RNA–Protein interactions for RNA: ENST00000488896.1

PTPN4-212, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 575 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-212ENST00000488896 MOGAT1Q96PD6 335 aa6□□□□□ -1.45
PTPN4-212ENST00000488896 SERTAD4Q9NUC0 356 aa6□□□□□ -1.45
PTPN4-212ENST00000488896 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6□□□□□ -1.45
PTPN4-212ENST00000488896 NDRG4Q9ULP0 352 aaKnown RBP6□□□□□ -1.45
PTPN4-212ENST00000488896 SSX2IPQ9Y2D8 614 aa6□□□□□ -1.45
PTPN4-212ENST00000488896 PCSK5Q92824 1860 aa5.99□□□□□ -1.45
PTPN4-212ENST00000488896 SLC16A3O15427 465 aaKnown RBP5.99□□□□□ -1.45
PTPN4-212ENST00000488896 RFPL1O75677 317 aa5.99□□□□□ -1.45
PTPN4-212ENST00000488896 S100BP04271 92 aaPredicted RBP5.99□□□□□ -1.45
PTPN4-212ENST00000488896 FESP07332 822 aa5.99□□□□□ -1.45
PTPN4-212ENST00000488896 NPR1P16066 1061 aa5.99□□□□□ -1.45
PTPN4-212ENST00000488896 PCSK6P29122 969 aa5.99□□□□□ -1.45
PTPN4-212ENST00000488896 KRT17Q04695 432 aa5.99□□□□□ -1.45
PTPN4-212ENST00000488896 TEDDM1Q5T9Z0 273 aa5.99□□□□□ -1.45
PTPN4-212ENST00000488896 NPNTQ6UXI9 565 aa5.99□□□□□ -1.45
PTPN4-212ENST00000488896 ZNF280BQ86YH2 543 aa5.99□□□□□ -1.45
PTPN4-212ENST00000488896 DNAJC5GQ8N7S2 189 aa5.99□□□□□ -1.45
PTPN4-212ENST00000488896 ATG4AQ8WYN0 398 aa5.99□□□□□ -1.45
PTPN4-212ENST00000488896 DDB2Q92466 427 aa5.99□□□□□ -1.45
PTPN4-212ENST00000488896 B3GNT5Q9BYG0 378 aa5.99□□□□□ -1.45
PTPN4-212ENST00000488896 CCNL1Q9UK58 526 aaPredicted RBP5.99□□□□□ -1.45
PTPN4-212ENST00000488896 SHOC2Q9UQ13 582 aa5.99□□□□□ -1.45
PTPN4-212ENST00000488896 MED16Q9Y2X0 877 aa5.99□□□□□ -1.45
PTPN4-212ENST00000488896 QSOX1O00391 747 aa5.98□□□□□ -1.45
PTPN4-212ENST00000488896 PRPF3O43395 683 aaKnown RBP5.98□□□□□ -1.45
PTPN4-212ENST00000488896 TLR5O60602 858 aa5.98□□□□□ -1.45
PTPN4-212ENST00000488896 FAM163BP0C2L3 166 aa5.98□□□□□ -1.45
PTPN4-212ENST00000488896 ENGP17813 658 aa5.98□□□□□ -1.45
PTPN4-212ENST00000488896 CYP2C18P33260 490 aa5.98□□□□□ -1.45
PTPN4-212ENST00000488896 VIPR2P41587 438 aa5.98□□□□□ -1.45
PTPN4-212ENST00000488896 SOX10P56693 466 aa5.98□□□□□ -1.45
PTPN4-212ENST00000488896 SATB1Q01826 763 aa5.98□□□□□ -1.45
PTPN4-212ENST00000488896 SRSF4Q08170 494 aaKnown RBP5.98□□□□□ -1.45
PTPN4-212ENST00000488896 E2F2Q14209 437 aa5.98□□□□□ -1.45
PTPN4-212ENST00000488896 DEPDC1Q5TB30 811 aa5.98□□□□□ -1.45
PTPN4-212ENST00000488896 FCRLBQ6BAA4 426 aa5.98□□□□□ -1.45
PTPN4-212ENST00000488896 ZNF783Q6ZMS7 281 aa5.98□□□□□ -1.45
PTPN4-212ENST00000488896 OVCH2Q7RTZ1 564 aa5.98□□□□□ -1.45
PTPN4-212ENST00000488896 DTX2Q86UW9 622 aa5.98□□□□□ -1.45
PTPN4-212ENST00000488896 CHPFQ8IZ52 775 aa5.98□□□□□ -1.45
PTPN4-212ENST00000488896 LRRC71Q8N4P6 559 aa5.98□□□□□ -1.45
PTPN4-212ENST00000488896 XAGE5Q8WWM1 108 aa5.98□□□□□ -1.45
PTPN4-212ENST00000488896 RAPGEF4Q8WZA2 1011 aa5.98□□□□□ -1.45
PTPN4-212ENST00000488896 GLG1Q92896 1179 aa5.98□□□□□ -1.45
PTPN4-212ENST00000488896 R3HDM4Q96D70 268 aa5.98□□□□□ -1.45
PTPN4-212ENST00000488896 PUS7Q96PZ0 661 aaKnown RBP5.98□□□□□ -1.45
PTPN4-212ENST00000488896 CAMKK2Q96RR4 588 aa5.98□□□□□ -1.45
PTPN4-212ENST00000488896 GLOD4Q9HC38 313 aa5.98□□□□□ -1.45
PTPN4-212ENST00000488896 SH3BP4Q9P0V3 963 aa5.98□□□□□ -1.45
PTPN4-212ENST00000488896 BTN3A1O00481 513 aa5.97□□□□□ -1.45
PTPN4-212ENST00000488896 SCGB1D2O95969 90 aa5.97□□□□□ -1.45
PTPN4-212ENST00000488896 THP07101 528 aa5.97□□□□□ -1.45
PTPN4-212ENST00000488896 IL6RP08887 468 aaPredicted RBP5.97□□□□□ -1.45
PTPN4-212ENST00000488896 LMO1P25800 156 aa5.97□□□□□ -1.45
PTPN4-212ENST00000488896 PPIFP30405 207 aaKnown RBP5.97□□□□□ -1.45
PTPN4-212ENST00000488896 ABCG1P45844 678 aa5.97□□□□□ -1.45
PTPN4-212ENST00000488896 CTBP1Q13363 440 aa5.97□□□□□ -1.45
PTPN4-212ENST00000488896 LLGL1Q15334 1064 aa5.97□□□□□ -1.45
PTPN4-212ENST00000488896 ANO6Q4KMQ2 910 aa5.97□□□□□ -1.45
PTPN4-212ENST00000488896 LMBRD2Q68DH5 695 aaPredicted RBP5.97□□□□□ -1.45
PTPN4-212ENST00000488896 OR6B3Q8NGW1 331 aa5.97□□□□□ -1.45
PTPN4-212ENST00000488896 JDP2Q8WYK2 163 aa5.97□□□□□ -1.45
PTPN4-212ENST00000488896 TRIM54Q9BYV2 358 aa5.97□□□□□ -1.45
PTPN4-212ENST00000488896 TNFRSF18Q9Y5U5 241 aa5.97□□□□□ -1.45
PTPN4-212ENST00000488896 TMEM233B4DJY2 109 aa5.96□□□□□ -1.46
PTPN4-212ENST00000488896 H0YIZ8 118 aa5.96□□□□□ -1.46
PTPN4-212ENST00000488896 SMIM22K7EJ46 135 aa5.96□□□□□ -1.46
PTPN4-212ENST00000488896 TBC1D4O60343 1298 aa5.96□□□□□ -1.46
PTPN4-212ENST00000488896 TUSC2O75896 110 aa5.96□□□□□ -1.46
PTPN4-212ENST00000488896 ADORA2AP29274 412 aa5.96□□□□□ -1.46
PTPN4-212ENST00000488896 SLC7A1P30825 629 aa5.96□□□□□ -1.46
PTPN4-212ENST00000488896 EEFSECP57772 596 aaKnown RBP5.96□□□□□ -1.46
PTPN4-212ENST00000488896 MYO1EQ12965 1108 aa5.96□□□□□ -1.46
PTPN4-212ENST00000488896 PPP2R5AQ15172 486 aa5.96□□□□□ -1.46
PTPN4-212ENST00000488896 PCID2Q5JVF3 399 aa5.96□□□□□ -1.46
PTPN4-212ENST00000488896 SLC29A4Q7RTT9 530 aa5.96□□□□□ -1.46
PTPN4-212ENST00000488896 SLC15A3Q8IY34 581 aa5.96□□□□□ -1.46
PTPN4-212ENST00000488896 FANCBQ8NB91 859 aa5.96□□□□□ -1.46
PTPN4-212ENST00000488896 HASPINQ8TF76 798 aa5.96□□□□□ -1.46
PTPN4-212ENST00000488896 DPF1Q92782 380 aa5.96□□□□□ -1.46
PTPN4-212ENST00000488896 MS4A7Q9GZW8 240 aaPredicted RBP5.96□□□□□ -1.46
PTPN4-212ENST00000488896 CXorf36Q9H7Y0 433 aa5.96□□□□□ -1.46
PTPN4-212ENST00000488896 DLL3Q9NYJ7 618 aa5.96□□□□□ -1.46
PTPN4-212ENST00000488896 G3BP2Q9UN86 482 aaKnown RBP5.96□□□□□ -1.46
PTPN4-212ENST00000488896 TBC1D30Q9Y2I9 924 aa5.96□□□□□ -1.46
PTPN4-212ENST00000488896 EID1Q9Y6B2 187 aa5.96□□□□□ -1.46
PTPN4-212ENST00000488896 AOX1Q06278 1338 aa5.96□□□□□ -1.46
PTPN4-212ENST00000488896 A1L4Q6 167 aa5.95□□□□□ -1.46
PTPN4-212ENST00000488896 TARM1B6A8C7 271 aa5.95□□□□□ -1.46
PTPN4-212ENST00000488896 PHGDHO43175 533 aaKnown RBP5.95□□□□□ -1.46
PTPN4-212ENST00000488896 LRPAP1P30533 357 aa5.95□□□□□ -1.46
PTPN4-212ENST00000488896 PRKAG1P54619 331 aa5.95□□□□□ -1.46
PTPN4-212ENST00000488896 GPSM2P81274 684 aa5.95□□□□□ -1.46
PTPN4-212ENST00000488896 SLC13A2Q13183 592 aa5.95□□□□□ -1.46
PTPN4-212ENST00000488896 ZIK1Q3SY52 487 aaPredicted RBP5.95□□□□□ -1.46
PTPN4-212ENST00000488896 ARHGAP29Q52LW3 1261 aa5.95□□□□□ -1.46
PTPN4-212ENST00000488896 SUMO4Q6EEV6 95 aa5.95□□□□□ -1.46
PTPN4-212ENST00000488896 CEP85Q6P2H3 762 aa5.95□□□□□ -1.46
PTPN4-212ENST00000488896 NAPRTQ6XQN6 538 aa5.95□□□□□ -1.46
PTPN4-212ENST00000488896 KBTBD7Q8WVZ9 684 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms