RNA–Protein interactions for RNA: ENST00000489434.3

SFXN3-207, Transcript of sideroflexin 3, humanhuman

TSL 3

Gene SFXN3, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-207ENST00000489434 MYO1EQ12965 1108 aa12.81□□□□□ -0.36
SFXN3-207ENST00000489434 NR1H3Q13133 447 aa12.81□□□□□ -0.36
SFXN3-207ENST00000489434 L1TD1Q5T7N2 865 aaKnown RBP12.81□□□□□ -0.36
SFXN3-207ENST00000489434 TRIM68Q6AZZ1 485 aa12.81□□□□□ -0.36
SFXN3-207ENST00000489434 CCDC73Q6ZRK6 1079 aa12.81□□□□□ -0.36
SFXN3-207ENST00000489434 TMEM150AQ86TG1 271 aa12.81□□□□□ -0.36
SFXN3-207ENST00000489434 SPATA2LQ8IUW3 424 aaPredicted RBP12.81□□□□□ -0.36
SFXN3-207ENST00000489434 BRSK2Q8IWQ3 736 aa12.81□□□□□ -0.36
SFXN3-207ENST00000489434 CSGALNACT2Q8N6G5 542 aa12.81□□□□□ -0.36
SFXN3-207ENST00000489434 TTC16Q8NEE8 873 aa12.81□□□□□ -0.36
SFXN3-207ENST00000489434 NOC3LQ8WTT2 800 aaKnown RBP12.81□□□□□ -0.36
SFXN3-207ENST00000489434 ATP2A3Q93084 1043 aa12.81□□□□□ -0.36
SFXN3-207ENST00000489434 TRMT2BQ96GJ1 504 aaKnown RBP12.81□□□□□ -0.36
SFXN3-207ENST00000489434 CHAMP1Q96JM3 812 aa12.81□□□□□ -0.36
SFXN3-207ENST00000489434 TMEM206Q9H813 350 aa12.81□□□□□ -0.36
SFXN3-207ENST00000489434 TRPC7Q9HCX4 862 aa12.81□□□□□ -0.36
SFXN3-207ENST00000489434 DUS2Q9NX74 493 aaKnown RBP12.81□□□□□ -0.36
SFXN3-207ENST00000489434 TBC1D7Q9P0N9 293 aa12.81□□□□□ -0.36
SFXN3-207ENST00000489434 PCDHGA5Q9Y5G8 931 aa12.81□□□□□ -0.36
SFXN3-207ENST00000489434 NOL4O94818 638 aa12.8□□□□□ -0.36
SFXN3-207ENST00000489434 EPN2O95208 641 aa12.8□□□□□ -0.36
SFXN3-207ENST00000489434 EGFP01133 1207 aa12.8□□□□□ -0.36
SFXN3-207ENST00000489434 TMEM191BP0C7N4 346 aa12.8□□□□□ -0.36
SFXN3-207ENST00000489434 IDEP14735 1019 aa12.8□□□□□ -0.36
SFXN3-207ENST00000489434 ARSAP15289 507 aa12.8□□□□□ -0.36
SFXN3-207ENST00000489434 GARTP22102 1010 aa12.8□□□□□ -0.36
SFXN3-207ENST00000489434 CYP2F1P24903 491 aa12.8□□□□□ -0.36
SFXN3-207ENST00000489434 RAP1GAPP47736 663 aa12.8□□□□□ -0.36
SFXN3-207ENST00000489434 IFNAR2P48551 515 aa12.8□□□□□ -0.36
SFXN3-207ENST00000489434 MTF1Q14872 753 aa12.8□□□□□ -0.36
SFXN3-207ENST00000489434 ELF2Q15723 593 aa12.8□□□□□ -0.36
SFXN3-207ENST00000489434 DDR2Q16832 855 aa12.8□□□□□ -0.36
SFXN3-207ENST00000489434 CFAP221Q4G0U5 840 aa12.8□□□□□ -0.36
SFXN3-207ENST00000489434 INTS6LQ5JSJ4 861 aaKnown RBP12.8□□□□□ -0.36
SFXN3-207ENST00000489434 C4orf50Q6ZRC1 276 aa12.8□□□□□ -0.36
SFXN3-207ENST00000489434 STXBP4Q6ZWJ1 553 aa12.8□□□□□ -0.36
SFXN3-207ENST00000489434 KBTBD6Q86V97 674 aa12.8□□□□□ -0.36
SFXN3-207ENST00000489434 ADGRF2Q8IZF7 708 aa12.8□□□□□ -0.36
SFXN3-207ENST00000489434 TOP6BLQ8N6T0 577 aa12.8□□□□□ -0.36
SFXN3-207ENST00000489434 C1orf127Q8N9H9 656 aa12.8□□□□□ -0.36
SFXN3-207ENST00000489434 ACDQ96AP0 544 aa12.8□□□□□ -0.36
SFXN3-207ENST00000489434 SAAL1Q96ER3 474 aa12.8□□□□□ -0.36
SFXN3-207ENST00000489434 FUBP3Q96I24 572 aaKnown RBP eCLIP12.8□□□□□ -0.36
SFXN3-207ENST00000489434 MYRFLQ96LU7 910 aa12.8□□□□□ -0.36
SFXN3-207ENST00000489434 STRA6Q9BX79 667 aa12.8□□□□□ -0.36
SFXN3-207ENST00000489434 ECT2Q9H8V3 914 aa12.8□□□□□ -0.36
SFXN3-207ENST00000489434 OLFML3Q9NRN5 406 aa12.8□□□□□ -0.36
SFXN3-207ENST00000489434 TMLHEQ9NVH6 421 aa12.8□□□□□ -0.36
SFXN3-207ENST00000489434 GDAP2Q9NXN4 497 aa12.8□□□□□ -0.36
SFXN3-207ENST00000489434 L1RE1Q9UN81 338 aa12.8□□□□□ -0.36
SFXN3-207ENST00000489434 SNX9Q9Y5X1 595 aa12.8□□□□□ -0.36
SFXN3-207ENST00000489434 LAMA1P25391 3075 aa12.8□□□□□ -0.36
SFXN3-207ENST00000489434 OBSL1O75147 1896 aa12.8□□□□□ -0.36
SFXN3-207ENST00000489434 OTOL1A6NHN0 477 aaPredicted RBP12.79□□□□□ -0.36
SFXN3-207ENST00000489434 MYMKA6NI61 221 aa12.79□□□□□ -0.36
SFXN3-207ENST00000489434 KIAA0391O15091 583 aaKnown RBP12.79□□□□□ -0.36
SFXN3-207ENST00000489434 RHOBTB1O94844 696 aa12.79□□□□□ -0.36
SFXN3-207ENST00000489434 CD2BP2O95400 341 aaKnown RBP12.79□□□□□ -0.36
SFXN3-207ENST00000489434 APBB3O95704 486 aa12.79□□□□□ -0.36
SFXN3-207ENST00000489434 ACAT1P24752 427 aaKnown RBP12.79□□□□□ -0.36
SFXN3-207ENST00000489434 GJA4P35212 333 aa12.79□□□□□ -0.36
SFXN3-207ENST00000489434 STAT6P42226 847 aa12.79□□□□□ -0.36
SFXN3-207ENST00000489434 GPR15P49685 360 aa12.79□□□□□ -0.36
SFXN3-207ENST00000489434 GALK1P51570 392 aa12.79□□□□□ -0.36
SFXN3-207ENST00000489434 KCNA1Q09470 495 aa12.79□□□□□ -0.36
SFXN3-207ENST00000489434 KCNB1Q14721 858 aa12.79□□□□□ -0.36
SFXN3-207ENST00000489434 SF3A2Q15428 464 aaKnown RBP12.79□□□□□ -0.36
SFXN3-207ENST00000489434 MAPRE1Q15691 268 aaKnown RBP12.79□□□□□ -0.36
SFXN3-207ENST00000489434 ST3GAL2Q16842 350 aa12.79□□□□□ -0.36
SFXN3-207ENST00000489434 SDHAF4Q5VUM1 108 aa12.79□□□□□ -0.36
SFXN3-207ENST00000489434 PKN3Q6P5Z2 889 aa12.79□□□□□ -0.36
SFXN3-207ENST00000489434 USP49Q70CQ1 688 aa12.79□□□□□ -0.36
SFXN3-207ENST00000489434 SCN4BQ8IWT1 228 aa12.79□□□□□ -0.36
SFXN3-207ENST00000489434 OSCP1Q8WVF1 389 aa12.79□□□□□ -0.36
SFXN3-207ENST00000489434 CD101Q93033 1021 aa12.79□□□□□ -0.36
SFXN3-207ENST00000489434 ANKRD36BP1Q96IX9 119 aa12.79□□□□□ -0.36
SFXN3-207ENST00000489434 ZC3H10Q96K80 434 aaKnown RBP12.79□□□□□ -0.36
SFXN3-207ENST00000489434 IKZF4Q9H2S9 585 aa12.79□□□□□ -0.36
SFXN3-207ENST00000489434 VPS45Q9NRW7 570 aa12.79□□□□□ -0.36
SFXN3-207ENST00000489434 EHD2Q9NZN4 543 aa12.79□□□□□ -0.36
SFXN3-207ENST00000489434 GTF3C4Q9UKN8 822 aa12.79□□□□□ -0.36
SFXN3-207ENST00000489434 SRPRBQ9Y5M8 271 aaKnown RBP12.79□□□□□ -0.36
SFXN3-207ENST00000489434 USP24Q9UPU5 2620 aa12.78□□□□□ -0.36
SFXN3-207ENST00000489434 CHD6Q8TD26 2715 aa12.78□□□□□ -0.36
SFXN3-207ENST00000489434 TNNC2P02585 160 aa12.78□□□□□ -0.36
SFXN3-207ENST00000489434 MPLP40238 635 aa12.78□□□□□ -0.36
SFXN3-207ENST00000489434 MAGEA11P43364 429 aa12.78□□□□□ -0.36
SFXN3-207ENST00000489434 PSMD2Q13200 908 aa12.78□□□□□ -0.36
SFXN3-207ENST00000489434 SURF1Q15526 300 aa12.78□□□□□ -0.36
SFXN3-207ENST00000489434 CCDC6Q16204 474 aa12.78□□□□□ -0.36
SFXN3-207ENST00000489434 STPG1Q5TH74 334 aa12.78□□□□□ -0.36
SFXN3-207ENST00000489434 SYT13Q7L8C5 426 aa12.78□□□□□ -0.36
SFXN3-207ENST00000489434 DPH6Q7L8W6 267 aa12.78□□□□□ -0.36
SFXN3-207ENST00000489434 C11orf74Q86VG3 221 aa12.78□□□□□ -0.36
SFXN3-207ENST00000489434 STKLD1Q8NE28 680 aa12.78□□□□□ -0.36
SFXN3-207ENST00000489434 RPLP0P6Q8NHW5 317 aa12.78□□□□□ -0.36
SFXN3-207ENST00000489434 DNAJC19Q96DA6 116 aa12.78□□□□□ -0.36
SFXN3-207ENST00000489434 CHFRQ96EP1 664 aa12.78□□□□□ -0.36
SFXN3-207ENST00000489434 HHIPQ96QV1 700 aa12.78□□□□□ -0.36
SFXN3-207ENST00000489434 CYP2S1Q96SQ9 504 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms