RNA–Protein interactions for RNA: ENST00000487496.1

SPEN-205, Transcript of spen family transcriptional repressor, humanhuman

TSL 1 (best)

Gene SPEN, Length 543 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-205ENST00000487496 NXF1Q9UBU9 619 aaKnown RBP12.25□□□□□ -0.45
SPEN-205ENST00000487496 FRMD4BQ9Y2L6 1034 aa12.25□□□□□ -0.45
SPEN-205ENST00000487496 NME7Q9Y5B8 376 aa12.25□□□□□ -0.45
SPEN-205ENST00000487496 SHISA7A6NL88 538 aa12.24□□□□□ -0.45
SPEN-205ENST00000487496 ZNF263O14978 683 aa12.24□□□□□ -0.45
SPEN-205ENST00000487496 LRRN2O75325 713 aa12.24□□□□□ -0.45
SPEN-205ENST00000487496 NOL4O94818 638 aa12.24□□□□□ -0.45
SPEN-205ENST00000487496 VNN1O95497 513 aa12.24□□□□□ -0.45
SPEN-205ENST00000487496 CSH1P0DML2 217 aa12.24□□□□□ -0.45
SPEN-205ENST00000487496 CSH2P0DML3 217 aa12.24□□□□□ -0.45
SPEN-205ENST00000487496 GLULP15104 373 aa12.24□□□□□ -0.45
SPEN-205ENST00000487496 NR2F2P24468 414 aa12.24□□□□□ -0.45
SPEN-205ENST00000487496 WEE1P30291 646 aa12.24□□□□□ -0.45
SPEN-205ENST00000487496 MRE11P49959 708 aa12.24□□□□□ -0.45
SPEN-205ENST00000487496 NLRP12P59046 1061 aa12.24□□□□□ -0.45
SPEN-205ENST00000487496 COL4A3Q01955 1670 aa12.24□□□□□ -0.45
SPEN-205ENST00000487496 FCHO2Q0JRZ9 810 aa12.24□□□□□ -0.45
SPEN-205ENST00000487496 PNOCQ13519 176 aa12.24□□□□□ -0.45
SPEN-205ENST00000487496 NCOA4Q13772 614 aa12.24□□□□□ -0.45
SPEN-205ENST00000487496 MAPRE1Q15691 268 aaKnown RBP12.24□□□□□ -0.45
SPEN-205ENST00000487496 NFIL3Q16649 462 aa12.24□□□□□ -0.45
SPEN-205ENST00000487496 TPRG1Q6ZUI0 275 aa12.24□□□□□ -0.45
SPEN-205ENST00000487496 SCN4BQ8IWT1 228 aa12.24□□□□□ -0.45
SPEN-205ENST00000487496 STKLD1Q8NE28 680 aa12.24□□□□□ -0.45
SPEN-205ENST00000487496 OR6B3Q8NGW1 331 aa12.24□□□□□ -0.45
SPEN-205ENST00000487496 MYCBPAPQ8TBZ2 947 aa12.24□□□□□ -0.45
SPEN-205ENST00000487496 TMC2Q8TDI7 906 aa12.24□□□□□ -0.45
SPEN-205ENST00000487496 MYLPFQ96A32 169 aa12.24□□□□□ -0.45
SPEN-205ENST00000487496 PCED1BQ96HM7 432 aa12.24□□□□□ -0.45
SPEN-205ENST00000487496 MYRFLQ96LU7 910 aa12.24□□□□□ -0.45
SPEN-205ENST00000487496 LRRC3BQ96PB8 259 aa12.24□□□□□ -0.45
SPEN-205ENST00000487496 SLC46A2Q9BY10 475 aa12.24□□□□□ -0.45
SPEN-205ENST00000487496 TRPV5Q9NQA5 729 aa12.24□□□□□ -0.45
SPEN-205ENST00000487496 MAGEC2Q9UBF1 373 aaPredicted RBP12.24□□□□□ -0.45
SPEN-205ENST00000487496 MAGED2Q9UNF1 606 aaPredicted RBP12.24□□□□□ -0.45
SPEN-205ENST00000487496 MTF2Q9Y483 593 aaPredicted RBP12.24□□□□□ -0.45
SPEN-205ENST00000487496 PIEZO1Q92508 2521 aa12.24□□□□□ -0.45
SPEN-205ENST00000487496 WDFY4Q6ZS81 3184 aa12.23□□□□□ -0.45
SPEN-205ENST00000487496 FAM170BA6NMN3 283 aa12.23□□□□□ -0.45
SPEN-205ENST00000487496 SLC38A8A6NNN8 435 aa12.23□□□□□ -0.45
SPEN-205ENST00000487496 ARNTLO00327 626 aa12.23□□□□□ -0.45
SPEN-205ENST00000487496 IKBKBO14920 756 aa12.23□□□□□ -0.45
SPEN-205ENST00000487496 MAPK13O15264 365 aa12.23□□□□□ -0.45
SPEN-205ENST00000487496 AKAP3O75969 853 aa12.23□□□□□ -0.45
SPEN-205ENST00000487496 PRAMEF12O95522 483 aa12.23□□□□□ -0.45
SPEN-205ENST00000487496 RPL13P26373 211 aaKnown RBP12.23□□□□□ -0.45
SPEN-205ENST00000487496 MAGEA11P43364 429 aa12.23□□□□□ -0.45
SPEN-205ENST00000487496 CYP27A1Q02318 531 aa12.23□□□□□ -0.45
SPEN-205ENST00000487496 FAM160A1Q05DH4 1040 aa12.23□□□□□ -0.45
SPEN-205ENST00000487496 UBXN2BQ14CS0 331 aa12.23□□□□□ -0.45
SPEN-205ENST00000487496 ANGPT1Q15389 498 aa12.23□□□□□ -0.45
SPEN-205ENST00000487496 ZNF699Q32M78 642 aa12.23□□□□□ -0.45
SPEN-205ENST00000487496 ZACNQ401N2 412 aa12.23□□□□□ -0.45
SPEN-205ENST00000487496 ZCWPW2Q504Y3 356 aa12.23□□□□□ -0.45
SPEN-205ENST00000487496 ZNF667Q5HYK9 610 aa12.23□□□□□ -0.45
SPEN-205ENST00000487496 C1orf220Q5T0J3 134 aa12.23□□□□□ -0.45
SPEN-205ENST00000487496 VSTM1Q6UX27 236 aa12.23□□□□□ -0.45
SPEN-205ENST00000487496 ZNF852Q6ZMS4 543 aa12.23□□□□□ -0.45
SPEN-205ENST00000487496 SV2AQ7L0J3 742 aa12.23□□□□□ -0.45
SPEN-205ENST00000487496 YAF2Q8IY57 180 aa12.23□□□□□ -0.45
SPEN-205ENST00000487496 SMYD4Q8IYR2 804 aaPredicted RBP12.23□□□□□ -0.45
SPEN-205ENST00000487496 ELMO3Q96BJ8 720 aa12.23□□□□□ -0.45
SPEN-205ENST00000487496 TRMT2BQ96GJ1 504 aaKnown RBP12.23□□□□□ -0.45
SPEN-205ENST00000487496 NELL2Q99435 816 aa12.23□□□□□ -0.45
SPEN-205ENST00000487496 OSBPL6Q9BZF3 934 aa12.23□□□□□ -0.45
SPEN-205ENST00000487496 LTB4R2Q9NPC1 389 aa12.23□□□□□ -0.45
SPEN-205ENST00000487496 OBP2AQ9NY56 170 aa12.23□□□□□ -0.45
SPEN-205ENST00000487496 ZMYM5Q9UJ78 669 aa12.23□□□□□ -0.45
SPEN-205ENST00000487496 SOBPA7XYQ1 873 aa12.22□□□□□ -0.45
SPEN-205ENST00000487496 A8MXQ7 604 aa12.22□□□□□ -0.45
SPEN-205ENST00000487496 DPYSL4O14531 572 aa12.22□□□□□ -0.45
SPEN-205ENST00000487496 CHADO15335 359 aa12.22□□□□□ -0.45
SPEN-205ENST00000487496 PTPN1P18031 435 aaKnown RBP12.22□□□□□ -0.45
SPEN-205ENST00000487496 BDNFP23560 247 aa12.22□□□□□ -0.45
SPEN-205ENST00000487496 DDX6P26196 483 aaKnown RBP eCLIP12.22□□□□□ -0.45
SPEN-205ENST00000487496 TARSP26639 723 aaKnown RBP12.22□□□□□ -0.45
SPEN-205ENST00000487496 GRIK1P39086 918 aa12.22□□□□□ -0.45
SPEN-205ENST00000487496 VAMP7P51809 220 aa12.22□□□□□ -0.45
SPEN-205ENST00000487496 CDH8P55286 799 aa12.22□□□□□ -0.45
SPEN-205ENST00000487496 ADAM9Q13443 819 aa12.22□□□□□ -0.45
SPEN-205ENST00000487496 SGSM1Q2NKQ1 1148 aa12.22□□□□□ -0.45
SPEN-205ENST00000487496 MDH1BQ5I0G3 518 aa12.22□□□□□ -0.45
SPEN-205ENST00000487496 TXNDC8Q6A555 127 aa12.22□□□□□ -0.45
SPEN-205ENST00000487496 INTS8Q75QN2 995 aaKnown RBP12.22□□□□□ -0.45
SPEN-205ENST00000487496 MON1AQ86VX9 555 aa12.22□□□□□ -0.45
SPEN-205ENST00000487496 CMTM8Q8IZV2 173 aa12.22□□□□□ -0.45
SPEN-205ENST00000487496 MAB21L3Q8N8X9 362 aa12.22□□□□□ -0.45
SPEN-205ENST00000487496 BPIFB1Q8TDL5 484 aa12.22□□□□□ -0.45
SPEN-205ENST00000487496 MRPS31Q92665 395 aaKnown RBP12.22□□□□□ -0.45
SPEN-205ENST00000487496 SPATA17Q96L03 361 aa12.22□□□□□ -0.45
SPEN-205ENST00000487496 TIGD1Q96MW7 591 aa12.22□□□□□ -0.45
SPEN-205ENST00000487496 SMG9Q9H0W8 520 aaKnown RBP12.22□□□□□ -0.45
SPEN-205ENST00000487496 DPEP3Q9H4B8 488 aa12.22□□□□□ -0.45
SPEN-205ENST00000487496 SMYD3Q9H7B4 428 aa12.22□□□□□ -0.45
SPEN-205ENST00000487496 RMND1Q9NWS8 449 aa12.22□□□□□ -0.45
SPEN-205ENST00000487496 UXTQ9UBK9 157 aaPredicted RBP12.22□□□□□ -0.45
SPEN-205ENST00000487496 MAN2B1O00754 1011 aa12.21□□□□□ -0.45
SPEN-205ENST00000487496 TADA3O75528 432 aa12.21□□□□□ -0.45
SPEN-205ENST00000487496 CLSTN1O94985 981 aa12.21□□□□□ -0.45
SPEN-205ENST00000487496 KRT13P13646 458 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 444.2 ms