RNA–Protein interactions for RNA: ENST00000488727.5

CCM2-216, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,719 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-216ENST00000488727 FBXL5Q9UKA1 691 aa20.61■□□□□ 0.89
CCM2-216ENST00000488727 SSX2IPQ9Y2D8 614 aa20.61■□□□□ 0.89
CCM2-216ENST00000488727 BACE2Q9Y5Z0 518 aa20.61■□□□□ 0.89
CCM2-216ENST00000488727 P4HA1P13674 534 aa20.6■□□□□ 0.89
CCM2-216ENST00000488727 HGSNATQ68CP4 663 aa20.6■□□□□ 0.89
CCM2-216ENST00000488727 PHLDB3Q6NSJ2 640 aa20.6■□□□□ 0.89
CCM2-216ENST00000488727 DPY19L2P1Q6NXN4 242 aa20.6■□□□□ 0.89
CCM2-216ENST00000488727 METTL23Q86XA0 190 aa20.6■□□□□ 0.89
CCM2-216ENST00000488727 OR10T2Q8NGX3 314 aa20.6■□□□□ 0.89
CCM2-216ENST00000488727 KLHL5Q96PQ7 755 aa20.6■□□□□ 0.89
CCM2-216ENST00000488727 NSUN3Q9H649 340 aaKnown RBP20.6■□□□□ 0.89
CCM2-216ENST00000488727 SIX2Q9NPC8 291 aa20.6■□□□□ 0.89
CCM2-216ENST00000488727 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP20.6■□□□□ 0.89
CCM2-216ENST00000488727 FNIP2Q9P278 1114 aa20.6■□□□□ 0.89
CCM2-216ENST00000488727 PCDHA13Q9Y5I0 950 aa20.6■□□□□ 0.89
CCM2-216ENST00000488727 CDY1Q9Y6F8 540 aa20.6■□□□□ 0.89
CCM2-216ENST00000488727 H7C4K7 107 aa20.59■□□□□ 0.89
CCM2-216ENST00000488727 PER2O15055 1255 aa20.59■□□□□ 0.89
CCM2-216ENST00000488727 PJA2O43164 708 aa20.59■□□□□ 0.89
CCM2-216ENST00000488727 WARSP23381 471 aaKnown RBP20.59■□□□□ 0.89
CCM2-216ENST00000488727 LMO2P25791 158 aa20.59■□□□□ 0.89
CCM2-216ENST00000488727 SLC8B1Q6J4K2 584 aa20.59■□□□□ 0.89
CCM2-216ENST00000488727 RBM23Q86U06 439 aaKnown RBP20.59■□□□□ 0.89
CCM2-216ENST00000488727 KRT222Q8N1A0 295 aa20.59■□□□□ 0.89
CCM2-216ENST00000488727 SPATA18Q8TC71 538 aa20.59■□□□□ 0.89
CCM2-216ENST00000488727 KAT5Q92993 513 aa20.59■□□□□ 0.89
CCM2-216ENST00000488727 FAXDC2Q96IV6 333 aa20.59■□□□□ 0.89
CCM2-216ENST00000488727 TMEM209Q96SK2 561 aa20.59■□□□□ 0.89
CCM2-216ENST00000488727 GANQ9H2C0 597 aa20.59■□□□□ 0.89
CCM2-216ENST00000488727 DEF6Q9H4E7 631 aa20.59■□□□□ 0.89
CCM2-216ENST00000488727 DDX43Q9NXZ2 648 aaKnown RBP20.59■□□□□ 0.89
CCM2-216ENST00000488727 CTAGE15A4D2H0 777 aa20.58■□□□□ 0.89
CCM2-216ENST00000488727 SERPING1P05155 500 aa20.58■□□□□ 0.89
CCM2-216ENST00000488727 CTAGE8P0CG41 777 aa20.58■□□□□ 0.89
CCM2-216ENST00000488727 CYP27A1Q02318 531 aa20.58■□□□□ 0.89
CCM2-216ENST00000488727 CUL2Q13617 745 aa20.58■□□□□ 0.89
CCM2-216ENST00000488727 TCEAL5Q5H9L2 206 aa20.58■□□□□ 0.89
CCM2-216ENST00000488727 SFMBT2Q5VUG0 894 aa20.58■□□□□ 0.89
CCM2-216ENST00000488727 GJB7Q6PEY0 223 aa20.58■□□□□ 0.89
CCM2-216ENST00000488727 CTAGE6Q86UF2 777 aa20.58■□□□□ 0.89
CCM2-216ENST00000488727 CTAGE4Q8IX94 777 aa20.58■□□□□ 0.89
CCM2-216ENST00000488727 PPM1KQ8N3J5 372 aa20.58■□□□□ 0.89
CCM2-216ENST00000488727 SECISBP2LQ93073 1101 aaKnown RBP20.58■□□□□ 0.89
CCM2-216ENST00000488727 PARD6BQ9BYG5 372 aa20.58■□□□□ 0.89
CCM2-216ENST00000488727 PLCB1Q9NQ66 1216 aa20.58■□□□□ 0.89
CCM2-216ENST00000488727 HMGXB4Q9UGU5 601 aa20.58■□□□□ 0.89
CCM2-216ENST00000488727 TFR2Q9UP52 801 aa20.58■□□□□ 0.89
CCM2-216ENST00000488727 AKR1B10O60218 316 aa20.58■□□□□ 0.88
CCM2-216ENST00000488727 FAM163BP0C2L3 166 aa20.58■□□□□ 0.88
CCM2-216ENST00000488727 OR4Q2P0C623 313 aa20.58■□□□□ 0.88
CCM2-216ENST00000488727 ACAT1P24752 427 aaKnown RBP20.58■□□□□ 0.88
CCM2-216ENST00000488727 OR1D2P34982 312 aa20.58■□□□□ 0.88
CCM2-216ENST00000488727 NRIP1P48552 1158 aa20.58■□□□□ 0.88
CCM2-216ENST00000488727 LHX1P48742 406 aa20.58■□□□□ 0.88
CCM2-216ENST00000488727 NDUFV1P49821 464 aa20.58■□□□□ 0.88
CCM2-216ENST00000488727 CREMQ03060 361 aa20.58■□□□□ 0.88
CCM2-216ENST00000488727 BRD3Q15059 726 aa20.58■□□□□ 0.88
CCM2-216ENST00000488727 OR6B3Q8NGW1 331 aa20.58■□□□□ 0.88
CCM2-216ENST00000488727 EMILIN2Q9BXX0 1053 aa20.58■□□□□ 0.88
CCM2-216ENST00000488727 CYP3A43Q9HB55 503 aa20.58■□□□□ 0.88
CCM2-216ENST00000488727 RAB21Q9UL25 225 aa20.58■□□□□ 0.88
CCM2-216ENST00000488727 STXBP5LQ9Y2K9 1186 aa20.58■□□□□ 0.88
CCM2-216ENST00000488727 FHOD1Q9Y613 1164 aa20.58■□□□□ 0.88
CCM2-216ENST00000488727 SAR1BQ9Y6B6 198 aa20.58■□□□□ 0.88
CCM2-216ENST00000488727 CCDC151A5D8V7 595 aa20.57■□□□□ 0.88
CCM2-216ENST00000488727 CLASP2O75122 1294 aaKnown RBP20.57■□□□□ 0.88
CCM2-216ENST00000488727 ATP1A1P05023 1023 aaKnown RBP20.57■□□□□ 0.88
CCM2-216ENST00000488727 FOSL2P15408 326 aa20.57■□□□□ 0.88
CCM2-216ENST00000488727 CD58P19256 250 aa20.57■□□□□ 0.88
CCM2-216ENST00000488727 ROR1Q01973 937 aa20.57■□□□□ 0.88
CCM2-216ENST00000488727 CCDC142Q17RM4 750 aa20.57■□□□□ 0.88
CCM2-216ENST00000488727 CC2D1AQ6P1N0 951 aaPredicted RBP20.57■□□□□ 0.88
CCM2-216ENST00000488727 THEM5Q8N1Q8 247 aa20.57■□□□□ 0.88
CCM2-216ENST00000488727 TRIM58Q8NG06 486 aa20.57■□□□□ 0.88
CCM2-216ENST00000488727 TLE6Q9H808 572 aa20.57■□□□□ 0.88
CCM2-216ENST00000488727 ANKZF1Q9H8Y5 726 aa20.57■□□□□ 0.88
CCM2-216ENST00000488727 AIPL1Q9NZN9 384 aa20.57■□□□□ 0.88
CCM2-216ENST00000488727 APEX2Q9UBZ4 518 aa20.57■□□□□ 0.88
CCM2-216ENST00000488727 OR6C75A6NL08 312 aa20.56■□□□□ 0.88
CCM2-216ENST00000488727 ADH1AP07327 375 aa20.56■□□□□ 0.88
CCM2-216ENST00000488727 PNMA6AP0CW24 399 aaPredicted RBP20.56■□□□□ 0.88
CCM2-216ENST00000488727 GNL1P36915 607 aaPredicted RBP20.56■□□□□ 0.88
CCM2-216ENST00000488727 ARPP19P56211 112 aa20.56■□□□□ 0.88
CCM2-216ENST00000488727 GCNT1Q02742 428 aa20.56■□□□□ 0.88
CCM2-216ENST00000488727 INCA1Q0VD86 236 aa20.56■□□□□ 0.88
CCM2-216ENST00000488727 HYAL1Q12794 435 aa20.56■□□□□ 0.88
CCM2-216ENST00000488727 DUSP6Q16828 381 aa20.56■□□□□ 0.88
CCM2-216ENST00000488727 MICALL1Q8N3F8 863 aa20.56■□□□□ 0.88
CCM2-216ENST00000488727 UBR7Q8N806 425 aa20.56■□□□□ 0.88
CCM2-216ENST00000488727 KREMEN1Q96MU8 473 aa20.56■□□□□ 0.88
CCM2-216ENST00000488727 ACBD6Q9BR61 282 aa20.56■□□□□ 0.88
CCM2-216ENST00000488727 EPC1Q9H2F5 836 aa20.56■□□□□ 0.88
CCM2-216ENST00000488727 SNX25Q9H3E2 840 aa20.56■□□□□ 0.88
CCM2-216ENST00000488727 DPEP3Q9H4B8 488 aa20.56■□□□□ 0.88
CCM2-216ENST00000488727 CISHQ9NSE2 258 aa20.56■□□□□ 0.88
CCM2-216ENST00000488727 AJAP1Q9UKB5 411 aaPredicted RBP20.56■□□□□ 0.88
CCM2-216ENST00000488727 WDR27A2RRH5 827 aa20.56■□□□□ 0.88
CCM2-216ENST00000488727 ATP2C2O75185 946 aa20.56■□□□□ 0.88
CCM2-216ENST00000488727 TUBBP07437 444 aa20.56■□□□□ 0.88
CCM2-216ENST00000488727 PDGFRBP09619 1106 aa20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms