RNA–Protein interactions for RNA: ENST00000488146.5

DEPDC1-203, Transcript of DEP domain containing 1, humanhuman

TSL 2

Gene DEPDC1, Length 2,658 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-203ENST00000488146 KLF4O43474 513 aa2.97□□□□□ -1.93
DEPDC1-203ENST00000488146 TGM5O43548 720 aa2.97□□□□□ -1.93
DEPDC1-203ENST00000488146 ERLIN2O94905 339 aa2.97□□□□□ -1.93
DEPDC1-203ENST00000488146 LATS1O95835 1130 aa2.97□□□□□ -1.93
DEPDC1-203ENST00000488146 FAM86B2P0C5J1 330 aa2.97□□□□□ -1.93
DEPDC1-203ENST00000488146 GOLGA8HP0CJ92 632 aa2.97□□□□□ -1.93
DEPDC1-203ENST00000488146 GUCY2CP25092 1073 aa2.97□□□□□ -1.93
DEPDC1-203ENST00000488146 TUFMP49411 452 aaKnown RBP2.97□□□□□ -1.93
DEPDC1-203ENST00000488146 CHMP4BP1P59074 171 aa2.97□□□□□ -1.93
DEPDC1-203ENST00000488146 CTBSQ01459 385 aa2.97□□□□□ -1.93
DEPDC1-203ENST00000488146 AKAP17AQ02040 695 aaKnown RBP2.97□□□□□ -1.93
DEPDC1-203ENST00000488146 CLCQ05315 142 aa2.97□□□□□ -1.93
DEPDC1-203ENST00000488146 LAMTOR4Q0VGL1 99 aa2.97□□□□□ -1.93
DEPDC1-203ENST00000488146 MTA1Q13330 715 aa2.97□□□□□ -1.93
DEPDC1-203ENST00000488146 UBAP2LQ14157 1087 aaKnown RBP2.97□□□□□ -1.93
DEPDC1-203ENST00000488146 NTRK3Q16288 839 aa2.97□□□□□ -1.93
DEPDC1-203ENST00000488146 PABPC1LQ4VXU2 614 aaKnown RBP2.97□□□□□ -1.93
DEPDC1-203ENST00000488146 EFHC2Q5JST6 749 aa2.97□□□□□ -1.93
DEPDC1-203ENST00000488146 SNX30Q5VWJ9 437 aa2.97□□□□□ -1.93
DEPDC1-203ENST00000488146 CEP135Q66GS9 1140 aa2.97□□□□□ -1.93
DEPDC1-203ENST00000488146 HAUS3Q68CZ6 603 aa2.97□□□□□ -1.93
DEPDC1-203ENST00000488146 SLC23A3Q6PIS1 610 aa2.97□□□□□ -1.93
DEPDC1-203ENST00000488146 DBX2Q6ZNG2 339 aa2.97□□□□□ -1.93
DEPDC1-203ENST00000488146 SPATC1Q76KD6 591 aa2.97□□□□□ -1.93
DEPDC1-203ENST00000488146 FCHSD1Q86WN1 690 aa2.97□□□□□ -1.93
DEPDC1-203ENST00000488146 TMEM86AQ8N2M4 240 aa2.97□□□□□ -1.93
DEPDC1-203ENST00000488146 CPA6Q8N4T0 437 aa2.97□□□□□ -1.93
DEPDC1-203ENST00000488146 SPPL2BQ8TCT7 592 aa2.97□□□□□ -1.93
DEPDC1-203ENST00000488146 FRMD6Q96NE9 622 aa2.97□□□□□ -1.93
DEPDC1-203ENST00000488146 NACC1Q96RE7 527 aa2.97□□□□□ -1.93
DEPDC1-203ENST00000488146 FERD3LQ96RJ6 166 aa2.97□□□□□ -1.93
DEPDC1-203ENST00000488146 KIF2CQ99661 725 aa2.97□□□□□ -1.93
DEPDC1-203ENST00000488146 HSD17B14Q9BPX1 270 aa2.97□□□□□ -1.93
DEPDC1-203ENST00000488146 TRMT61BQ9BVS5 477 aaKnown RBP2.97□□□□□ -1.93
DEPDC1-203ENST00000488146 ZNF334Q9HCZ1 680 aaPredicted RBP2.97□□□□□ -1.93
DEPDC1-203ENST00000488146 CGNQ9P2M7 1197 aaKnown RBP2.97□□□□□ -1.93
DEPDC1-203ENST00000488146 NAGPAQ9UK23 515 aa2.97□□□□□ -1.93
DEPDC1-203ENST00000488146 TRIM33Q9UPN9 1127 aa2.97□□□□□ -1.93
DEPDC1-203ENST00000488146 NUMBLQ9Y6R0 609 aa2.97□□□□□ -1.93
DEPDC1-203ENST00000488146 UBE4BO95155 1302 aa2.97□□□□□ -1.93
DEPDC1-203ENST00000488146 NOTCH4Q99466 2003 aa2.97□□□□□ -1.93
DEPDC1-203ENST00000488146 DOCK8Q8NF50 2099 aa2.97□□□□□ -1.93
DEPDC1-203ENST00000488146 BCLAF3A2AJT9 711 aaKnown RBP2.97□□□□□ -1.93
DEPDC1-203ENST00000488146 ZNF263O14978 683 aa2.97□□□□□ -1.93
DEPDC1-203ENST00000488146 EFSO43281 561 aa2.97□□□□□ -1.93
DEPDC1-203ENST00000488146 TACC1O75410 805 aa2.97□□□□□ -1.93
DEPDC1-203ENST00000488146 ALDH1A2O94788 518 aa2.97□□□□□ -1.93
DEPDC1-203ENST00000488146 THP07101 528 aa2.97□□□□□ -1.93
DEPDC1-203ENST00000488146 FGFR1P11362 822 aa2.97□□□□□ -1.93
DEPDC1-203ENST00000488146 CYP11B2P19099 503 aa2.97□□□□□ -1.93
DEPDC1-203ENST00000488146 HSPA4P34932 840 aa2.97□□□□□ -1.93
DEPDC1-203ENST00000488146 RNASELQ05823 741 aaKnown RBP2.97□□□□□ -1.93
DEPDC1-203ENST00000488146 TNP2Q05952 138 aa2.97□□□□□ -1.93
DEPDC1-203ENST00000488146 SCRN1Q12765 414 aa2.97□□□□□ -1.93
DEPDC1-203ENST00000488146 GPR17Q13304 367 aa2.97□□□□□ -1.93
DEPDC1-203ENST00000488146 SURF1Q15526 300 aa2.97□□□□□ -1.93
DEPDC1-203ENST00000488146 ELF2Q15723 593 aa2.97□□□□□ -1.93
DEPDC1-203ENST00000488146 IL31Q6EBC2 164 aa2.97□□□□□ -1.93
DEPDC1-203ENST00000488146 CNNM4Q6P4Q7 775 aa2.97□□□□□ -1.93
DEPDC1-203ENST00000488146 SPRED2Q7Z698 418 aa2.97□□□□□ -1.93
DEPDC1-203ENST00000488146 NEK8Q86SG6 692 aa2.97□□□□□ -1.93
DEPDC1-203ENST00000488146 TMC8Q8IU68 726 aa2.97□□□□□ -1.93
DEPDC1-203ENST00000488146 BLIDQ8IZY5 108 aa2.97□□□□□ -1.93
DEPDC1-203ENST00000488146 OXR1Q8N573 874 aa2.97□□□□□ -1.93
DEPDC1-203ENST00000488146 KDM1BQ8NB78 822 aa2.97□□□□□ -1.93
DEPDC1-203ENST00000488146 CSGALNACT1Q8TDX6 532 aa2.97□□□□□ -1.93
DEPDC1-203ENST00000488146 BCL7CQ8WUZ0 217 aaPredicted RBP2.97□□□□□ -1.93
DEPDC1-203ENST00000488146 FAM3CQ92520 227 aa2.97□□□□□ -1.93
DEPDC1-203ENST00000488146 TNFRSF25Q93038 417 aa2.97□□□□□ -1.93
DEPDC1-203ENST00000488146 PSMG2Q969U7 264 aa2.97□□□□□ -1.93
DEPDC1-203ENST00000488146 CCDC136Q96JN2 1154 aa2.97□□□□□ -1.93
DEPDC1-203ENST00000488146 GCNAQ96QF7 691 aa2.97□□□□□ -1.93
DEPDC1-203ENST00000488146 CDC6Q99741 560 aa2.97□□□□□ -1.93
DEPDC1-203ENST00000488146 TTLL2Q9BWV7 592 aa2.97□□□□□ -1.93
DEPDC1-203ENST00000488146 DNAI2Q9GZS0 605 aa2.97□□□□□ -1.93
DEPDC1-203ENST00000488146 FAM49AQ9H0Q0 323 aaPredicted RBP2.97□□□□□ -1.93
DEPDC1-203ENST00000488146 DUSP15Q9H1R2 295 aaPredicted RBP2.97□□□□□ -1.93
DEPDC1-203ENST00000488146 CRISPLD1Q9H336 500 aa2.97□□□□□ -1.93
DEPDC1-203ENST00000488146 TASP1Q9H6P5 420 aa2.97□□□□□ -1.93
DEPDC1-203ENST00000488146 PTPRHQ9HD43 1115 aa2.97□□□□□ -1.93
DEPDC1-203ENST00000488146 SEMA4GQ9NTN9 838 aa2.97□□□□□ -1.93
DEPDC1-203ENST00000488146 MARK1Q9P0L2 795 aa2.97□□□□□ -1.93
DEPDC1-203ENST00000488146 DNMT3BQ9UBC3 853 aaKnown RBP2.97□□□□□ -1.93
DEPDC1-203ENST00000488146 ODF2LQ9ULJ1 636 aa2.97□□□□□ -1.93
DEPDC1-203ENST00000488146 G3BP2Q9UN86 482 aaKnown RBP2.97□□□□□ -1.93
DEPDC1-203ENST00000488146 CORINQ9Y5Q5 1042 aa2.97□□□□□ -1.93
DEPDC1-203ENST00000488146 STYXL1Q9Y6J8 313 aa2.97□□□□□ -1.93
DEPDC1-203ENST00000488146 REC8O95072 547 aa2.96□□□□□ -1.93
DEPDC1-203ENST00000488146 IL18RAPO95256 599 aa2.96□□□□□ -1.93
DEPDC1-203ENST00000488146 PLEKHA8P1O95397 391 aa2.96□□□□□ -1.93
DEPDC1-203ENST00000488146 OLFM2O95897 454 aa2.96□□□□□ -1.93
DEPDC1-203ENST00000488146 LRG1P02750 347 aa2.96□□□□□ -1.93
DEPDC1-203ENST00000488146 C8AP07357 584 aa2.96□□□□□ -1.93
DEPDC1-203ENST00000488146 VSIG8P0DPA2 414 aa2.96□□□□□ -1.93
DEPDC1-203ENST00000488146 MARCKSP29966 332 aaPredicted RBP2.96□□□□□ -1.93
DEPDC1-203ENST00000488146 OXTRP30559 389 aa2.96□□□□□ -1.93
DEPDC1-203ENST00000488146 METAP2P50579 478 aaKnown RBP eCLIP2.96□□□□□ -1.93
DEPDC1-203ENST00000488146 UCNP55089 124 aa2.96□□□□□ -1.93
DEPDC1-203ENST00000488146 MCL1Q07820 350 aa2.96□□□□□ -1.93
DEPDC1-203ENST00000488146 MAPRE1Q15691 268 aaKnown RBP2.96□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms