RNA–Protein interactions for RNA: ENST00000489451.1

ACTN4-206, Transcript of actinin alpha 4, humanhuman

TSL 3

Gene ACTN4, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-206ENST00000489451 SLC30A4O14863 429 aa12.64□□□□□ -0.39
ACTN4-206ENST00000489451 NOL4O94818 638 aa12.64□□□□□ -0.39
ACTN4-206ENST00000489451 PRPF6O94906 941 aaKnown RBP12.64□□□□□ -0.39
ACTN4-206ENST00000489451 ZIC2O95409 532 aaPredicted RBP12.64□□□□□ -0.39
ACTN4-206ENST00000489451 GAP43P17677 238 aa12.64□□□□□ -0.39
ACTN4-206ENST00000489451 GARTP22102 1010 aa12.64□□□□□ -0.39
ACTN4-206ENST00000489451 PLCB2Q00722 1185 aa12.64□□□□□ -0.39
ACTN4-206ENST00000489451 C1QBPQ07021 282 aaKnown RBP12.64□□□□□ -0.39
ACTN4-206ENST00000489451 POSTNQ15063 836 aa12.64□□□□□ -0.39
ACTN4-206ENST00000489451 DDR2Q16832 855 aa12.64□□□□□ -0.39
ACTN4-206ENST00000489451 ITPRIPL2Q3MIP1 535 aa12.64□□□□□ -0.39
ACTN4-206ENST00000489451 TMEM196Q5HYL7 178 aa12.64□□□□□ -0.39
ACTN4-206ENST00000489451 PRR23BQ6ZRT6 265 aa12.64□□□□□ -0.39
ACTN4-206ENST00000489451 SV2BQ7L1I2 683 aa12.64□□□□□ -0.39
ACTN4-206ENST00000489451 LONP2Q86WA8 852 aa12.64□□□□□ -0.39
ACTN4-206ENST00000489451 DCP1BQ8IZD4 617 aaKnown RBP12.64□□□□□ -0.39
ACTN4-206ENST00000489451 LRRC52Q8N7C0 313 aa12.64□□□□□ -0.39
ACTN4-206ENST00000489451 OR5B17Q8NGF7 314 aa12.64□□□□□ -0.39
ACTN4-206ENST00000489451 KBTBD7Q8WVZ9 684 aa12.64□□□□□ -0.39
ACTN4-206ENST00000489451 ACBD6Q9BR61 282 aa12.64□□□□□ -0.39
ACTN4-206ENST00000489451 GDAP2Q9NXN4 497 aa12.64□□□□□ -0.39
ACTN4-206ENST00000489451 DDX43Q9NXZ2 648 aaKnown RBP12.64□□□□□ -0.39
ACTN4-206ENST00000489451 CCDC39Q9UFE4 941 aa12.64□□□□□ -0.39
ACTN4-206ENST00000489451 GMEB2Q9UKD1 530 aa12.64□□□□□ -0.39
ACTN4-206ENST00000489451 GTF3C4Q9UKN8 822 aa12.64□□□□□ -0.39
ACTN4-206ENST00000489451 ANTXRLA6NF34 631 aa12.63□□□□□ -0.39
ACTN4-206ENST00000489451 ATP2C2O75185 946 aa12.63□□□□□ -0.39
ACTN4-206ENST00000489451 PRPF40AO75400 957 aaKnown RBP12.63□□□□□ -0.39
ACTN4-206ENST00000489451 EGFP01133 1207 aa12.63□□□□□ -0.39
ACTN4-206ENST00000489451 RETP07949 1114 aa12.63□□□□□ -0.39
ACTN4-206ENST00000489451 IDEP14735 1019 aa12.63□□□□□ -0.39
ACTN4-206ENST00000489451 PMLP29590 882 aa12.63□□□□□ -0.39
ACTN4-206ENST00000489451 HOXA6P31267 233 aa12.63□□□□□ -0.39
ACTN4-206ENST00000489451 PNPLA4P41247 253 aa12.63□□□□□ -0.39
ACTN4-206ENST00000489451 PXNP49023 591 aaPredicted RBP12.63□□□□□ -0.39
ACTN4-206ENST00000489451 ZXDBP98169 803 aa12.63□□□□□ -0.39
ACTN4-206ENST00000489451 BFSP1Q12934 665 aa12.63□□□□□ -0.39
ACTN4-206ENST00000489451 RUNX3Q13761 415 aa12.63□□□□□ -0.39
ACTN4-206ENST00000489451 SIM2Q14190 667 aaPredicted RBP12.63□□□□□ -0.39
ACTN4-206ENST00000489451 PPP2R5DQ14738 602 aa12.63□□□□□ -0.39
ACTN4-206ENST00000489451 SLC39A14Q15043 492 aa12.63□□□□□ -0.39
ACTN4-206ENST00000489451 ZNF77Q15935 545 aa12.63□□□□□ -0.39
ACTN4-206ENST00000489451 E2F4Q16254 413 aa12.63□□□□□ -0.39
ACTN4-206ENST00000489451 SOWAHAQ2M3V2 549 aa12.63□□□□□ -0.39
ACTN4-206ENST00000489451 WDR5BQ86VZ2 330 aa12.63□□□□□ -0.39
ACTN4-206ENST00000489451 FAM160A2Q8N612 972 aaPredicted RBP12.63□□□□□ -0.39
ACTN4-206ENST00000489451 CSGALNACT2Q8N6G5 542 aa12.63□□□□□ -0.39
ACTN4-206ENST00000489451 MYRFLQ96LU7 910 aa12.63□□□□□ -0.39
ACTN4-206ENST00000489451 GCNAQ96QF7 691 aa12.63□□□□□ -0.39
ACTN4-206ENST00000489451 SEMA4GQ9NTN9 838 aa12.63□□□□□ -0.39
ACTN4-206ENST00000489451 PANK4Q9NVE7 773 aa12.63□□□□□ -0.39
ACTN4-206ENST00000489451 MAGED2Q9UNF1 606 aaPredicted RBP12.63□□□□□ -0.39
ACTN4-206ENST00000489451 EXOC7Q9UPT5 735 aa12.63□□□□□ -0.39
ACTN4-206ENST00000489451 SNX9Q9Y5X1 595 aa12.63□□□□□ -0.39
ACTN4-206ENST00000489451 SPAG17Q6Q759 2223 aa12.63□□□□□ -0.39
ACTN4-206ENST00000489451 ZFYVE26Q68DK2 2539 aa12.63□□□□□ -0.39
ACTN4-206ENST00000489451 TRDMT1O14717 391 aaKnown RBP12.62□□□□□ -0.39
ACTN4-206ENST00000489451 GDF9O60383 454 aa12.62□□□□□ -0.39
ACTN4-206ENST00000489451 CSH1P0DML2 217 aa12.62□□□□□ -0.39
ACTN4-206ENST00000489451 CSH2P0DML3 217 aa12.62□□□□□ -0.39
ACTN4-206ENST00000489451 LMO2P25791 158 aa12.62□□□□□ -0.39
ACTN4-206ENST00000489451 DDX6P26196 483 aaKnown RBP eCLIP12.62□□□□□ -0.39
ACTN4-206ENST00000489451 STAT6P42226 847 aa12.62□□□□□ -0.39
ACTN4-206ENST00000489451 NASPP49321 788 aaPredicted RBP12.62□□□□□ -0.39
ACTN4-206ENST00000489451 SHC2P98077 582 aa12.62□□□□□ -0.39
ACTN4-206ENST00000489451 TSPY1Q01534 308 aa12.62□□□□□ -0.39
ACTN4-206ENST00000489451 USP4Q13107 963 aa12.62□□□□□ -0.39
ACTN4-206ENST00000489451 ZNF268Q14587 947 aaPredicted RBP12.62□□□□□ -0.39
ACTN4-206ENST00000489451 NFE2Q16621 373 aaPredicted RBP12.62□□□□□ -0.39
ACTN4-206ENST00000489451 FAM171BQ6P995 826 aa12.62□□□□□ -0.39
ACTN4-206ENST00000489451 CCDC73Q6ZRK6 1079 aa12.62□□□□□ -0.39
ACTN4-206ENST00000489451 PRR23CQ6ZRP0 262 aa12.62□□□□□ -0.39
ACTN4-206ENST00000489451 MON1AQ86VX9 555 aa12.62□□□□□ -0.39
ACTN4-206ENST00000489451 CBWD2Q8IUF1 395 aa12.62□□□□□ -0.39
ACTN4-206ENST00000489451 ADGRF2Q8IZF7 708 aa12.62□□□□□ -0.39
ACTN4-206ENST00000489451 SYNPOQ8N3V7 929 aa12.62□□□□□ -0.39
ACTN4-206ENST00000489451 TOP6BLQ8N6T0 577 aa12.62□□□□□ -0.39
ACTN4-206ENST00000489451 PDILTQ8N807 584 aa12.62□□□□□ -0.39
ACTN4-206ENST00000489451 TRMT2BQ96GJ1 504 aaKnown RBP12.62□□□□□ -0.39
ACTN4-206ENST00000489451 CYP2S1Q96SQ9 504 aa12.62□□□□□ -0.39
ACTN4-206ENST00000489451 GZF1Q9H116 711 aaPredicted RBP12.62□□□□□ -0.39
ACTN4-206ENST00000489451 ABCB6Q9NP58 842 aa12.62□□□□□ -0.39
ACTN4-206ENST00000489451 CRTAC1Q9NQ79 661 aa12.62□□□□□ -0.39
ACTN4-206ENST00000489451 TDP1Q9NUW8 608 aa12.62□□□□□ -0.39
ACTN4-206ENST00000489451 GCNT4Q9P109 453 aa12.62□□□□□ -0.39
ACTN4-206ENST00000489451 ITGA11Q9UKX5 1188 aa12.62□□□□□ -0.39
ACTN4-206ENST00000489451 SDK1Q7Z5N4 2213 aa12.61□□□□□ -0.39
ACTN4-206ENST00000489451 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.61□□□□□ -0.39
ACTN4-206ENST00000489451 C2orf78A6NCI8 922 aa12.61□□□□□ -0.39
ACTN4-206ENST00000489451 LRP3O75074 770 aa12.61□□□□□ -0.39
ACTN4-206ENST00000489451 CNR2P34972 360 aa12.61□□□□□ -0.39
ACTN4-206ENST00000489451 AVPR1AP37288 418 aa12.61□□□□□ -0.39
ACTN4-206ENST00000489451 USP46P62068 366 aa12.61□□□□□ -0.39
ACTN4-206ENST00000489451 PSMC1P62191 440 aaKnown RBP12.61□□□□□ -0.39
ACTN4-206ENST00000489451 MTF1Q14872 753 aa12.61□□□□□ -0.39
ACTN4-206ENST00000489451 GAB4Q2WGN9 574 aa12.61□□□□□ -0.39
ACTN4-206ENST00000489451 CFAP221Q4G0U5 840 aa12.61□□□□□ -0.39
ACTN4-206ENST00000489451 EPM2AIP1Q7L775 607 aaPredicted RBP12.61□□□□□ -0.39
ACTN4-206ENST00000489451 TMEM86AQ8N2M4 240 aa12.61□□□□□ -0.39
ACTN4-206ENST00000489451 GPD1LQ8N335 351 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms