RNA–Protein interactions for RNA: ENST00000488683.1

CLIC4-202, Transcript of chloride intracellular channel 4, humanhuman

TSL 2

Gene CLIC4, Length 2,723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-202ENST00000488683 FAM71DQ8N9W8 422 aa13.34□□□□□ -0.27
CLIC4-202ENST00000488683 ACO2Q99798 780 aaKnown RBP13.34□□□□□ -0.27
CLIC4-202ENST00000488683 CALN1Q9BXU9 219 aa13.34□□□□□ -0.27
CLIC4-202ENST00000488683 PITPNM3Q9BZ71 974 aa13.34□□□□□ -0.27
CLIC4-202ENST00000488683 TRABDQ9H4I3 376 aa13.34□□□□□ -0.27
CLIC4-202ENST00000488683 TXNRD2Q9NNW7 524 aa13.34□□□□□ -0.27
CLIC4-202ENST00000488683 NKIRAS1Q9NYS0 192 aa13.34□□□□□ -0.27
CLIC4-202ENST00000488683 KCNG1Q9UIX4 513 aa13.34□□□□□ -0.27
CLIC4-202ENST00000488683 LRCH4O75427 683 aa13.33□□□□□ -0.27
CLIC4-202ENST00000488683 TOM1L1O75674 476 aa13.33□□□□□ -0.27
CLIC4-202ENST00000488683 HOXC6P09630 235 aa13.33□□□□□ -0.27
CLIC4-202ENST00000488683 RFC5P40937 340 aa13.33□□□□□ -0.27
CLIC4-202ENST00000488683 CTCFP49711 727 aaPredicted RBP13.33□□□□□ -0.27
CLIC4-202ENST00000488683 PSMC1P62191 440 aaKnown RBP13.33□□□□□ -0.27
CLIC4-202ENST00000488683 OASLQ15646 514 aaKnown RBP13.33□□□□□ -0.27
CLIC4-202ENST00000488683 C15orf59Q2T9L4 293 aaPredicted RBP13.33□□□□□ -0.27
CLIC4-202ENST00000488683 Q3C1V9 767 aa13.33□□□□□ -0.27
CLIC4-202ENST00000488683 SWT1Q5T5J6 900 aaKnown RBP13.33□□□□□ -0.27
CLIC4-202ENST00000488683 OTUD5Q96G74 571 aa13.33□□□□□ -0.27
CLIC4-202ENST00000488683 NIF3L1Q9GZT8 377 aa13.33□□□□□ -0.27
CLIC4-202ENST00000488683 NSRP1Q9H0G5 558 aaKnown RBP13.33□□□□□ -0.27
CLIC4-202ENST00000488683 TRIP11Q15643 1979 aa13.33□□□□□ -0.28
CLIC4-202ENST00000488683 A0A0G2JMZ2 1700 aa13.33□□□□□ -0.28
CLIC4-202ENST00000488683 LRRC37A2A6NM11 1700 aa13.33□□□□□ -0.28
CLIC4-202ENST00000488683 HCRTO43612 131 aa13.33□□□□□ -0.28
CLIC4-202ENST00000488683 FAM155BO75949 473 aa13.33□□□□□ -0.28
CLIC4-202ENST00000488683 CA4P22748 312 aa13.33□□□□□ -0.28
CLIC4-202ENST00000488683 TARSP26639 723 aaKnown RBP13.33□□□□□ -0.28
CLIC4-202ENST00000488683 ATP5DP30049 168 aa13.33□□□□□ -0.28
CLIC4-202ENST00000488683 BBS9Q3SYG4 887 aa13.33□□□□□ -0.28
CLIC4-202ENST00000488683 EAPPQ56P03 285 aaPredicted RBP13.33□□□□□ -0.28
CLIC4-202ENST00000488683 ZNF449Q6P9G9 518 aa13.33□□□□□ -0.28
CLIC4-202ENST00000488683 ZPBP2Q6X784 338 aa13.33□□□□□ -0.28
CLIC4-202ENST00000488683 LBX2Q6XYB7 198 aa13.33□□□□□ -0.28
CLIC4-202ENST00000488683 C12orf29Q8N999 325 aa13.33□□□□□ -0.28
CLIC4-202ENST00000488683 CHST13Q8NET6 341 aa13.33□□□□□ -0.28
CLIC4-202ENST00000488683 NLGN2Q8NFZ4 835 aa13.33□□□□□ -0.28
CLIC4-202ENST00000488683 RBM41Q96IZ5 413 aaKnown RBP13.33□□□□□ -0.28
CLIC4-202ENST00000488683 XYLT2Q9H1B5 865 aa13.33□□□□□ -0.28
CLIC4-202ENST00000488683 SYNCQ9H7C4 482 aa13.33□□□□□ -0.28
CLIC4-202ENST00000488683 ELP3Q9H9T3 547 aa13.33□□□□□ -0.28
CLIC4-202ENST00000488683 CPSF3Q9UKF6 684 aaKnown RBP13.33□□□□□ -0.28
CLIC4-202ENST00000488683 CLUHO75153 1309 aa13.33□□□□□ -0.28
CLIC4-202ENST00000488683 LOC102724159A0A0B4J2E5 919 aa13.33□□□□□ -0.28
CLIC4-202ENST00000488683 C3orf70A6NLC5 250 aaPredicted RBP13.33□□□□□ -0.28
CLIC4-202ENST00000488683 USP2O75604 605 aaPredicted RBP13.33□□□□□ -0.28
CLIC4-202ENST00000488683 TMEM63AO94886 807 aa13.33□□□□□ -0.28
CLIC4-202ENST00000488683 TJP3O95049 919 aa13.33□□□□□ -0.28
CLIC4-202ENST00000488683 ITGB3P05106 788 aa13.33□□□□□ -0.28
CLIC4-202ENST00000488683 CALB1P05937 261 aa13.33□□□□□ -0.28
CLIC4-202ENST00000488683 RDXP35241 583 aaKnown RBP13.33□□□□□ -0.28
CLIC4-202ENST00000488683 RGS7P49802 495 aa13.33□□□□□ -0.28
CLIC4-202ENST00000488683 BASP1P80723 227 aaKnown RBP13.33□□□□□ -0.28
CLIC4-202ENST00000488683 PWP2Q15269 919 aaKnown RBP13.33□□□□□ -0.28
CLIC4-202ENST00000488683 TFDP3Q5H9I0 405 aa13.33□□□□□ -0.28
CLIC4-202ENST00000488683 TRABD2AQ86V40 505 aa13.33□□□□□ -0.28
CLIC4-202ENST00000488683 BBOF1Q8ND07 529 aa13.33□□□□□ -0.28
CLIC4-202ENST00000488683 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.33□□□□□ -0.28
CLIC4-202ENST00000488683 KCNV2Q8TDN2 545 aa13.33□□□□□ -0.28
CLIC4-202ENST00000488683 MRPL4Q9BYD3 311 aaKnown RBP13.33□□□□□ -0.28
CLIC4-202ENST00000488683 MYLK2Q9H1R3 596 aa13.33□□□□□ -0.28
CLIC4-202ENST00000488683 NRBP2Q9NSY0 501 aa13.33□□□□□ -0.28
CLIC4-202ENST00000488683 CHMP2BQ9UQN3 213 aa13.33□□□□□ -0.28
CLIC4-202ENST00000488683 IRF6O14896 467 aa13.32□□□□□ -0.28
CLIC4-202ENST00000488683 CHUKO15111 745 aa13.32□□□□□ -0.28
CLIC4-202ENST00000488683 KRT3P12035 628 aa13.32□□□□□ -0.28
CLIC4-202ENST00000488683 KRT4P19013 534 aa13.32□□□□□ -0.28
CLIC4-202ENST00000488683 EDNRBP24530 442 aa13.32□□□□□ -0.28
CLIC4-202ENST00000488683 ERFP50548 548 aa13.32□□□□□ -0.28
CLIC4-202ENST00000488683 VCPP55072 806 aaKnown RBP13.32□□□□□ -0.28
CLIC4-202ENST00000488683 STAT4Q14765 748 aa13.32□□□□□ -0.28
CLIC4-202ENST00000488683 DUOXA2Q1HG44 320 aa13.32□□□□□ -0.28
CLIC4-202ENST00000488683 RNASEH2BQ5TBB1 312 aaKnown RBP13.32□□□□□ -0.28
CLIC4-202ENST00000488683 C1orf228Q6PIY5 440 aa13.32□□□□□ -0.28
CLIC4-202ENST00000488683 APOBEC3FQ8IUX4 373 aaKnown RBP13.32□□□□□ -0.28
CLIC4-202ENST00000488683 TMEM35BQ8NCS4 154 aa13.32□□□□□ -0.28
CLIC4-202ENST00000488683 AGAP11Q8TF27 550 aa13.32□□□□□ -0.28
CLIC4-202ENST00000488683 SLC16A10Q8TF71 515 aa13.32□□□□□ -0.28
CLIC4-202ENST00000488683 KLHL29Q96CT2 875 aa13.32□□□□□ -0.28
CLIC4-202ENST00000488683 PEBP4Q96S96 227 aa13.32□□□□□ -0.28
CLIC4-202ENST00000488683 RNPEPQ9H4A4 650 aa13.32□□□□□ -0.28
CLIC4-202ENST00000488683 SLC17A7Q9P2U7 560 aa13.32□□□□□ -0.28
CLIC4-202ENST00000488683 SIX4Q9UIU6 781 aa13.32□□□□□ -0.28
CLIC4-202ENST00000488683 HAO1Q9UJM8 370 aa13.32□□□□□ -0.28
CLIC4-202ENST00000488683 GINS2Q9Y248 185 aa13.32□□□□□ -0.28
CLIC4-202ENST00000488683 SNCAIPQ9Y6H5 919 aa13.32□□□□□ -0.28
CLIC4-202ENST00000488683 GPR25O00155 361 aa13.32□□□□□ -0.28
CLIC4-202ENST00000488683 NOP56O00567 594 aaKnown RBP13.32□□□□□ -0.28
CLIC4-202ENST00000488683 OGTO15294 1046 aa13.32□□□□□ -0.28
CLIC4-202ENST00000488683 MGRN1O60291 552 aa13.32□□□□□ -0.28
CLIC4-202ENST00000488683 SUN1O94901 812 aa13.32□□□□□ -0.28
CLIC4-202ENST00000488683 ADRA1DP25100 572 aa13.32□□□□□ -0.28
CLIC4-202ENST00000488683 ATP11AP98196 1134 aa13.32□□□□□ -0.28
CLIC4-202ENST00000488683 CCDC142Q17RM4 750 aa13.32□□□□□ -0.28
CLIC4-202ENST00000488683 TRNP1Q6NT89 227 aa13.32□□□□□ -0.28
CLIC4-202ENST00000488683 RFX6Q8HWS3 928 aa13.32□□□□□ -0.28
CLIC4-202ENST00000488683 CPT1BQ92523 772 aa13.32□□□□□ -0.28
CLIC4-202ENST00000488683 DCTN4Q9UJW0 460 aa13.32□□□□□ -0.28
CLIC4-202ENST00000488683 PHTF1Q9UMS5 762 aa13.32□□□□□ -0.28
CLIC4-202ENST00000488683 FAM47DPA6NHR8 397 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms