RNA–Protein interactions for RNA: ENST00000488171.5

CD55-209, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 3

Gene CD55, Length 1,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-209ENST00000488171 RPL10AP62906 217 aaKnown RBP20.71■□□□□ 0.91
CD55-209ENST00000488171 TSSK4Q6SA08 328 aa20.71■□□□□ 0.91
CD55-209ENST00000488171 SPATA2LQ8IUW3 424 aaPredicted RBP20.71■□□□□ 0.91
CD55-209ENST00000488171 MAB21L3Q8N8X9 362 aa20.71■□□□□ 0.91
CD55-209ENST00000488171 ZNF516Q92618 1163 aa20.71■□□□□ 0.91
CD55-209ENST00000488171 NELL1Q92832 810 aa20.71■□□□□ 0.91
CD55-209ENST00000488171 CCDC127Q96BQ5 260 aa20.71■□□□□ 0.91
CD55-209ENST00000488171 PAGE5Q96GU1 130 aa20.71■□□□□ 0.91
CD55-209ENST00000488171 MSANTD3Q96H12 275 aa20.71■□□□□ 0.91
CD55-209ENST00000488171 FUBP3Q96I24 572 aaKnown RBP eCLIP20.71■□□□□ 0.91
CD55-209ENST00000488171 SYT15Q9BQS2 421 aa20.71■□□□□ 0.91
CD55-209ENST00000488171 C8orf33Q9H7E9 229 aaPredicted RBP20.71■□□□□ 0.91
CD55-209ENST00000488171 LMAN1LQ9HAT1 526 aa20.71■□□□□ 0.91
CD55-209ENST00000488171 GTSE1Q9NYZ3 720 aa20.71■□□□□ 0.91
CD55-209ENST00000488171 CGNQ9P2M7 1197 aaKnown RBP20.71■□□□□ 0.91
CD55-209ENST00000488171 ZMYM5Q9UJ78 669 aa20.71■□□□□ 0.91
CD55-209ENST00000488171 WARSP23381 471 aaKnown RBP20.7■□□□□ 0.9
CD55-209ENST00000488171 DDX6P26196 483 aaKnown RBP eCLIP20.7■□□□□ 0.9
CD55-209ENST00000488171 KPNA1P52294 538 aaPredicted RBP20.7■□□□□ 0.9
CD55-209ENST00000488171 PSMC1P62191 440 aaKnown RBP20.7■□□□□ 0.9
CD55-209ENST00000488171 TNK2Q07912 1038 aa20.7■□□□□ 0.9
CD55-209ENST00000488171 WDR44Q5JSH3 913 aa20.7■□□□□ 0.9
CD55-209ENST00000488171 TXNDC8Q6A555 127 aa20.7■□□□□ 0.9
CD55-209ENST00000488171 MAMSTRQ6ZN01 415 aa20.7■□□□□ 0.9
CD55-209ENST00000488171 CELF5Q8N6W0 485 aaKnown RBP20.7■□□□□ 0.9
CD55-209ENST00000488171 TTC8Q8TAM2 541 aa20.7■□□□□ 0.9
CD55-209ENST00000488171 TRMT2BQ96GJ1 504 aaKnown RBP20.7■□□□□ 0.9
CD55-209ENST00000488171 MYRFLQ96LU7 910 aa20.7■□□□□ 0.9
CD55-209ENST00000488171 FNBP1Q96RU3 617 aa20.7■□□□□ 0.9
CD55-209ENST00000488171 CRTAC1Q9NQ79 661 aa20.7■□□□□ 0.9
CD55-209ENST00000488171 CDH9Q9ULB4 789 aa20.7■□□□□ 0.9
CD55-209ENST00000488171 CCL26Q9Y258 94 aa20.7■□□□□ 0.9
CD55-209ENST00000488171 A0A1B0GVL5 298 aa20.69■□□□□ 0.9
CD55-209ENST00000488171 SPECC1L-ADORA2AF8WAN1 911 aa20.69■□□□□ 0.9
CD55-209ENST00000488171 PFKFB1P16118 471 aa20.69■□□□□ 0.9
CD55-209ENST00000488171 CMA1P23946 247 aa20.69■□□□□ 0.9
CD55-209ENST00000488171 CTHP32929 405 aa20.69■□□□□ 0.9
CD55-209ENST00000488171 MAGEA11P43364 429 aa20.69■□□□□ 0.9
CD55-209ENST00000488171 PLCB2Q00722 1185 aa20.69■□□□□ 0.9
CD55-209ENST00000488171 STK4Q13043 487 aa20.69■□□□□ 0.9
CD55-209ENST00000488171 C1orf228Q6PIY5 440 aa20.69■□□□□ 0.9
CD55-209ENST00000488171 TXNDC11Q6PKC3 985 aa20.69■□□□□ 0.9
CD55-209ENST00000488171 SUMF1Q8NBK3 374 aa20.69■□□□□ 0.9
CD55-209ENST00000488171 ZBTB44Q8NCP5 570 aa20.69■□□□□ 0.9
CD55-209ENST00000488171 KIAA0895Q8NCT3 520 aa20.69■□□□□ 0.9
CD55-209ENST00000488171 USP13Q92995 863 aaPredicted RBP20.69■□□□□ 0.9
CD55-209ENST00000488171 MMS19Q96T76 1030 aa20.69■□□□□ 0.9
CD55-209ENST00000488171 MRPL45Q9BRJ2 306 aaKnown RBP20.69■□□□□ 0.9
CD55-209ENST00000488171 IER2Q9BTL4 223 aa20.69■□□□□ 0.9
CD55-209ENST00000488171 UXTQ9UBK9 157 aaPredicted RBP20.69■□□□□ 0.9
CD55-209ENST00000488171 HPSEQ9Y251 543 aa20.69■□□□□ 0.9
CD55-209ENST00000488171 NME7Q9Y5B8 376 aa20.69■□□□□ 0.9
CD55-209ENST00000488171 PCDHGA2Q9Y5H1 932 aa20.69■□□□□ 0.9
CD55-209ENST00000488171 GTF3C3Q9Y5Q9 886 aa20.69■□□□□ 0.9
CD55-209ENST00000488171 F5P12259 2224 aa20.69■□□□□ 0.9
CD55-209ENST00000488171 SOBPA7XYQ1 873 aa20.68■□□□□ 0.9
CD55-209ENST00000488171 KINO60870 393 aaKnown RBP20.68■□□□□ 0.9
CD55-209ENST00000488171 TDGF1P13385 188 aa20.68■□□□□ 0.9
CD55-209ENST00000488171 AVPR1AP37288 418 aa20.68■□□□□ 0.9
CD55-209ENST00000488171 GAS6Q14393 721 aa20.68■□□□□ 0.9
CD55-209ENST00000488171 MON1AQ86VX9 555 aa20.68■□□□□ 0.9
CD55-209ENST00000488171 RALGPS2Q86X27 583 aaPredicted RBP20.68■□□□□ 0.9
CD55-209ENST00000488171 SCN4BQ8IWT1 228 aa20.68■□□□□ 0.9
CD55-209ENST00000488171 RIN3Q8TB24 985 aa20.68■□□□□ 0.9
CD55-209ENST00000488171 PLEKHO2Q8TD55 490 aa20.68■□□□□ 0.9
CD55-209ENST00000488171 MRPS31Q92665 395 aaKnown RBP20.68■□□□□ 0.9
CD55-209ENST00000488171 MYLPFQ96A32 169 aa20.68■□□□□ 0.9
CD55-209ENST00000488171 ZSCAN32Q9NX65 697 aa20.68■□□□□ 0.9
CD55-209ENST00000488171 FAM186AA6NE01 2351 aa20.67■□□□□ 0.9
CD55-209ENST00000488171 PDGFRBP09619 1106 aa20.67■□□□□ 0.9
CD55-209ENST00000488171 CASP4P49662 377 aa20.67■□□□□ 0.9
CD55-209ENST00000488171 KMT5BQ4FZB7 885 aa20.67■□□□□ 0.9
CD55-209ENST00000488171 C4orf50Q6ZRC1 276 aa20.67■□□□□ 0.9
CD55-209ENST00000488171 SPATA32Q96LK8 384 aa20.67■□□□□ 0.9
CD55-209ENST00000488171 FAM83CQ9BQN1 747 aa20.67■□□□□ 0.9
CD55-209ENST00000488171 GKN1Q9NS71 199 aa20.67■□□□□ 0.9
CD55-209ENST00000488171 RBM12Q9NTZ6 932 aaKnown RBP20.67■□□□□ 0.9
CD55-209ENST00000488171 TDP1Q9NUW8 608 aa20.67■□□□□ 0.9
CD55-209ENST00000488171 EXOC1Q9NV70 894 aa20.67■□□□□ 0.9
CD55-209ENST00000488171 THG1LQ9NWX6 298 aaKnown RBP20.67■□□□□ 0.9
CD55-209ENST00000488171 MAGEC2Q9UBF1 373 aaPredicted RBP20.67■□□□□ 0.9
CD55-209ENST00000488171 PTPRDP23468 1912 aa20.67■□□□□ 0.9
CD55-209ENST00000488171 GREB1Q4ZG55 1949 aa20.67■□□□□ 0.9
CD55-209ENST00000488171 RIF1Q5UIP0 2472 aaKnown RBP20.66■□□□□ 0.9
CD55-209ENST00000488171 EXOC3O60645 756 aa20.66■□□□□ 0.9
CD55-209ENST00000488171 LILRB5O75023 590 aa20.66■□□□□ 0.9
CD55-209ENST00000488171 TACC1O75410 805 aa20.66■□□□□ 0.9
CD55-209ENST00000488171 STAU1O95793 577 aaKnown RBP20.66■□□□□ 0.9
CD55-209ENST00000488171 BDNFP23560 247 aa20.66■□□□□ 0.9
CD55-209ENST00000488171 KRT85P78386 507 aa20.66■□□□□ 0.9
CD55-209ENST00000488171 GOLGA5Q8TBA6 731 aa20.66■□□□□ 0.9
CD55-209ENST00000488171 MYCBPAPQ8TBZ2 947 aa20.66■□□□□ 0.9
CD55-209ENST00000488171 ATRIPQ8WXE1 791 aa20.66■□□□□ 0.9
CD55-209ENST00000488171 PCED1BQ96HM7 432 aa20.66■□□□□ 0.9
CD55-209ENST00000488171 XYLT2Q9H1B5 865 aa20.66■□□□□ 0.9
CD55-209ENST00000488171 DMAC2Q9NW81 257 aa20.66■□□□□ 0.9
CD55-209ENST00000488171 USP25Q9UHP3 1055 aa20.66■□□□□ 0.9
CD55-209ENST00000488171 PTPRZ1P23471 2315 aaPredicted RBP20.66■□□□□ 0.9
CD55-209ENST00000488171 FAM163BP0C2L3 166 aa20.65■□□□□ 0.9
CD55-209ENST00000488171 GNL1P36915 607 aaPredicted RBP20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms