RNA–Protein interactions for RNA: ENST00000487939.1

PTEN-204, Transcript of phosphatase and tensin homolog, humanhuman

TSL 3

Gene PTEN, Length 477 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTEN-204ENST00000487939 DDX21Q9NR30 783 aaKnown RBP eCLIP5.47□□□□□ -1.53
PTEN-204ENST00000487939 KLC4Q9NSK0 619 aa5.47□□□□□ -1.53
PTEN-204ENST00000487939 SACM1LQ9NTJ5 587 aa5.47□□□□□ -1.53
PTEN-204ENST00000487939 TRIM43BA6NCK2 446 aa5.46□□□□□ -1.54
PTEN-204ENST00000487939 MBD3L4A6NDZ8 208 aaPredicted RBP5.46□□□□□ -1.54
PTEN-204ENST00000487939 MBD3L3A6NE82 208 aaPredicted RBP5.46□□□□□ -1.54
PTEN-204ENST00000487939 OVOL3O00110 214 aa5.46□□□□□ -1.54
PTEN-204ENST00000487939 FOXN3O00409 490 aaPredicted RBP5.46□□□□□ -1.54
PTEN-204ENST00000487939 CHRM2P08172 466 aa5.46□□□□□ -1.54
PTEN-204ENST00000487939 ZKSCAN1P17029 563 aaPredicted RBP5.46□□□□□ -1.54
PTEN-204ENST00000487939 TYRP1P17643 537 aa5.46□□□□□ -1.54
PTEN-204ENST00000487939 HNRNPMP52272 730 aaKnown RBP eCLIP5.46□□□□□ -1.543e-6■■■□□ 14.8
PTEN-204ENST00000487939 KRT17Q04695 432 aa5.46□□□□□ -1.54
PTEN-204ENST00000487939 E2F2Q14209 437 aa5.46□□□□□ -1.54
PTEN-204ENST00000487939 ZNF169Q14929 603 aaPredicted RBP5.46□□□□□ -1.54
PTEN-204ENST00000487939 ARHGAP40Q5TG30 622 aa5.46□□□□□ -1.54
PTEN-204ENST00000487939 CCDC181Q5TID7 509 aa5.46□□□□□ -1.54
PTEN-204ENST00000487939 VPS53Q5VIR6 699 aa5.46□□□□□ -1.54
PTEN-204ENST00000487939 KAZNQ674X7 775 aa5.46□□□□□ -1.54
PTEN-204ENST00000487939 TSHZ1Q6ZSZ6 1077 aa5.46□□□□□ -1.54
PTEN-204ENST00000487939 CCAR1Q8IX12 1150 aaKnown RBP5.46□□□□□ -1.54
PTEN-204ENST00000487939 CAGE1Q8TC20 777 aa5.46□□□□□ -1.54
PTEN-204ENST00000487939 FKBP10Q96AY3 582 aa5.46□□□□□ -1.54
PTEN-204ENST00000487939 TRIM43Q96BQ3 446 aaPredicted RBP5.46□□□□□ -1.54
PTEN-204ENST00000487939 AGAP2Q99490 1192 aa5.46□□□□□ -1.54
PTEN-204ENST00000487939 MESP1Q9BRJ9 268 aa5.46□□□□□ -1.54
PTEN-204ENST00000487939 CPNE7Q9UBL6 633 aa5.46□□□□□ -1.54
PTEN-204ENST00000487939 TLR5O60602 858 aa5.45□□□□□ -1.54
PTEN-204ENST00000487939 CAND2O75155 1236 aa5.45□□□□□ -1.54
PTEN-204ENST00000487939 NXPH3O95157 252 aa5.45□□□□□ -1.54
PTEN-204ENST00000487939 LMNAP02545 664 aaKnown RBP5.45□□□□□ -1.54
PTEN-204ENST00000487939 KLRC1P26715 233 aa5.45□□□□□ -1.54
PTEN-204ENST00000487939 FMO1Q01740 532 aa5.45□□□□□ -1.54
PTEN-204ENST00000487939 KRT78Q8N1N4 520 aa5.45□□□□□ -1.54
PTEN-204ENST00000487939 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.45□□□□□ -1.54
PTEN-204ENST00000487939 ATRIPQ8WXE1 791 aa5.45□□□□□ -1.54
PTEN-204ENST00000487939 TFAP2BQ92481 460 aa5.45□□□□□ -1.54
PTEN-204ENST00000487939 PDLIM2Q96JY6 352 aa5.45□□□□□ -1.54
PTEN-204ENST00000487939 PBKQ96KB5 322 aa5.45□□□□□ -1.54
PTEN-204ENST00000487939 SARGQ9BW04 601 aa5.45□□□□□ -1.54
PTEN-204ENST00000487939 STK32BQ9NY57 414 aa5.45□□□□□ -1.54
PTEN-204ENST00000487939 EHD3Q9NZN3 535 aa5.45□□□□□ -1.54
PTEN-204ENST00000487939 PCDHGB6Q9Y5F9 930 aa5.45□□□□□ -1.54
PTEN-204ENST00000487939 ADGRA2Q96PE1 1338 aa5.45□□□□□ -1.54
PTEN-204ENST00000487939 PRC1O43663 620 aa5.44□□□□□ -1.54
PTEN-204ENST00000487939 PQBP1O60828 265 aaKnown RBP5.44□□□□□ -1.54
PTEN-204ENST00000487939 GNALP38405 381 aa5.44□□□□□ -1.54
PTEN-204ENST00000487939 GRIA3P42263 894 aa5.44□□□□□ -1.54
PTEN-204ENST00000487939 TXNRD1Q16881 649 aa5.44□□□□□ -1.54
PTEN-204ENST00000487939 INSCQ1MX18 579 aa5.44□□□□□ -1.54
PTEN-204ENST00000487939 PLA1AQ53H76 456 aa5.44□□□□□ -1.54
PTEN-204ENST00000487939 PRR16Q569H4 304 aa5.44□□□□□ -1.54
PTEN-204ENST00000487939 PLAC9Q5JTB6 97 aa5.44□□□□□ -1.54
PTEN-204ENST00000487939 ZNF618Q5T7W0 954 aa5.44□□□□□ -1.54
PTEN-204ENST00000487939 DCAF12L1Q5VU92 463 aa5.44□□□□□ -1.54
PTEN-204ENST00000487939 RGS7BPQ6MZT1 257 aaPredicted RBP5.44□□□□□ -1.54
PTEN-204ENST00000487939 OLFML1Q6UWY5 402 aa5.44□□□□□ -1.54
PTEN-204ENST00000487939 DTX2Q86UW9 622 aa5.44□□□□□ -1.54
PTEN-204ENST00000487939 MICU3Q86XE3 530 aa5.44□□□□□ -1.54
PTEN-204ENST00000487939 SLC15A3Q8IY34 581 aa5.44□□□□□ -1.54
PTEN-204ENST00000487939 GPR150Q8NGU9 434 aa5.44□□□□□ -1.54
PTEN-204ENST00000487939 IPCEF1Q8WWN9 437 aaPredicted RBP5.44□□□□□ -1.54
PTEN-204ENST00000487939 MAML1Q92585 1016 aa5.44□□□□□ -1.54
PTEN-204ENST00000487939 SPSB4Q96A44 273 aa5.44□□□□□ -1.54
PTEN-204ENST00000487939 MSLNLQ96KJ4 702 aa5.44□□□□□ -1.54
PTEN-204ENST00000487939 PPP1R9BQ96SB3 815 aa5.44□□□□□ -1.54
PTEN-204ENST00000487939 DUSP26Q9BV47 211 aa5.44□□□□□ -1.54
PTEN-204ENST00000487939 SLITRK6Q9H5Y7 841 aa5.44□□□□□ -1.54
PTEN-204ENST00000487939 FOXJ2Q9P0K8 574 aa5.44□□□□□ -1.54
PTEN-204ENST00000487939 SERTAD3Q9UJW9 196 aa5.44□□□□□ -1.54
PTEN-204ENST00000487939 NDRG4Q9ULP0 352 aaKnown RBP5.44□□□□□ -1.54
PTEN-204ENST00000487939 WDR27A2RRH5 827 aa5.43□□□□□ -1.54
PTEN-204ENST00000487939 ADM5C9JUS6 153 aa5.43□□□□□ -1.54
PTEN-204ENST00000487939 PYCARD-AS1I3L0S3 204 aa5.43□□□□□ -1.54
PTEN-204ENST00000487939 SLC16A3O15427 465 aaKnown RBP5.43□□□□□ -1.54
PTEN-204ENST00000487939 URI1O94763 535 aaPredicted RBP5.43□□□□□ -1.54
PTEN-204ENST00000487939 KRT18P05783 430 aaKnown RBP5.43□□□□□ -1.54
PTEN-204ENST00000487939 RHOP08100 348 aa5.43□□□□□ -1.54
PTEN-204ENST00000487939 TRIM27P14373 513 aa5.43□□□□□ -1.54
PTEN-204ENST00000487939 PLA2G5P39877 138 aa5.43□□□□□ -1.54
PTEN-204ENST00000487939 RARRES1P49788 294 aa5.43□□□□□ -1.54
PTEN-204ENST00000487939 PDE6CP51160 858 aa5.43□□□□□ -1.54
PTEN-204ENST00000487939 MAPK10P53779 464 aa5.43□□□□□ -1.54
PTEN-204ENST00000487939 SIM1P81133 766 aaPredicted RBP5.43□□□□□ -1.54
PTEN-204ENST00000487939 MYO1EQ12965 1108 aa5.43□□□□□ -1.54
PTEN-204ENST00000487939 BMPR2Q13873 1038 aa5.43□□□□□ -1.54
PTEN-204ENST00000487939 SAFBQ15424 915 aaKnown RBP eCLIP5.43□□□□□ -1.54
PTEN-204ENST00000487939 TBCCQ15814 346 aa5.43□□□□□ -1.54
PTEN-204ENST00000487939 COBLL1Q53SF7 1204 aa5.43□□□□□ -1.54
PTEN-204ENST00000487939 C3orf38Q5JPI3 329 aa5.43□□□□□ -1.54
PTEN-204ENST00000487939 GRASPQ7Z6J2 395 aaPredicted RBP5.43□□□□□ -1.54
PTEN-204ENST00000487939 PEG10Q86TG7 708 aaKnown RBP5.43□□□□□ -1.54
PTEN-204ENST00000487939 OR56A3Q8NH54 315 aa5.43□□□□□ -1.54
PTEN-204ENST00000487939 RAPGEF4Q8WZA2 1011 aa5.43□□□□□ -1.54
PTEN-204ENST00000487939 STRBPQ96SI9 672 aaKnown RBP5.43□□□□□ -1.54
PTEN-204ENST00000487939 UNKQ9C0B0 810 aaKnown RBP5.43□□□□□ -1.54
PTEN-204ENST00000487939 XPNPEP3Q9NQH7 507 aa5.43□□□□□ -1.54
PTEN-204ENST00000487939 RGS17Q9UGC6 210 aaPredicted RBP5.43□□□□□ -1.54
PTEN-204ENST00000487939 ZNHIT2Q9UHR6 403 aa5.43□□□□□ -1.54
PTEN-204ENST00000487939 TLK1Q9UKI8 766 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms