RNA–Protein interactions for RNA: ENST00000487894.5

HMG20B-212, Transcript of high mobility group 20B, humanhuman

TSL 2

Gene HMG20B, Length 1,242 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-212ENST00000487894 GTF2H1P32780 548 aa18.2■□□□□ 0.5
HMG20B-212ENST00000487894 ASPAP45381 313 aa18.2■□□□□ 0.5
HMG20B-212ENST00000487894 MXI1P50539 228 aa18.2■□□□□ 0.5
HMG20B-212ENST00000487894 TEAD2Q15562 447 aa18.2■□□□□ 0.5
HMG20B-212ENST00000487894 KRT39Q6A163 491 aa18.2■□□□□ 0.5
HMG20B-212ENST00000487894 FOXR2Q6PJQ5 311 aa18.2■□□□□ 0.5
HMG20B-212ENST00000487894 C4orf50Q6ZRC1 276 aa18.2■□□□□ 0.5
HMG20B-212ENST00000487894 GAREM2Q75VX8 874 aa18.2■□□□□ 0.5
HMG20B-212ENST00000487894 STKLD1Q8NE28 680 aa18.2■□□□□ 0.5
HMG20B-212ENST00000487894 GPR152Q8TDT2 470 aa18.2■□□□□ 0.5
HMG20B-212ENST00000487894 A8MXQ7 604 aa18.19■□□□□ 0.5
HMG20B-212ENST00000487894 LRRN2O75325 713 aa18.19■□□□□ 0.5
HMG20B-212ENST00000487894 P4HA1P13674 534 aa18.19■□□□□ 0.5
HMG20B-212ENST00000487894 GABRR2P28476 465 aa18.19■□□□□ 0.5
HMG20B-212ENST00000487894 MAGEA11P43364 429 aa18.19■□□□□ 0.5
HMG20B-212ENST00000487894 NOP14P78316 857 aaKnown RBP18.19■□□□□ 0.5
HMG20B-212ENST00000487894 MAPRE1Q15691 268 aaKnown RBP18.19■□□□□ 0.5
HMG20B-212ENST00000487894 DDR2Q16832 855 aa18.19■□□□□ 0.5
HMG20B-212ENST00000487894 DCAF17Q5H9S7 520 aaPredicted RBP18.19■□□□□ 0.5
HMG20B-212ENST00000487894 MDH1BQ5I0G3 518 aa18.19■□□□□ 0.5
HMG20B-212ENST00000487894 SDHAF4Q5VUM1 108 aa18.19■□□□□ 0.5
HMG20B-212ENST00000487894 BMP8AQ7Z5Y6 402 aa18.19■□□□□ 0.5
HMG20B-212ENST00000487894 MYCBPAPQ8TBZ2 947 aa18.19■□□□□ 0.5
HMG20B-212ENST00000487894 PCED1BQ96HM7 432 aa18.19■□□□□ 0.5
HMG20B-212ENST00000487894 ZSWIM3Q96MP5 696 aa18.19■□□□□ 0.5
HMG20B-212ENST00000487894 CEP63Q96MT8 703 aa18.19■□□□□ 0.5
HMG20B-212ENST00000487894 KXD1Q9BQD3 176 aa18.19■□□□□ 0.5
HMG20B-212ENST00000487894 IL21Q9HBE4 155 aa18.19■□□□□ 0.5
HMG20B-212ENST00000487894 APOBEC3GQ9HC16 384 aaKnown RBP18.19■□□□□ 0.5
HMG20B-212ENST00000487894 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.19■□□□□ 0.51e-6■■■■■ 77.4
HMG20B-212ENST00000487894 COL4A3Q01955 1670 aa18.18■□□□□ 0.5
HMG20B-212ENST00000487894 ZDBF2Q9HCK1 2354 aa18.18■□□□□ 0.5
HMG20B-212ENST00000487894 MIA3Q5JRA6 1907 aa18.18■□□□□ 0.5
HMG20B-212ENST00000487894 STX10O60499 249 aa18.18■□□□□ 0.5
HMG20B-212ENST00000487894 FGF19O95750 216 aa18.18■□□□□ 0.5
HMG20B-212ENST00000487894 PDGFBP01127 241 aaPredicted RBP18.18■□□□□ 0.5
HMG20B-212ENST00000487894 SRFP11831 508 aa18.18■□□□□ 0.5
HMG20B-212ENST00000487894 HMGA1P17096 107 aaKnown RBP18.18■□□□□ 0.5
HMG20B-212ENST00000487894 PTPN1P18031 435 aaKnown RBP18.18■□□□□ 0.5
HMG20B-212ENST00000487894 COL9A1P20849 921 aa18.18■□□□□ 0.5
HMG20B-212ENST00000487894 RPL10AP62906 217 aaKnown RBP18.18■□□□□ 0.5
HMG20B-212ENST00000487894 CYP27A1Q02318 531 aa18.18■□□□□ 0.5
HMG20B-212ENST00000487894 PAK1Q13153 545 aa18.18■□□□□ 0.5
HMG20B-212ENST00000487894 CBWD6Q4V339 395 aa18.18■□□□□ 0.5
HMG20B-212ENST00000487894 CBWD3Q5JTY5 395 aa18.18■□□□□ 0.5
HMG20B-212ENST00000487894 FAM78AQ5JUQ0 283 aa18.18■□□□□ 0.5
HMG20B-212ENST00000487894 CBWD5Q5RIA9 395 aa18.18■□□□□ 0.5
HMG20B-212ENST00000487894 STXBP5Q5T5C0 1151 aa18.18■□□□□ 0.5
HMG20B-212ENST00000487894 TCERG1LQ5VWI1 586 aa18.18■□□□□ 0.5
HMG20B-212ENST00000487894 B3GALNT2Q8NCR0 500 aa18.18■□□□□ 0.5
HMG20B-212ENST00000487894 SEMA4DQ92854 862 aa18.18■□□□□ 0.5
HMG20B-212ENST00000487894 SLC35C1Q96A29 364 aa18.18■□□□□ 0.5
HMG20B-212ENST00000487894 ASB16Q96NS5 453 aa18.18■□□□□ 0.5
HMG20B-212ENST00000487894 GBP4Q96PP9 640 aa18.18■□□□□ 0.5
HMG20B-212ENST00000487894 BCO2Q9BYV7 579 aa18.18■□□□□ 0.5
HMG20B-212ENST00000487894 IMPG2Q9BZV3 1241 aa18.18■□□□□ 0.5
HMG20B-212ENST00000487894 MAGEC2Q9UBF1 373 aaPredicted RBP18.18■□□□□ 0.5
HMG20B-212ENST00000487894 HMGXB4Q9UGU5 601 aa18.18■□□□□ 0.5
HMG20B-212ENST00000487894 ARMCX3Q9UH62 379 aaPredicted RBP18.18■□□□□ 0.5
HMG20B-212ENST00000487894 BICDL2A1A5D9 508 aa18.17■□□□□ 0.5
HMG20B-212ENST00000487894 ECI2O75521 394 aa18.17■□□□□ 0.5
HMG20B-212ENST00000487894 NOL4O94818 638 aa18.17■□□□□ 0.5
HMG20B-212ENST00000487894 CSH1P0DML2 217 aa18.17■□□□□ 0.5
HMG20B-212ENST00000487894 CSH2P0DML3 217 aa18.17■□□□□ 0.5
HMG20B-212ENST00000487894 BDNFP23560 247 aa18.17■□□□□ 0.5
HMG20B-212ENST00000487894 STX17P56962 302 aa18.17■□□□□ 0.5
HMG20B-212ENST00000487894 TANGO2Q6ICL3 276 aa18.17■□□□□ 0.5
HMG20B-212ENST00000487894 VSTM1Q6UX27 236 aa18.17■□□□□ 0.5
HMG20B-212ENST00000487894 FILIP1Q7Z7B0 1213 aa18.17■□□□□ 0.5
HMG20B-212ENST00000487894 SCN4BQ8IWT1 228 aa18.17■□□□□ 0.5
HMG20B-212ENST00000487894 FBXL13Q8NEE6 735 aa18.17■□□□□ 0.5
HMG20B-212ENST00000487894 PBXIP1Q96AQ6 731 aa18.17■□□□□ 0.5
HMG20B-212ENST00000487894 PLA2G2FQ9BZM2 168 aa18.17■□□□□ 0.5
HMG20B-212ENST00000487894 NIF3L1Q9GZT8 377 aa18.17■□□□□ 0.5
HMG20B-212ENST00000487894 NCANO14594 1321 aa18.17■□□□□ 0.5
HMG20B-212ENST00000487894 WDFY4Q6ZS81 3184 aa18.17■□□□□ 0.5
HMG20B-212ENST00000487894 SLC38A8A6NNN8 435 aa18.16■□□□□ 0.5
HMG20B-212ENST00000487894 CFHP08603 1231 aa18.16■□□□□ 0.5
HMG20B-212ENST00000487894 CDC25CP30307 473 aa18.16■□□□□ 0.5
HMG20B-212ENST00000487894 CYP4F8P98187 520 aa18.16■□□□□ 0.5
HMG20B-212ENST00000487894 INCA1Q0VD86 236 aa18.16■□□□□ 0.5
HMG20B-212ENST00000487894 TAF12Q16514 161 aa18.16■□□□□ 0.5
HMG20B-212ENST00000487894 FRMD5Q7Z6J6 570 aa18.16■□□□□ 0.5
HMG20B-212ENST00000487894 TMEM150AQ86TG1 271 aa18.16■□□□□ 0.5
HMG20B-212ENST00000487894 ZSCAN18Q8TBC5 510 aaPredicted RBP18.16■□□□□ 0.5
HMG20B-212ENST00000487894 SMARCD2Q92925 531 aa18.16■□□□□ 0.5
HMG20B-212ENST00000487894 ELSPBP1Q96BH3 223 aa18.16■□□□□ 0.5
HMG20B-212ENST00000487894 TRMT2BQ96GJ1 504 aaKnown RBP18.16■□□□□ 0.5
HMG20B-212ENST00000487894 B3GNT5Q9BYG0 378 aa18.16■□□□□ 0.5
HMG20B-212ENST00000487894 GPR88Q9GZN0 384 aa18.16■□□□□ 0.5
HMG20B-212ENST00000487894 NUP62CLQ9H1M0 184 aa18.16■□□□□ 0.5
HMG20B-212ENST00000487894 ATXN3LQ9H3M9 355 aa18.16■□□□□ 0.5
HMG20B-212ENST00000487894 SLITRK6Q9H5Y7 841 aa18.16■□□□□ 0.5
HMG20B-212ENST00000487894 METTL14Q9HCE5 456 aaKnown RBP18.16■□□□□ 0.5
HMG20B-212ENST00000487894 SLC2A4RGQ9NR83 387 aa18.16■□□□□ 0.5
HMG20B-212ENST00000487894 TMEM30AQ9NV96 361 aa18.16■□□□□ 0.5
HMG20B-212ENST00000487894 TADA3O75528 432 aa18.15■□□□□ 0.5
HMG20B-212ENST00000487894 F11P03951 625 aa18.15■□□□□ 0.5
HMG20B-212ENST00000487894 NDST1P52848 882 aa18.15■□□□□ 0.5
HMG20B-212ENST00000487894 CACNA2D1P54289 1103 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms