57
SEC13-218ENST00000490283 A8MXQ7 604 aa18.64■□□□□ 0.57
SEC13-218ENST00000490283 HCRTO43612 131 aa18.64■□□□□ 0.57
SEC13-218ENST00000490283 SMC2O95347 1197 aa18.64■□□□□ 0.57
SEC13-218ENST00000490283 WEE1P30291 646 aa18.64■□□□□ 0.57
SEC13-218ENST00000490283 MAGEA9P43362 315 aa18.64■□□□□ 0.57
SEC13-218ENST00000490283 MAGEA11P43364 429 aa18.64■□□□□ 0.57
SEC13-218ENST00000490283 NLRP12P59046 1061 aa18.64■□□□□ 0.57
SEC13-218ENST00000490283 CLDN10P78369 228 aa18.64■□□□□ 0.57
SEC13-218ENST00000490283 SDHAF4Q5VUM1 108 aa18.64■□□□□ 0.57
SEC13-218ENST00000490283 TDRD10Q5VZ19 366 aaKnown RBP18.64■□□□□ 0.57
SEC13-218ENST00000490283 MYLPFQ96A32 169 aa18.64■□□□□ 0.57
SEC13-218ENST00000490283 MRPL45Q9BRJ2 306 aaKnown RBP18.64■□□□□ 0.57
SEC13-218ENST00000490283 GZF1Q9H116 711 aaPredicted RBP18.64■□□□□ 0.57
SEC13-218ENST00000490283 IL21Q9HBE4 155 aa18.64■□□□□ 0.57
SEC13-218ENST00000490283 LTB4R2Q9NPC1 389 aa18.64■□□□□ 0.57
SEC13-218ENST00000490283 THG1LQ9NWX6 298 aaKnown RBP18.64■□□□□ 0.57
SEC13-218ENST00000490283 EHD2Q9NZN4 543 aa18.64■□□□□ 0.57
SEC13-218ENST00000490283 SLC38A8A6NNN8 435 aa18.63■□□□□ 0.57
SEC13-218ENST00000490283 SOBPA7XYQ1 873 aa18.63■□□□□ 0.57
SEC13-218ENST00000490283 IKBKBO14920 756 aa18.63■□□□□ 0.57
SEC13-218ENST00000490283 MAPK13O15264 365 aa18.63■□□□□ 0.57
SEC13-218ENST00000490283 CHADO15335 359 aa18.63■□□□□ 0.57
SEC13-218ENST00000490283 ATP2C2O75185 946 aa18.63■□□□□ 0.57
SEC13-218ENST00000490283 NOL4O94818 638 aa18.63■□□□□ 0.57
SEC13-218ENST00000490283 HMGA1P17096 107 aaKnown RBP18.63■□□□□ 0.57
SEC13-218ENST00000490283 TRIM21P19474 475 aaKnown RBP18.63■□□□□ 0.57
SEC13-218ENST00000490283 GRIK1P39086 918 aa18.63■□□□□ 0.57
SEC13-218ENST00000490283 FAM160A1Q05DH4 1040 aa18.63■□□□□ 0.57
SEC13-218ENST00000490283 NFIL3Q16649 462 aa18.63■□□□□ 0.57
SEC13-218ENST00000490283 ARHGAP29Q52LW3 1261 aa18.63■□□□□ 0.57
SEC13-218ENST00000490283 MDH1BQ5I0G3 518 aa18.63■□□□□ 0.57
SEC13-218ENST00000490283 C1orf228Q6PIY5 440 aa18.63■□□□□ 0.57
SEC13-218ENST00000490283 INTS8Q75QN2 995 aaKnown RBP18.63■□□□□ 0.57
SEC13-218ENST00000490283 FMR1NBQ8N0W7 255 aaPredicted RBP18.63■□□□□ 0.57
SEC13-218ENST00000490283 CELF5Q8N6W0 485 aaKnown RBP18.63■□□□□ 0.57
SEC13-218ENST00000490283 MYCBPAPQ8TBZ2 947 aa18.63■□□□□ 0.57
SEC13-218ENST00000490283 PLEKHO2Q8TD55 490 aa18.63■□□□□ 0.57
SEC13-218ENST00000490283 TRMT2BQ96GJ1 504 aaKnown RBP18.63■□□□□ 0.57
SEC13-218ENST00000490283 CEP295NLQ96MC4 621 aa18.63■□□□□ 0.57
SEC13-218ENST00000490283 MKNK1Q9BUB5 465 aa18.63■□□□□ 0.57
SEC13-218ENST00000490283 GTPBP4Q9BZE4 634 aaKnown RBP18.63■□□□□ 0.57
SEC13-218ENST00000490283 IMPG2Q9BZV3 1241 aa18.63■□□□□ 0.57
SEC13-218ENST00000490283 XYLT2Q9H1B5 865 aa18.63■□□□□ 0.57
SEC13-218ENST00000490283 VRTNQ9H8Y1 702 aa18.63■□□□□ 0.57
SEC13-218ENST00000490283 CRTAC1Q9NQ79 661 aa18.63■□□□□ 0.57
SEC13-218ENST00000490283 PIAS3Q9Y6X2 628 aa18.63■□□□□ 0.57
SEC13-218ENST00000490283 TRIM66O15016 1216 aa18.62■□□□□ 0.57
SEC13-218ENST00000490283 F11P03951 625 aa18.62■□□□□ 0.57
SEC13-218ENST00000490283 C4BPAP04003 597 aaKnown RBP18.62■□□□□ 0.57
SEC13-218ENST00000490283 GLULP15104 373 aa18.62■□□□□ 0.57
SEC13-218ENST00000490283 CD72P21854 359 aa18.62■□□□□ 0.57
SEC13-218ENST00000490283 BDNFP23560 247 aa18.62■□□□□ 0.57
SEC13-218ENST00000490283 PIK3CAP42336 1068 aa18.62■□□□□ 0.57
SEC13-218ENST00000490283 VAMP7P51809 220 aa18.62■□□□□ 0.57
SEC13-218ENST00000490283 PLCB2Q00722 1185 aa18.62■□□□□ 0.57
SEC13-218ENST00000490283 FCHO2Q0JRZ9 810 aa18.62■□□□□ 0.57
SEC13-218ENST00000490283 PNOCQ13519 176 aa18.62■□□□□ 0.57
SEC13-218ENST00000490283 CCDC142Q17RM4 750 aa18.62■□□□□ 0.57
SEC13-218ENST00000490283 SGSM1Q2NKQ1 1148 aa18.62■□□□□ 0.57
SEC13-218ENST00000490283 GPIHBP1Q8IV16 184 aa18.62■□□□□ 0.57
SEC13-218ENST00000490283 FAM186BQ8IYM0 893 aa18.62■□□□□ 0.57
SEC13-218ENST00000490283 CMTM8Q8IZV2 173 aa18.62■□□□□ 0.57
SEC13-218ENST00000490283 BPIFB1Q8TDL5 484 aa18.62■□□□□ 0.57
SEC13-218ENST00000490283 TAF4BQ92750 862 aa18.62■□□□□ 0.57
SEC13-218ENST00000490283 MSANTD3Q96H12 275 aa18.62■□□□□ 0.57
SEC13-218ENST00000490283 PCED1BQ96HM7 432 aa18.62■□□□□ 0.57
SEC13-218ENST00000490283 KIF9Q9HAQ2 790 aa18.62■□□□□ 0.57
SEC13-218ENST00000490283 ATP8B3O60423 1300 aa18.62■□□□□ 0.57
SEC13-218ENST00000490283 PRAMEF12O95522 483 aa18.61■□□□□ 0.57
SEC13-218ENST00000490283 PTPN1P18031 435 aaKnown RBP18.61■□□□□ 0.57
SEC13-218ENST00000490283 PSMC2P35998 433 aaKnown RBP18.61■□□□□ 0.57
SEC13-218ENST00000490283 KPNA1P52294 538 aaPredicted RBP18.61■□□□□ 0.57
SEC13-218ENST00000490283 DLG4P78352 724 aa18.61■□□□□ 0.57
SEC13-218ENST00000490283 ADAM9Q13443 819 aa18.61■□□□□ 0.57
SEC13-218ENST00000490283 ZACNQ401N2 412 aa18.61■□□□□ 0.57
SEC13-218ENST00000490283 SCARA5Q6ZMJ2 495 aa18.61■□□□□ 0.57
SEC13-218ENST00000490283 C1orf210Q8IVY1 113 aa18.61■□□□□ 0.57
SEC13-218ENST00000490283 MAB21L3Q8N8X9 362 aa18.61■□□□□ 0.57
SEC13-218ENST00000490283 CCDC150Q8NCX0 1101 aa18.61■□□□□ 0.57
SEC13-218ENST00000490283 STKLD1Q8NE28 680 aa18.61■□□□□ 0.57
SEC13-218ENST00000490283 SMARCE1Q969G3 411 aa18.61■□□□□ 0.57
SEC13-218ENST00000490283 TNIP3Q96KP6 325 aa18.61■□□□□ 0.57
SEC13-218ENST00000490283 SPATA17Q96L03 361 aa18.61■□□□□ 0.57
SEC13-218ENST00000490283 MYRFLQ96LU7 910 aa18.61■□□□□ 0.57
SEC13-218ENST00000490283 GSDMAQ96QA5 445 aa18.61■□□□□ 0.57
SEC13-218ENST00000490283 PHOX2BQ99453 314 aa18.61■□□□□ 0.57
SEC13-218ENST00000490283 TSG101Q99816 390 aa18.61■□□□□ 0.57
SEC13-218ENST00000490283 SLC46A2Q9BY10 475 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms