RNA–Protein interactions for RNA: ENST00000488767.1

PHF1-210, Transcript of PHD finger protein 1, humanhuman

TSL 3

Gene PHF1, Length 849 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-210ENST00000488767 PRKCSHP14314 528 aaPredicted RBP13.73□□□□□ -0.21
PHF1-210ENST00000488767 CEBPBP17676 345 aa13.73□□□□□ -0.21
PHF1-210ENST00000488767 ERCC5P28715 1186 aaPredicted RBP13.73□□□□□ -0.21
PHF1-210ENST00000488767 ASPAP45381 313 aa13.73□□□□□ -0.21
PHF1-210ENST00000488767 CDH8P55286 799 aa13.73□□□□□ -0.21
PHF1-210ENST00000488767 MARSP56192 900 aaKnown RBP13.73□□□□□ -0.21
PHF1-210ENST00000488767 NLRP12P59046 1061 aa13.73□□□□□ -0.21
PHF1-210ENST00000488767 SIGLEC14Q08ET2 396 aa13.73□□□□□ -0.21
PHF1-210ENST00000488767 SLC5A9Q2M3M2 681 aa13.73□□□□□ -0.21
PHF1-210ENST00000488767 SPOPLQ6IQ16 392 aa13.73□□□□□ -0.21
PHF1-210ENST00000488767 HS6ST3Q8IZP7 471 aa13.73□□□□□ -0.21
PHF1-210ENST00000488767 GIPC2Q8TF65 315 aa13.73□□□□□ -0.21
PHF1-210ENST00000488767 KHSRPQ92945 711 aaKnown RBP eCLIP13.73□□□□□ -0.21
PHF1-210ENST00000488767 MCRS1Q96EZ8 462 aa13.73□□□□□ -0.21
PHF1-210ENST00000488767 PCED1BQ96HM7 432 aa13.73□□□□□ -0.21
PHF1-210ENST00000488767 PKMYT1Q99640 499 aa13.73□□□□□ -0.21
PHF1-210ENST00000488767 LPIN3Q9BQK8 851 aa13.73□□□□□ -0.21
PHF1-210ENST00000488767 DNAJC25Q9H1X3 360 aa13.73□□□□□ -0.21
PHF1-210ENST00000488767 ATXN3LQ9H3M9 355 aa13.73□□□□□ -0.21
PHF1-210ENST00000488767 EPHX3Q9H6B9 360 aa13.73□□□□□ -0.21
PHF1-210ENST00000488767 ZMYM5Q9UJ78 669 aa13.73□□□□□ -0.21
PHF1-210ENST00000488767 FBXL21Q9UKT6 434 aa13.73□□□□□ -0.21
PHF1-210ENST00000488767 MAGED2Q9UNF1 606 aaPredicted RBP13.73□□□□□ -0.21
PHF1-210ENST00000488767 A0A1W2PRU2 124 aa13.72□□□□□ -0.21
PHF1-210ENST00000488767 ANHXE9PGG2 379 aa13.72□□□□□ -0.21
PHF1-210ENST00000488767 HCRTO43612 131 aa13.72□□□□□ -0.21
PHF1-210ENST00000488767 ATF6P18850 670 aa13.72□□□□□ -0.21
PHF1-210ENST00000488767 CD58P19256 250 aa13.72□□□□□ -0.21
PHF1-210ENST00000488767 PTMSP20962 102 aa13.72□□□□□ -0.21
PHF1-210ENST00000488767 BDNFP23560 247 aa13.72□□□□□ -0.21
PHF1-210ENST00000488767 TBXAS1P24557 533 aaPredicted RBP13.72□□□□□ -0.21
PHF1-210ENST00000488767 GABRR2P28476 465 aa13.72□□□□□ -0.21
PHF1-210ENST00000488767 FMO5P49326 533 aa13.72□□□□□ -0.21
PHF1-210ENST00000488767 NDST1P52848 882 aa13.72□□□□□ -0.21
PHF1-210ENST00000488767 HTR4Q13639 388 aa13.72□□□□□ -0.21
PHF1-210ENST00000488767 DDR2Q16832 855 aa13.72□□□□□ -0.21
PHF1-210ENST00000488767 CBWD6Q4V339 395 aa13.72□□□□□ -0.21
PHF1-210ENST00000488767 CBWD3Q5JTY5 395 aa13.72□□□□□ -0.21
PHF1-210ENST00000488767 PRSS36Q5K4E3 855 aa13.72□□□□□ -0.21
PHF1-210ENST00000488767 CBWD5Q5RIA9 395 aa13.72□□□□□ -0.21
PHF1-210ENST00000488767 CCDC183Q5T5S1 534 aa13.72□□□□□ -0.21
PHF1-210ENST00000488767 TRIM67Q6ZTA4 783 aa13.72□□□□□ -0.21
PHF1-210ENST00000488767 E2F7Q96AV8 911 aa13.72□□□□□ -0.21
PHF1-210ENST00000488767 SPATA17Q96L03 361 aa13.72□□□□□ -0.21
PHF1-210ENST00000488767 NT5C1AQ9BXI3 368 aa13.72□□□□□ -0.21
PHF1-210ENST00000488767 BCO2Q9BYV7 579 aa13.72□□□□□ -0.21
PHF1-210ENST00000488767 ZFP14Q9HCL3 533 aa13.72□□□□□ -0.21
PHF1-210ENST00000488767 CRTAC1Q9NQ79 661 aa13.72□□□□□ -0.21
PHF1-210ENST00000488767 NUMBLQ9Y6R0 609 aa13.72□□□□□ -0.21
PHF1-210ENST00000488767 DPYSL4O14531 572 aa13.71□□□□□ -0.21
PHF1-210ENST00000488767 GPR37L1O60883 481 aa13.71□□□□□ -0.21
PHF1-210ENST00000488767 AFPP02771 609 aaKnown RBP13.71□□□□□ -0.21
PHF1-210ENST00000488767 RFX1P22670 979 aa13.71□□□□□ -0.21
PHF1-210ENST00000488767 MTIF2P46199 727 aaKnown RBP13.71□□□□□ -0.21
PHF1-210ENST00000488767 INCA1Q0VD86 236 aa13.71□□□□□ -0.21
PHF1-210ENST00000488767 TEAD2Q15562 447 aa13.71□□□□□ -0.21
PHF1-210ENST00000488767 DPCR1Q3MIW9 517 aa13.71□□□□□ -0.21
PHF1-210ENST00000488767 ACOT1Q86TX2 421 aa13.71□□□□□ -0.21
PHF1-210ENST00000488767 TMC8Q8IU68 726 aa13.71□□□□□ -0.21
PHF1-210ENST00000488767 TRIM59Q8IWR1 403 aa13.71□□□□□ -0.21
PHF1-210ENST00000488767 SHKBP1Q8TBC3 707 aa13.71□□□□□ -0.21
PHF1-210ENST00000488767 ZSCAN18Q8TBC5 510 aaPredicted RBP13.71□□□□□ -0.21
PHF1-210ENST00000488767 GPR152Q8TDT2 470 aa13.71□□□□□ -0.21
PHF1-210ENST00000488767 MRPS31Q92665 395 aaKnown RBP13.71□□□□□ -0.21
PHF1-210ENST00000488767 SMARCD2Q92925 531 aa13.71□□□□□ -0.21
PHF1-210ENST00000488767 TCEAL4Q96EI5 215 aa13.71□□□□□ -0.21
PHF1-210ENST00000488767 TRMT2BQ96GJ1 504 aaKnown RBP13.71□□□□□ -0.21
PHF1-210ENST00000488767 SMARCD1Q96GM5 515 aa13.71□□□□□ -0.21
PHF1-210ENST00000488767 CNOT6LQ96LI5 555 aaKnown RBP13.71□□□□□ -0.21
PHF1-210ENST00000488767 NT5C1BQ96P26 610 aa13.71□□□□□ -0.21
PHF1-210ENST00000488767 DPEP3Q9H4B8 488 aa13.71□□□□□ -0.21
PHF1-210ENST00000488767 APOBEC3GQ9HC16 384 aaKnown RBP13.71□□□□□ -0.21
PHF1-210ENST00000488767 DUSP12Q9UNI6 340 aa13.71□□□□□ -0.21
PHF1-210ENST00000488767 COQ4Q9Y3A0 265 aa13.71□□□□□ -0.21
PHF1-210ENST00000488767 TMEM221A6NGB7 291 aa13.7□□□□□ -0.22
PHF1-210ENST00000488767 SLC38A8A6NNN8 435 aa13.7□□□□□ -0.22
PHF1-210ENST00000488767 PRR33A8MZF0 331 aa13.7□□□□□ -0.22
PHF1-210ENST00000488767 M0R296 226 aa13.7□□□□□ -0.22
PHF1-210ENST00000488767 ECI2O75521 394 aa13.7□□□□□ -0.22
PHF1-210ENST00000488767 NOL4O94818 638 aa13.7□□□□□ -0.22
PHF1-210ENST00000488767 SRFP11831 508 aa13.7□□□□□ -0.22
PHF1-210ENST00000488767 DDX6P26196 483 aaKnown RBP eCLIP13.7□□□□□ -0.22
PHF1-210ENST00000488767 AVPR1AP37288 418 aa13.7□□□□□ -0.22
PHF1-210ENST00000488767 CCR2P41597 374 aa13.7□□□□□ -0.22
PHF1-210ENST00000488767 SLC8A3P57103 927 aa13.7□□□□□ -0.22
PHF1-210ENST00000488767 PFKPQ01813 784 aa13.7□□□□□ -0.22
PHF1-210ENST00000488767 KCNH2Q12809 1159 aa13.7□□□□□ -0.22
PHF1-210ENST00000488767 GPR158Q5T848 1215 aa13.7□□□□□ -0.22
PHF1-210ENST00000488767 PARM1Q6UWI2 310 aa13.7□□□□□ -0.22
PHF1-210ENST00000488767 DENND5BQ6ZUT9 1274 aa13.7□□□□□ -0.22
PHF1-210ENST00000488767 CRYBG2Q8N1P7 616 aa13.7□□□□□ -0.22
PHF1-210ENST00000488767 SLC44A3Q8N4M1 653 aa13.7□□□□□ -0.22
PHF1-210ENST00000488767 RSAD2Q8WXG1 361 aa13.7□□□□□ -0.22
PHF1-210ENST00000488767 SEMA4DQ92854 862 aa13.7□□□□□ -0.22
PHF1-210ENST00000488767 ELSPBP1Q96BH3 223 aa13.7□□□□□ -0.22
PHF1-210ENST00000488767 ELMO3Q96BJ8 720 aa13.7□□□□□ -0.22
PHF1-210ENST00000488767 C8orf48Q96LL4 319 aa13.7□□□□□ -0.22
PHF1-210ENST00000488767 MFSD1Q9H3U5 465 aa13.7□□□□□ -0.22
PHF1-210ENST00000488767 THAP9Q9H5L6 903 aa13.7□□□□□ -0.22
PHF1-210ENST00000488767 DMAP1Q9NPF5 467 aaPredicted RBP13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms