RNA–Protein interactions for RNA: ENST00000489656.5

VPS26A-205, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-205ENST00000489656 THEM5Q8N1Q8 247 aa14.99□□□□□ -0.01
VPS26A-205ENST00000489656 ANKRD52Q8NB46 1076 aa14.99□□□□□ -0.01
VPS26A-205ENST00000489656 MSANTD4Q8NCY6 345 aa14.99□□□□□ -0.01
VPS26A-205ENST00000489656 TPCN2Q8NHX9 752 aa14.99□□□□□ -0.01
VPS26A-205ENST00000489656 KIF18AQ8NI77 898 aa14.99□□□□□ -0.01
VPS26A-205ENST00000489656 SLC35G2Q8TBE7 412 aa14.99□□□□□ -0.01
VPS26A-205ENST00000489656 ALS2CR12Q96Q35 445 aa14.99□□□□□ -0.01
VPS26A-205ENST00000489656 PKMYT1Q99640 499 aa14.99□□□□□ -0.01
VPS26A-205ENST00000489656 CRTAC1Q9NQ79 661 aa14.99□□□□□ -0.01
VPS26A-205ENST00000489656 FAM49BQ9NUQ9 324 aa14.99□□□□□ -0.01
VPS26A-205ENST00000489656 HCSTQ9UBK5 93 aa14.99□□□□□ -0.01
VPS26A-205ENST00000489656 HESX1Q9UBX0 185 aa14.99□□□□□ -0.01
VPS26A-205ENST00000489656 CNOT8Q9UFF9 292 aaKnown RBP14.99□□□□□ -0.01
VPS26A-205ENST00000489656 CYTH4Q9UIA0 394 aa14.99□□□□□ -0.01
VPS26A-205ENST00000489656 STRIP2Q9ULQ0 834 aa14.99□□□□□ -0.01
VPS26A-205ENST00000489656 TIMM13Q9Y5L4 95 aaPredicted RBP14.99□□□□□ -0.01
VPS26A-205ENST00000489656 FANCGO15287 622 aa14.98□□□□□ -0.01
VPS26A-205ENST00000489656 BUB1O43683 1085 aa14.98□□□□□ -0.01
VPS26A-205ENST00000489656 CCDC130P13994 396 aa14.98□□□□□ -0.01
VPS26A-205ENST00000489656 FGFR3P22607 806 aa14.98□□□□□ -0.01
VPS26A-205ENST00000489656 ACAT1P24752 427 aaKnown RBP14.98□□□□□ -0.01
VPS26A-205ENST00000489656 RPL34P49207 117 aaKnown RBP14.98□□□□□ -0.01
VPS26A-205ENST00000489656 PSMC1P62191 440 aaKnown RBP14.98□□□□□ -0.01
VPS26A-205ENST00000489656 YWHAHQ04917 246 aaPredicted RBP14.98□□□□□ -0.01
VPS26A-205ENST00000489656 BST2Q10589 180 aaKnown RBP14.98□□□□□ -0.01
VPS26A-205ENST00000489656 PDCLQ13371 301 aa14.98□□□□□ -0.01
VPS26A-205ENST00000489656 MRPL58Q14197 206 aaKnown RBP14.98□□□□□ -0.01
VPS26A-205ENST00000489656 PTPN20Q4JDL3 420 aa14.98□□□□□ -0.01
VPS26A-205ENST00000489656 INTS6LQ5JSJ4 861 aaKnown RBP14.98□□□□□ -0.01
VPS26A-205ENST00000489656 DNTTIP2Q5QJE6 756 aaKnown RBP14.98□□□□□ -0.01
VPS26A-205ENST00000489656 PLEKHA7Q6IQ23 1121 aa14.98□□□□□ -0.01
VPS26A-205ENST00000489656 FUT10Q6P4F1 479 aa14.98□□□□□ -0.01
VPS26A-205ENST00000489656 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.98□□□□□ -0.01
VPS26A-205ENST00000489656 MMS22LQ6ZRQ5 1243 aa14.98□□□□□ -0.01
VPS26A-205ENST00000489656 OTOP2Q7RTS6 562 aa14.98□□□□□ -0.01
VPS26A-205ENST00000489656 SLFN11Q7Z7L1 901 aa14.98□□□□□ -0.01
VPS26A-205ENST00000489656 FUKQ8N0W3 1084 aa14.98□□□□□ -0.01
VPS26A-205ENST00000489656 LRRC57Q8N9N7 239 aa14.98□□□□□ -0.01
VPS26A-205ENST00000489656 MYCBPAPQ8TBZ2 947 aa14.98□□□□□ -0.01
VPS26A-205ENST00000489656 SLC35F5Q8WV83 523 aa14.98□□□□□ -0.01
VPS26A-205ENST00000489656 UBE2Q2Q8WVN8 375 aa14.98□□□□□ -0.01
VPS26A-205ENST00000489656 HERVK_113Q902F9 699 aa14.98□□□□□ -0.01
VPS26A-205ENST00000489656 ABHD8Q96I13 439 aa14.98□□□□□ -0.01
VPS26A-205ENST00000489656 C11orf70Q9BRQ4 267 aa14.98□□□□□ -0.01
VPS26A-205ENST00000489656 OXCT2Q9BYC2 517 aaPredicted RBP14.98□□□□□ -0.01
VPS26A-205ENST00000489656 MIS12Q9H081 205 aa14.98□□□□□ -0.01
VPS26A-205ENST00000489656 DNAI1Q9UI46 699 aa14.98□□□□□ -0.01
VPS26A-205ENST00000489656 SCINQ9Y6U3 715 aa14.98□□□□□ -0.01
VPS26A-205ENST00000489656 PLXNA3P51805 1871 aa14.97□□□□□ -0.01
VPS26A-205ENST00000489656 TCRBV5S1A1TA0A578 114 aa14.97□□□□□ -0.01
VPS26A-205ENST00000489656 GRID2IPA4D2P6 1211 aa14.97□□□□□ -0.01
VPS26A-205ENST00000489656 ATP2C2O75185 946 aa14.97□□□□□ -0.01
VPS26A-205ENST00000489656 GJB5O95377 273 aa14.97□□□□□ -0.01
VPS26A-205ENST00000489656 LAG3P18627 525 aa14.97□□□□□ -0.01
VPS26A-205ENST00000489656 RRM1P23921 792 aa14.97□□□□□ -0.01
VPS26A-205ENST00000489656 TKTP29401 623 aaKnown RBP14.97□□□□□ -0.01
VPS26A-205ENST00000489656 CASQ1P31415 396 aa14.97□□□□□ -0.01
VPS26A-205ENST00000489656 NOP2P46087 812 aaKnown RBP14.97□□□□□ -0.01
VPS26A-205ENST00000489656 ALDH7A1P49419 539 aaKnown RBP14.97□□□□□ -0.01
VPS26A-205ENST00000489656 EPHB4P54760 987 aa14.97□□□□□ -0.01
VPS26A-205ENST00000489656 TSPY1Q01534 308 aa14.97□□□□□ -0.01
VPS26A-205ENST00000489656 MAPRE1Q15691 268 aaKnown RBP14.97□□□□□ -0.01
VPS26A-205ENST00000489656 MDH1BQ5I0G3 518 aa14.97□□□□□ -0.01
VPS26A-205ENST00000489656 PAQR9Q6ZVX9 377 aa14.97□□□□□ -0.01
VPS26A-205ENST00000489656 RNF168Q8IYW5 571 aaPredicted RBP14.97□□□□□ -0.01
VPS26A-205ENST00000489656 UBA3Q8TBC4 463 aa14.97□□□□□ -0.01
VPS26A-205ENST00000489656 ZNF564Q8TBZ8 553 aaPredicted RBP14.97□□□□□ -0.01
VPS26A-205ENST00000489656 SLC2A14Q8TDB8 520 aa14.97□□□□□ -0.01
VPS26A-205ENST00000489656 SLC9A7Q96T83 725 aa14.97□□□□□ -0.01
VPS26A-205ENST00000489656 LPIN3Q9BQK8 851 aa14.97□□□□□ -0.01
VPS26A-205ENST00000489656 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.97□□□□□ -0.01
VPS26A-205ENST00000489656 NUP85Q9BW27 656 aa14.97□□□□□ -0.01
VPS26A-205ENST00000489656 SLC4A5Q9BY07 1137 aa14.97□□□□□ -0.01
VPS26A-205ENST00000489656 DUSP16Q9BY84 665 aa14.97□□□□□ -0.01
VPS26A-205ENST00000489656 B3GNT5Q9BYG0 378 aa14.97□□□□□ -0.01
VPS26A-205ENST00000489656 GPR62Q9BZJ7 368 aa14.97□□□□□ -0.01
VPS26A-205ENST00000489656 MRPL47Q9HD33 250 aaKnown RBP14.97□□□□□ -0.01
VPS26A-205ENST00000489656 OSGEPQ9NPF4 335 aa14.97□□□□□ -0.01
VPS26A-205ENST00000489656 CTTNBP2NLQ9P2B4 639 aa14.97□□□□□ -0.01
VPS26A-205ENST00000489656 WDR35Q9P2L0 1181 aa14.97□□□□□ -0.01
VPS26A-205ENST00000489656 COG5Q9UP83 839 aa14.97□□□□□ -0.01
VPS26A-205ENST00000489656 JRKLQ9Y4A0 524 aa14.97□□□□□ -0.01
VPS26A-205ENST00000489656 MYBPHLA2RUH7 354 aa14.96□□□□□ -0.01
VPS26A-205ENST00000489656 CTAGE9A4FU28 777 aa14.96□□□□□ -0.01
VPS26A-205ENST00000489656 ATMINO43313 823 aaPredicted RBP14.96□□□□□ -0.01
VPS26A-205ENST00000489656 PLA2G4AP47712 749 aa14.96□□□□□ -0.01
VPS26A-205ENST00000489656 NAP1L1P55209 391 aaKnown RBP14.96□□□□□ -0.01
VPS26A-205ENST00000489656 SNX16P57768 344 aa14.96□□□□□ -0.01
VPS26A-205ENST00000489656 TAP1Q03518 808 aa14.96□□□□□ -0.01
VPS26A-205ENST00000489656 PDE4CQ08493 712 aa14.96□□□□□ -0.01
VPS26A-205ENST00000489656 BTG3Q14201 252 aaPredicted RBP14.96□□□□□ -0.01
VPS26A-205ENST00000489656 ZNF268Q14587 947 aaPredicted RBP14.96□□□□□ -0.01
VPS26A-205ENST00000489656 VARS2Q5ST30 1063 aaKnown RBP14.96□□□□□ -0.01
VPS26A-205ENST00000489656 FAM171A1Q5VUB5 890 aa14.96□□□□□ -0.01
VPS26A-205ENST00000489656 C11orf63Q6NUN7 778 aa14.96□□□□□ -0.01
VPS26A-205ENST00000489656 KCNT2Q6UVM3 1135 aa14.96□□□□□ -0.01
VPS26A-205ENST00000489656 TMEM173Q86WV6 379 aaPredicted RBP14.96□□□□□ -0.01
VPS26A-205ENST00000489656 SYCE1Q8N0S2 351 aa14.96□□□□□ -0.01
VPS26A-205ENST00000489656 C3orf20Q8ND61 904 aa14.96□□□□□ -0.01
VPS26A-205ENST00000489656 OR10T2Q8NGX3 314 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms