RNA–Protein interactions for RNA: ENST00000488961.5

BEST3-205, Transcript of bestrophin 3, humanhuman

TSL 1 (best) BASIC

Gene BEST3, Length 2,878 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-205ENST00000488961 CCDC142Q17RM4 750 aa8.04□□□□□ -1.12
BEST3-205ENST00000488961 CLEC16AQ2KHT3 1053 aa8.04□□□□□ -1.12
BEST3-205ENST00000488961 DENND2CQ68D51 928 aa8.04□□□□□ -1.12
BEST3-205ENST00000488961 DUPD1Q68J44 220 aa8.04□□□□□ -1.12
BEST3-205ENST00000488961 RUFY4Q6ZNE9 571 aa8.04□□□□□ -1.12
BEST3-205ENST00000488961 TRPM8Q7Z2W7 1104 aa8.04□□□□□ -1.12
BEST3-205ENST00000488961 MCOLN2Q8IZK6 566 aa8.04□□□□□ -1.12
BEST3-205ENST00000488961 ARHGAP18Q8N392 663 aa8.04□□□□□ -1.12
BEST3-205ENST00000488961 SMC1BQ8NDV3 1235 aa8.04□□□□□ -1.12
BEST3-205ENST00000488961 TRAPPC9Q96Q05 1148 aa8.04□□□□□ -1.12
BEST3-205ENST00000488961 ELAC2Q9BQ52 826 aaKnown RBP8.04□□□□□ -1.12
BEST3-205ENST00000488961 VCXQ9H320 206 aa8.04□□□□□ -1.12
BEST3-205ENST00000488961 RNPEPQ9H4A4 650 aa8.04□□□□□ -1.12
BEST3-205ENST00000488961 ALG13Q9NP73 1137 aaKnown RBP8.04□□□□□ -1.12
BEST3-205ENST00000488961 SNCAIPQ9Y6H5 919 aa8.04□□□□□ -1.12
BEST3-205ENST00000488961 TRIM43BA6NCK2 446 aa8.03□□□□□ -1.12
BEST3-205ENST00000488961 POC1B-GALNT4F8VUJ3 575 aa8.03□□□□□ -1.12
BEST3-205ENST00000488961 ABLIM1O14639 778 aa8.03□□□□□ -1.12
BEST3-205ENST00000488961 PHF2O75151 1096 aa8.03□□□□□ -1.12
BEST3-205ENST00000488961 DGAT1O75907 488 aa8.03□□□□□ -1.12
BEST3-205ENST00000488961 GNAZP19086 355 aa8.03□□□□□ -1.12
BEST3-205ENST00000488961 PHKA2P46019 1235 aa8.03□□□□□ -1.12
BEST3-205ENST00000488961 RGS7P49802 495 aa8.03□□□□□ -1.12
BEST3-205ENST00000488961 PPP2R2AP63151 447 aa8.03□□□□□ -1.12
BEST3-205ENST00000488961 OLFML2BQ68BL8 750 aa8.03□□□□□ -1.12
BEST3-205ENST00000488961 ACAD10Q6JQN1 1059 aa8.03□□□□□ -1.12
BEST3-205ENST00000488961 SLC9A9Q8IVB4 645 aa8.03□□□□□ -1.12
BEST3-205ENST00000488961 CD302Q8IX05 232 aa8.03□□□□□ -1.12
BEST3-205ENST00000488961 ANKS4BQ8N8V4 417 aa8.03□□□□□ -1.12
BEST3-205ENST00000488961 RUBCNQ92622 972 aa8.03□□□□□ -1.12
BEST3-205ENST00000488961 CHMP6Q96FZ7 201 aa8.03□□□□□ -1.12
BEST3-205ENST00000488961 PIWIL1Q96J94 861 aaKnown RBP8.03□□□□□ -1.12
BEST3-205ENST00000488961 TMEM121Q9BTD3 319 aa8.03□□□□□ -1.12
BEST3-205ENST00000488961 CENPOQ9BU64 300 aa8.03□□□□□ -1.12
BEST3-205ENST00000488961 CDC42EP4Q9H3Q1 356 aaKnown RBP8.03□□□□□ -1.12
BEST3-205ENST00000488961 PIH1D1Q9NWS0 290 aaKnown RBP8.03□□□□□ -1.12
BEST3-205ENST00000488961 RNF181Q9P0P0 153 aa8.03□□□□□ -1.12
BEST3-205ENST00000488961 EXOC7Q9UPT5 735 aa8.03□□□□□ -1.12
BEST3-205ENST00000488961 IVNS1ABPQ9Y6Y0 642 aa8.03□□□□□ -1.12
BEST3-205ENST00000488961 MYPNQ86TC9 1320 aa8.03□□□□□ -1.12
BEST3-205ENST00000488961 PHIPQ8WWQ0 1821 aa8.03□□□□□ -1.12
BEST3-205ENST00000488961 MYO15AQ9UKN7 3530 aa8.03□□□□□ -1.12
BEST3-205ENST00000488961 LCTP09848 1927 aa8.03□□□□□ -1.12
BEST3-205ENST00000488961 RLFQ13129 1914 aa8.03□□□□□ -1.12
BEST3-205ENST00000488961 WDR91A4D1P6 747 aa8.03□□□□□ -1.12
BEST3-205ENST00000488961 H0Y3Z8 333 aa8.03□□□□□ -1.12
BEST3-205ENST00000488961 GOLGA8RI6L899 631 aa8.03□□□□□ -1.12
BEST3-205ENST00000488961 SIX1Q15475 284 aaPredicted RBP8.03□□□□□ -1.12
BEST3-205ENST00000488961 CNPY1Q3B7I2 92 aa8.03□□□□□ -1.12
BEST3-205ENST00000488961 WDR72Q3MJ13 1102 aa8.03□□□□□ -1.12
BEST3-205ENST00000488961 PRAMEF19Q5SWL8 479 aa8.03□□□□□ -1.12
BEST3-205ENST00000488961 DCAF15Q66K64 600 aa8.03□□□□□ -1.12
BEST3-205ENST00000488961 APLFQ8IW19 511 aaPredicted RBP8.03□□□□□ -1.12
BEST3-205ENST00000488961 RHOT2Q8IXI1 618 aa8.03□□□□□ -1.12
BEST3-205ENST00000488961 C12orf29Q8N999 325 aa8.03□□□□□ -1.12
BEST3-205ENST00000488961 FBF1Q8TES7 1133 aa8.03□□□□□ -1.12
BEST3-205ENST00000488961 XPO6Q96QU8 1125 aaKnown RBP8.03□□□□□ -1.12
BEST3-205ENST00000488961 SRPK1Q96SB4 655 aaKnown RBP8.03□□□□□ -1.12
BEST3-205ENST00000488961 TRIM56Q9BRZ2 755 aaKnown RBP8.03□□□□□ -1.12
BEST3-205ENST00000488961 FAM49AQ9H0Q0 323 aaPredicted RBP8.03□□□□□ -1.12
BEST3-205ENST00000488961 GPATCH2LQ9NWQ4 482 aa8.03□□□□□ -1.12
BEST3-205ENST00000488961 GPRC5DQ9NZD1 345 aa8.03□□□□□ -1.12
BEST3-205ENST00000488961 SSC5DA1L4H1 1573 aa8.02□□□□□ -1.12
BEST3-205ENST00000488961 SYNJ2BP-COX16A0A087WUM0 186 aa8.02□□□□□ -1.13
BEST3-205ENST00000488961 CARNS1A5YM72 827 aa8.02□□□□□ -1.13
BEST3-205ENST00000488961 RGS16O15492 202 aaPredicted RBP8.02□□□□□ -1.13
BEST3-205ENST00000488961 FARP2O94887 1054 aaPredicted RBP8.02□□□□□ -1.13
BEST3-205ENST00000488961 C4BPAP04003 597 aaKnown RBP8.02□□□□□ -1.13
BEST3-205ENST00000488961 HOXA7P31268 230 aaPredicted RBP8.02□□□□□ -1.13
BEST3-205ENST00000488961 HOXD11P31277 338 aaPredicted RBP8.02□□□□□ -1.13
BEST3-205ENST00000488961 ERFP50548 548 aa8.02□□□□□ -1.13
BEST3-205ENST00000488961 CACNA2D1P54289 1103 aa8.02□□□□□ -1.13
BEST3-205ENST00000488961 OXCT1P55809 520 aa8.02□□□□□ -1.13
BEST3-205ENST00000488961 ZNF280AP59817 542 aaPredicted RBP8.02□□□□□ -1.13
BEST3-205ENST00000488961 CUL2Q13617 745 aa8.02□□□□□ -1.13
BEST3-205ENST00000488961 EFTUD2Q15029 972 aaKnown RBP eCLIP8.02□□□□□ -1.13
BEST3-205ENST00000488961 SMUG1Q53HV7 270 aa8.02□□□□□ -1.13
BEST3-205ENST00000488961 FAXCQ5TGI0 409 aa8.02□□□□□ -1.13
BEST3-205ENST00000488961 RASIP1Q5U651 963 aa8.02□□□□□ -1.13
BEST3-205ENST00000488961 GPAT2Q6NUI2 795 aa8.02□□□□□ -1.13
BEST3-205ENST00000488961 DCUN1D2Q6PH85 259 aa8.02□□□□□ -1.13
BEST3-205ENST00000488961 MFSD7Q6UXD7 560 aa8.02□□□□□ -1.13
BEST3-205ENST00000488961 SESTD1Q86VW0 696 aa8.02□□□□□ -1.13
BEST3-205ENST00000488961 SDR16C5Q8N3Y7 309 aa8.02□□□□□ -1.13
BEST3-205ENST00000488961 JOSD2Q8TAC2 188 aa8.02□□□□□ -1.13
BEST3-205ENST00000488961 PSPC1Q8WXF1 523 aaKnown RBP8.02□□□□□ -1.13
BEST3-205ENST00000488961 SPOCK2Q92563 424 aa8.02□□□□□ -1.13
BEST3-205ENST00000488961 HSPH1Q92598 858 aa8.02□□□□□ -1.13
BEST3-205ENST00000488961 MFSD14AQ96MC6 490 aa8.02□□□□□ -1.13
BEST3-205ENST00000488961 SPATA33Q96N06 139 aa8.02□□□□□ -1.13
BEST3-205ENST00000488961 GBP5Q96PP8 586 aa8.02□□□□□ -1.13
BEST3-205ENST00000488961 TWNKQ96RR1 684 aa8.02□□□□□ -1.13
BEST3-205ENST00000488961 KCND2Q9NZV8 630 aa8.02□□□□□ -1.13
BEST3-205ENST00000488961 COX16Q9P0S2 106 aa8.02□□□□□ -1.13
BEST3-205ENST00000488961 CYTH4Q9UIA0 394 aa8.02□□□□□ -1.13
BEST3-205ENST00000488961 SCOCQ9UIL1 159 aa8.02□□□□□ -1.13
BEST3-205ENST00000488961 ZNF180Q9UJW8 692 aa8.02□□□□□ -1.13
BEST3-205ENST00000488961 PNMA3Q9UL41 463 aa8.02□□□□□ -1.13
BEST3-205ENST00000488961 DNPEPQ9ULA0 475 aa8.02□□□□□ -1.13
BEST3-205ENST00000488961 GMEB1Q9Y692 573 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms