RNA–Protein interactions for RNA: ENST00000489241.1

XRN1-213, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-213ENST00000489241 SLC6A2P23975 617 aa5.12□□□□□ -1.59
XRN1-213ENST00000489241 MXRA7P84157 204 aa5.12□□□□□ -1.59
XRN1-213ENST00000489241 CTBP1Q13363 440 aa5.12□□□□□ -1.59
XRN1-213ENST00000489241 LY6G5CQ5SRR4 150 aa5.12□□□□□ -1.59
XRN1-213ENST00000489241 FAM102AQ5T9C2 384 aaPredicted RBP5.12□□□□□ -1.59
XRN1-213ENST00000489241 AGAP9Q5VTM2 703 aa5.12□□□□□ -1.59
XRN1-213ENST00000489241 CCDC70Q6NSX1 233 aa5.12□□□□□ -1.59
XRN1-213ENST00000489241 KCNV1Q6PIU1 500 aa5.12□□□□□ -1.59
XRN1-213ENST00000489241 LVRNQ6Q4G3 990 aa5.12□□□□□ -1.59
XRN1-213ENST00000489241 UNC13DQ70J99 1090 aa5.12□□□□□ -1.59
XRN1-213ENST00000489241 BEND5Q7L4P6 421 aa5.12□□□□□ -1.59
XRN1-213ENST00000489241 PCSK9Q8NBP7 692 aaKnown RBP5.12□□□□□ -1.59
XRN1-213ENST00000489241 PROKR1Q8TCW9 393 aa5.12□□□□□ -1.59
XRN1-213ENST00000489241 GDF15Q99988 308 aa5.12□□□□□ -1.59
XRN1-213ENST00000489241 MLST8Q9BVC4 326 aa5.12□□□□□ -1.59
XRN1-213ENST00000489241 ZNF518BQ9C0D4 1074 aa5.12□□□□□ -1.59
XRN1-213ENST00000489241 RNPEPQ9H4A4 650 aa5.12□□□□□ -1.59
XRN1-213ENST00000489241 GRHPRQ9UBQ7 328 aa5.12□□□□□ -1.59
XRN1-213ENST00000489241 SLC39A10Q9ULF5 831 aa5.12□□□□□ -1.59
XRN1-213ENST00000489241 SLC45A2Q9UMX9 530 aa5.12□□□□□ -1.59
XRN1-213ENST00000489241 MAN2B2Q9Y2E5 1009 aa5.12□□□□□ -1.59
XRN1-213ENST00000489241 GAGE12BA1L429 117 aa5.11□□□□□ -1.59
XRN1-213ENST00000489241 GAGE12HA6NDE8 117 aa5.11□□□□□ -1.59
XRN1-213ENST00000489241 GOLGA6L3A6NEY3 463 aa5.11□□□□□ -1.59
XRN1-213ENST00000489241 TMEM233B4DJY2 109 aa5.11□□□□□ -1.59
XRN1-213ENST00000489241 THAP12O43422 761 aa5.11□□□□□ -1.59
XRN1-213ENST00000489241 SKAP2O75563 359 aaPredicted RBP5.11□□□□□ -1.59
XRN1-213ENST00000489241 DNAJB5O75953 348 aa5.11□□□□□ -1.59
XRN1-213ENST00000489241 RHOBTB3O94955 611 aa5.11□□□□□ -1.59
XRN1-213ENST00000489241 CHEK2O96017 543 aa5.11□□□□□ -1.59
XRN1-213ENST00000489241 HLA-DOAP06340 250 aa5.11□□□□□ -1.59
XRN1-213ENST00000489241 RARBP10826 455 aa5.11□□□□□ -1.59
XRN1-213ENST00000489241 HSD3B1P14060 373 aa5.11□□□□□ -1.59
XRN1-213ENST00000489241 VEGFAP15692 232 aaPredicted RBP5.11□□□□□ -1.59
XRN1-213ENST00000489241 PSMC1P62191 440 aaKnown RBP5.11□□□□□ -1.59
XRN1-213ENST00000489241 PTPAQ15257 358 aa5.11□□□□□ -1.59
XRN1-213ENST00000489241 PFKFB4Q16877 469 aa5.11□□□□□ -1.59
XRN1-213ENST00000489241 ZACNQ401N2 412 aa5.11□□□□□ -1.59
XRN1-213ENST00000489241 METRNLQ641Q3 311 aa5.11□□□□□ -1.59
XRN1-213ENST00000489241 CATSPERGQ6ZRH7 1159 aa5.11□□□□□ -1.59
XRN1-213ENST00000489241 FANCBQ8NB91 859 aa5.11□□□□□ -1.59
XRN1-213ENST00000489241 SLC17A8Q8NDX2 589 aa5.11□□□□□ -1.59
XRN1-213ENST00000489241 OR56A3Q8NH54 315 aa5.11□□□□□ -1.59
XRN1-213ENST00000489241 SCAMP4Q969E2 229 aa5.11□□□□□ -1.59
XRN1-213ENST00000489241 MUL1Q969V5 352 aa5.11□□□□□ -1.59
XRN1-213ENST00000489241 MARS2Q96GW9 593 aaKnown RBP5.11□□□□□ -1.59
XRN1-213ENST00000489241 MED15Q96RN5 788 aa5.11□□□□□ -1.59
XRN1-213ENST00000489241 RMDN3Q96TC7 470 aa5.11□□□□□ -1.59
XRN1-213ENST00000489241 HEPHQ9BQS7 1158 aa5.11□□□□□ -1.59
XRN1-213ENST00000489241 SLC46A2Q9BY10 475 aa5.11□□□□□ -1.59
XRN1-213ENST00000489241 IMPG2Q9BZV3 1241 aa5.11□□□□□ -1.59
XRN1-213ENST00000489241 MAGEH1Q9H213 219 aa5.11□□□□□ -1.59
XRN1-213ENST00000489241 CHST8Q9H2A9 424 aa5.11□□□□□ -1.59
XRN1-213ENST00000489241 OBP2BQ9NPH6 170 aa5.11□□□□□ -1.59
XRN1-213ENST00000489241 ZNF69Q9UC07 566 aa5.11□□□□□ -1.59
XRN1-213ENST00000489241 PGAP2Q9UHJ9 254 aa5.11□□□□□ -1.59
XRN1-213ENST00000489241 HS3ST4Q9Y661 456 aa5.11□□□□□ -1.59
XRN1-213ENST00000489241 A0A087WWL8 130 aa5.1□□□□□ -1.59
XRN1-213ENST00000489241 CLCA1A8K7I4 914 aa5.1□□□□□ -1.59
XRN1-213ENST00000489241 ZNF785A8K8V0 405 aa5.1□□□□□ -1.59
XRN1-213ENST00000489241 LGALS16A8MUM7 142 aa5.1□□□□□ -1.59
XRN1-213ENST00000489241 PYCARD-AS1I3L0S3 204 aa5.1□□□□□ -1.59
XRN1-213ENST00000489241 M0R3H8 397 aa5.1□□□□□ -1.59
XRN1-213ENST00000489241 RNASET2O00584 256 aaKnown RBP5.1□□□□□ -1.59
XRN1-213ENST00000489241 HNRNPDLO14979 420 aaKnown RBP5.1□□□□□ -1.59
XRN1-213ENST00000489241 AREL1O15033 823 aa5.1□□□□□ -1.59
XRN1-213ENST00000489241 UNC5CO95185 931 aa5.1□□□□□ -1.59
XRN1-213ENST00000489241 GPANK1O95872 356 aa5.1□□□□□ -1.59
XRN1-213ENST00000489241 GCP02774 474 aa5.1□□□□□ -1.59
XRN1-213ENST00000489241 SRGNP10124 158 aa5.1□□□□□ -1.59
XRN1-213ENST00000489241 PIGFQ07326 219 aa5.1□□□□□ -1.59
XRN1-213ENST00000489241 ZNF844Q08AG5 666 aa5.1□□□□□ -1.59
XRN1-213ENST00000489241 PPFIA1Q13136 1202 aa5.1□□□□□ -1.59
XRN1-213ENST00000489241 RAB32Q13637 225 aa5.1□□□□□ -1.59
XRN1-213ENST00000489241 SPDYE7PQ495Y7 208 aa5.1□□□□□ -1.59
XRN1-213ENST00000489241 AMOTQ4VCS5 1084 aa5.1□□□□□ -1.59
XRN1-213ENST00000489241 PDCD4Q53EL6 469 aaKnown RBP5.1□□□□□ -1.59
XRN1-213ENST00000489241 SLC44A4Q53GD3 710 aa5.1□□□□□ -1.59
XRN1-213ENST00000489241 NOMO2Q5JPE7 1267 aa5.1□□□□□ -1.59
XRN1-213ENST00000489241 RRAGBQ5VZM2 374 aa5.1□□□□□ -1.59
XRN1-213ENST00000489241 ARMC6Q6NXE6 501 aa5.1□□□□□ -1.59
XRN1-213ENST00000489241 RNF44Q7L0R7 432 aa5.1□□□□□ -1.59
XRN1-213ENST00000489241 DNAJC5GQ8N7S2 189 aa5.1□□□□□ -1.59
XRN1-213ENST00000489241 ATG16L2Q8NAA4 619 aa5.1□□□□□ -1.59
XRN1-213ENST00000489241 OR56A1Q8NGH5 318 aa5.1□□□□□ -1.59
XRN1-213ENST00000489241 CYP2W1Q8TAV3 490 aa5.1□□□□□ -1.59
XRN1-213ENST00000489241 TRAPPC12Q8WVT3 735 aa5.1□□□□□ -1.59
XRN1-213ENST00000489241 GCC1Q96CN9 775 aa5.1□□□□□ -1.59
XRN1-213ENST00000489241 TMEM120AQ9BXJ8 343 aa5.1□□□□□ -1.59
XRN1-213ENST00000489241 GPR35Q9HC97 309 aa5.1□□□□□ -1.59
XRN1-213ENST00000489241 A1CFQ9NQ94 594 aaKnown RBP5.1□□□□□ -1.59
XRN1-213ENST00000489241 RGS17Q9UGC6 210 aaPredicted RBP5.1□□□□□ -1.59
XRN1-213ENST00000489241 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.1□□□□□ -1.59
XRN1-213ENST00000489241 FPGT-TNNI3KV9GXZ4 949 aa5.1□□□□□ -1.59
XRN1-213ENST00000489241 A0A1B0GTW7 788 aa5.09□□□□□ -1.59
XRN1-213ENST00000489241 MBD3L4A6NDZ8 208 aaPredicted RBP5.09□□□□□ -1.59
XRN1-213ENST00000489241 MBD3L3A6NE82 208 aaPredicted RBP5.09□□□□□ -1.59
XRN1-213ENST00000489241 AHRRA9YTQ3 701 aa5.09□□□□□ -1.59
XRN1-213ENST00000489241 NPC1O15118 1278 aa5.09□□□□□ -1.59
XRN1-213ENST00000489241 ZNF185O15231 689 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms