RNA–Protein interactions for RNA: ENST00000488935.5

ERGIC3-217, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 389 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-217ENST00000488935 GREB1Q4ZG55 1949 aa17.07■□□□□ 0.32
ERGIC3-217ENST00000488935 FRMD3A2A2Y4 597 aa17.06■□□□□ 0.32
ERGIC3-217ENST00000488935 C2orf78A6NCI8 922 aa17.06■□□□□ 0.32
ERGIC3-217ENST00000488935 SCAMP3O14828 347 aaKnown RBP17.06■□□□□ 0.32
ERGIC3-217ENST00000488935 AXIN1O15169 862 aa17.06■□□□□ 0.32
ERGIC3-217ENST00000488935 KCNA4P22459 653 aa17.06■□□□□ 0.32
ERGIC3-217ENST00000488935 PNPLA4P41247 253 aa17.06■□□□□ 0.32
ERGIC3-217ENST00000488935 GALK1P51570 392 aa17.06■□□□□ 0.32
ERGIC3-217ENST00000488935 RBP5P82980 135 aa17.06■□□□□ 0.32
ERGIC3-217ENST00000488935 STK38Q15208 465 aa17.06■□□□□ 0.32
ERGIC3-217ENST00000488935 LAIR1Q6GTX8 287 aa17.06■□□□□ 0.32
ERGIC3-217ENST00000488935 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.06■□□□□ 0.32
ERGIC3-217ENST00000488935 MON1AQ86VX9 555 aa17.06■□□□□ 0.32
ERGIC3-217ENST00000488935 LONP2Q86WA8 852 aa17.06■□□□□ 0.32
ERGIC3-217ENST00000488935 NT5DC4Q86YG4 428 aa17.06■□□□□ 0.32
ERGIC3-217ENST00000488935 SPATA2LQ8IUW3 424 aaPredicted RBP17.06■□□□□ 0.32
ERGIC3-217ENST00000488935 GPD1LQ8N335 351 aa17.06■□□□□ 0.32
ERGIC3-217ENST00000488935 FAM160A2Q8N612 972 aaPredicted RBP17.06■□□□□ 0.32
ERGIC3-217ENST00000488935 ARL14EPQ8N8R7 260 aaPredicted RBP17.06■□□□□ 0.32
ERGIC3-217ENST00000488935 MRPS31Q92665 395 aaKnown RBP17.06■□□□□ 0.32
ERGIC3-217ENST00000488935 ELMO3Q96BJ8 720 aa17.06■□□□□ 0.32
ERGIC3-217ENST00000488935 ACBD6Q9BR61 282 aa17.06■□□□□ 0.32
ERGIC3-217ENST00000488935 IER2Q9BTL4 223 aa17.06■□□□□ 0.32
ERGIC3-217ENST00000488935 SMOC1Q9H4F8 434 aa17.06■□□□□ 0.32
ERGIC3-217ENST00000488935 OLFML3Q9NRN5 406 aa17.06■□□□□ 0.32
ERGIC3-217ENST00000488935 WNT6Q9Y6F9 365 aa17.06■□□□□ 0.32
ERGIC3-217ENST00000488935 SPAG17Q6Q759 2223 aa17.06■□□□□ 0.32
ERGIC3-217ENST00000488935 MYOFQ9NZM1 2061 aa17.05■□□□□ 0.32
ERGIC3-217ENST00000488935 CLIC2O15247 247 aa17.05■□□□□ 0.32
ERGIC3-217ENST00000488935 RNF40O75150 1001 aa17.05■□□□□ 0.32
ERGIC3-217ENST00000488935 LDHAP00338 332 aaKnown RBP17.05■□□□□ 0.32
ERGIC3-217ENST00000488935 RETP07949 1114 aa17.05■□□□□ 0.32
ERGIC3-217ENST00000488935 CSH1P0DML2 217 aa17.05■□□□□ 0.32
ERGIC3-217ENST00000488935 CSH2P0DML3 217 aa17.05■□□□□ 0.32
ERGIC3-217ENST00000488935 WEE1P30291 646 aa17.05■□□□□ 0.32
ERGIC3-217ENST00000488935 PLCB2Q00722 1185 aa17.05■□□□□ 0.32
ERGIC3-217ENST00000488935 MYL7Q01449 175 aa17.05■□□□□ 0.32
ERGIC3-217ENST00000488935 SMARCB1Q12824 385 aa17.05■□□□□ 0.32
ERGIC3-217ENST00000488935 NFE2Q16621 373 aaPredicted RBP17.05■□□□□ 0.32
ERGIC3-217ENST00000488935 TMEM196Q5HYL7 178 aa17.05■□□□□ 0.32
ERGIC3-217ENST00000488935 KBTBD7Q8WVZ9 684 aa17.05■□□□□ 0.32
ERGIC3-217ENST00000488935 DHX58Q96C10 678 aa17.05■□□□□ 0.32
ERGIC3-217ENST00000488935 MSANTD3Q96H12 275 aa17.05■□□□□ 0.32
ERGIC3-217ENST00000488935 HPDLQ96IR7 371 aa17.05■□□□□ 0.32
ERGIC3-217ENST00000488935 LINC00597Q9H2U6 94 aa17.05■□□□□ 0.32
ERGIC3-217ENST00000488935 CRTAC1Q9NQ79 661 aa17.05■□□□□ 0.32
ERGIC3-217ENST00000488935 SEMA4GQ9NTN9 838 aa17.05■□□□□ 0.32
ERGIC3-217ENST00000488935 INTS13Q9NVM9 706 aa17.05■□□□□ 0.32
ERGIC3-217ENST00000488935 ITGA11Q9UKX5 1188 aa17.05■□□□□ 0.32
ERGIC3-217ENST00000488935 NME7Q9Y5B8 376 aa17.05■□□□□ 0.32
ERGIC3-217ENST00000488935 MYO16Q9Y6X6 1858 aa17.04■□□□□ 0.32
ERGIC3-217ENST00000488935 STX6O43752 255 aa17.04■□□□□ 0.32
ERGIC3-217ENST00000488935 BDNFP23560 247 aa17.04■□□□□ 0.32
ERGIC3-217ENST00000488935 USP46P62068 366 aa17.04■□□□□ 0.32
ERGIC3-217ENST00000488935 POU5F1Q01860 360 aaKnown RBP17.04■□□□□ 0.32
ERGIC3-217ENST00000488935 LMNB2Q03252 620 aa17.04■□□□□ 0.32
ERGIC3-217ENST00000488935 SF3A2Q15428 464 aaKnown RBP17.04■□□□□ 0.32
ERGIC3-217ENST00000488935 CC2D1AQ6P1N0 951 aaPredicted RBP17.04■□□□□ 0.32
ERGIC3-217ENST00000488935 NELFCDQ8IXH7 590 aa17.04■□□□□ 0.32
ERGIC3-217ENST00000488935 CCDC65Q8IXS2 484 aa17.04■□□□□ 0.32
ERGIC3-217ENST00000488935 GPR161Q8N6U8 529 aaKnown RBP17.04■□□□□ 0.32
ERGIC3-217ENST00000488935 LRRC52Q8N7C0 313 aa17.04■□□□□ 0.32
ERGIC3-217ENST00000488935 EZH1Q92800 747 aaPredicted RBP17.04■□□□□ 0.32
ERGIC3-217ENST00000488935 MYLPFQ96A32 169 aa17.04■□□□□ 0.32
ERGIC3-217ENST00000488935 ANKRD36BP1Q96IX9 119 aa17.04■□□□□ 0.32
ERGIC3-217ENST00000488935 CNTNAP3BQ96NU0 1288 aa17.04■□□□□ 0.32
ERGIC3-217ENST00000488935 HHIPQ96QV1 700 aa17.04■□□□□ 0.32
ERGIC3-217ENST00000488935 SYT15Q9BQS2 421 aa17.04■□□□□ 0.32
ERGIC3-217ENST00000488935 CNTNAP3Q9BZ76 1288 aa17.04■□□□□ 0.32
ERGIC3-217ENST00000488935 ARRDC1-AS1Q9H2J1 176 aa17.04■□□□□ 0.32
ERGIC3-217ENST00000488935 GDAP2Q9NXN4 497 aa17.04■□□□□ 0.32
ERGIC3-217ENST00000488935 HSPBP1Q9NZL4 362 aa17.04■□□□□ 0.32
ERGIC3-217ENST00000488935 GABRDO14764 452 aa17.03■□□□□ 0.32
ERGIC3-217ENST00000488935 NOL4O94818 638 aa17.03■□□□□ 0.32
ERGIC3-217ENST00000488935 CST3P01034 146 aaPredicted RBP17.03■□□□□ 0.32
ERGIC3-217ENST00000488935 CKMP06732 381 aa17.03■□□□□ 0.32
ERGIC3-217ENST00000488935 GJA4P35212 333 aa17.03■□□□□ 0.32
ERGIC3-217ENST00000488935 CYP2J2P51589 502 aa17.03■□□□□ 0.32
ERGIC3-217ENST00000488935 RPL10AP62906 217 aaKnown RBP17.03■□□□□ 0.32
ERGIC3-217ENST00000488935 ASIC1P78348 528 aa17.03■□□□□ 0.32
ERGIC3-217ENST00000488935 ZXDBP98169 803 aa17.03■□□□□ 0.32
ERGIC3-217ENST00000488935 GRSF1Q12849 480 aaKnown RBP eCLIP17.03■□□□□ 0.32
ERGIC3-217ENST00000488935 PSMD2Q13200 908 aa17.03■□□□□ 0.32
ERGIC3-217ENST00000488935 E2F4Q16254 413 aa17.03■□□□□ 0.32
ERGIC3-217ENST00000488935 PRR23CQ6ZRP0 262 aa17.03■□□□□ 0.32
ERGIC3-217ENST00000488935 KBTBD6Q86V97 674 aa17.03■□□□□ 0.32
ERGIC3-217ENST00000488935 TMEM86AQ8N2M4 240 aa17.03■□□□□ 0.32
ERGIC3-217ENST00000488935 TOP6BLQ8N6T0 577 aa17.03■□□□□ 0.32
ERGIC3-217ENST00000488935 LINC00301Q8NCQ3 95 aa17.03■□□□□ 0.32
ERGIC3-217ENST00000488935 MMS19Q96T76 1030 aa17.03■□□□□ 0.32
ERGIC3-217ENST00000488935 MRPL45Q9BRJ2 306 aaKnown RBP17.03■□□□□ 0.32
ERGIC3-217ENST00000488935 BLZF1Q9H2G9 400 aa17.03■□□□□ 0.32
ERGIC3-217ENST00000488935 RXFP3Q9NSD7 469 aa17.03■□□□□ 0.32
ERGIC3-217ENST00000488935 DUS2Q9NX74 493 aaKnown RBP17.03■□□□□ 0.32
ERGIC3-217ENST00000488935 INVSQ9Y283 1065 aa17.03■□□□□ 0.32
ERGIC3-217ENST00000488935 PTPRDP23468 1912 aa17.02■□□□□ 0.32
ERGIC3-217ENST00000488935 ZNF233A6NK53 670 aa17.02■□□□□ 0.32
ERGIC3-217ENST00000488935 PRR5-ARHGAP8B1AHC4 643 aa17.02■□□□□ 0.32
ERGIC3-217ENST00000488935 TRDMT1O14717 391 aaKnown RBP17.02■□□□□ 0.32
ERGIC3-217ENST00000488935 DCLK1O15075 740 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms