RNA–Protein interactions for RNA: ENST00000486901.1

HSPG2-211, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 3,586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-211ENST00000486901 DNAH12Q6ZR08 3092 aa12.99□□□□□ -0.33
HSPG2-211ENST00000486901 TTLL13PA6NNM8 815 aa12.99□□□□□ -0.33
HSPG2-211ENST00000486901 OPHN1O60890 802 aa12.99□□□□□ -0.33
HSPG2-211ENST00000486901 MSX2P35548 267 aaPredicted RBP12.99□□□□□ -0.33
HSPG2-211ENST00000486901 RANBP1P43487 201 aa12.99□□□□□ -0.33
HSPG2-211ENST00000486901 RPS6P62753 249 aaKnown RBP12.99□□□□□ -0.33
HSPG2-211ENST00000486901 NOMO3P69849 1222 aa12.99□□□□□ -0.33
HSPG2-211ENST00000486901 MRPS35P82673 323 aaKnown RBP12.99□□□□□ -0.33
HSPG2-211ENST00000486901 CAV1Q03135 178 aa12.99□□□□□ -0.33
HSPG2-211ENST00000486901 USP4Q13107 963 aa12.99□□□□□ -0.33
HSPG2-211ENST00000486901 PPP6R3Q5H9R7 873 aaPredicted RBP12.99□□□□□ -0.33
HSPG2-211ENST00000486901 C1orf228Q6PIY5 440 aa12.99□□□□□ -0.33
HSPG2-211ENST00000486901 FEZF2Q8TBJ5 459 aa12.99□□□□□ -0.33
HSPG2-211ENST00000486901 MASTLQ96GX5 879 aa12.99□□□□□ -0.33
HSPG2-211ENST00000486901 PGLYRP2Q96PD5 576 aa12.99□□□□□ -0.33
HSPG2-211ENST00000486901 PPP1R16BQ96T49 567 aa12.99□□□□□ -0.33
HSPG2-211ENST00000486901 TJP3O95049 919 aa12.98□□□□□ -0.33
HSPG2-211ENST00000486901 CALRP27797 417 aaKnown RBP12.98□□□□□ -0.33
HSPG2-211ENST00000486901 RAP1GAPP47736 663 aa12.98□□□□□ -0.33
HSPG2-211ENST00000486901 SLC25A3Q00325 362 aa12.98□□□□□ -0.33
HSPG2-211ENST00000486901 RNASEH2BQ5TBB1 312 aaKnown RBP12.98□□□□□ -0.33
HSPG2-211ENST00000486901 C1orf146Q5VVC0 180 aa12.98□□□□□ -0.33
HSPG2-211ENST00000486901 LPCAT4Q643R3 524 aa12.98□□□□□ -0.33
HSPG2-211ENST00000486901 POLNQ7Z5Q5 900 aa12.98□□□□□ -0.33
HSPG2-211ENST00000486901 RFX6Q8HWS3 928 aa12.98□□□□□ -0.33
HSPG2-211ENST00000486901 GPD1LQ8N335 351 aa12.98□□□□□ -0.33
HSPG2-211ENST00000486901 CPT1BQ92523 772 aa12.98□□□□□ -0.33
HSPG2-211ENST00000486901 TUBGCP5Q96RT8 1024 aa12.98□□□□□ -0.33
HSPG2-211ENST00000486901 EBF4Q9BQW3 602 aa12.98□□□□□ -0.33
HSPG2-211ENST00000486901 IL1RAPL1Q9NZN1 696 aa12.98□□□□□ -0.33
HSPG2-211ENST00000486901 TAF1LQ8IZX4 1826 aa12.98□□□□□ -0.33
HSPG2-211ENST00000486901 DCAF8L1A6NGE4 600 aa12.98□□□□□ -0.33
HSPG2-211ENST00000486901 KBTBD13C9JR72 458 aa12.98□□□□□ -0.33
HSPG2-211ENST00000486901 POLRMTO00411 1230 aaKnown RBP12.98□□□□□ -0.33
HSPG2-211ENST00000486901 MAP3K7O43318 606 aa12.98□□□□□ -0.33
HSPG2-211ENST00000486901 ZNF862O60290 1169 aa12.98□□□□□ -0.33
HSPG2-211ENST00000486901 PYGLP06737 847 aa12.98□□□□□ -0.33
HSPG2-211ENST00000486901 SKIP12755 728 aa12.98□□□□□ -0.33
HSPG2-211ENST00000486901 RPL22P35268 128 aaKnown RBP12.98□□□□□ -0.33
HSPG2-211ENST00000486901 SH3PXD2AQ5TCZ1 1133 aa12.98□□□□□ -0.33
HSPG2-211ENST00000486901 ALLCQ8N6M5 410 aa12.98□□□□□ -0.33
HSPG2-211ENST00000486901 RBM15BQ8NDT2 890 aaKnown RBP12.98□□□□□ -0.33
HSPG2-211ENST00000486901 GMCL1P1Q8NEA9 526 aa12.98□□□□□ -0.33
HSPG2-211ENST00000486901 GSTCDQ8NEC7 633 aa12.98□□□□□ -0.33
HSPG2-211ENST00000486901 JOSD2Q8TAC2 188 aa12.98□□□□□ -0.33
HSPG2-211ENST00000486901 SH3TC2Q8TF17 1288 aa12.98□□□□□ -0.33
HSPG2-211ENST00000486901 MAIP1Q8WWC4 291 aa12.98□□□□□ -0.33
HSPG2-211ENST00000486901 INPP5DQ92835 1189 aa12.98□□□□□ -0.33
HSPG2-211ENST00000486901 WNK4Q96J92 1243 aa12.98□□□□□ -0.33
HSPG2-211ENST00000486901 GJD4Q96KN9 370 aaPredicted RBP12.98□□□□□ -0.33
HSPG2-211ENST00000486901 RMDN3Q96TC7 470 aa12.98□□□□□ -0.33
HSPG2-211ENST00000486901 AGO4Q9HCK5 861 aaKnown RBP12.98□□□□□ -0.33
HSPG2-211ENST00000486901 KRT82Q9NSB4 513 aa12.98□□□□□ -0.33
HSPG2-211ENST00000486901 TMOD2Q9NZR1 351 aa12.98□□□□□ -0.33
HSPG2-211ENST00000486901 SMG5Q9UPR3 1016 aaKnown RBP12.98□□□□□ -0.33
HSPG2-211ENST00000486901 SBF2Q86WG5 1849 aa12.98□□□□□ -0.33
HSPG2-211ENST00000486901 ITGBL1O95965 494 aaPredicted RBP12.97□□□□□ -0.33
HSPG2-211ENST00000486901 IL1R2P27930 398 aa12.97□□□□□ -0.33
HSPG2-211ENST00000486901 MAN1A1P33908 653 aa12.97□□□□□ -0.33
HSPG2-211ENST00000486901 RFC1P35251 1148 aaPredicted RBP12.97□□□□□ -0.33
HSPG2-211ENST00000486901 TNFSF9P41273 254 aa12.97□□□□□ -0.33
HSPG2-211ENST00000486901 SKIV2L2P42285 1042 aaKnown RBP12.97□□□□□ -0.33
HSPG2-211ENST00000486901 CENPCQ03188 943 aa12.97□□□□□ -0.33
HSPG2-211ENST00000486901 C16orf46Q6P387 395 aa12.97□□□□□ -0.33
HSPG2-211ENST00000486901 TEX9Q8N6V9 391 aa12.97□□□□□ -0.33
HSPG2-211ENST00000486901 ZNF606Q8WXB4 792 aa12.97□□□□□ -0.33
HSPG2-211ENST00000486901 MOCOSQ96EN8 888 aa12.97□□□□□ -0.33
HSPG2-211ENST00000486901 SENP7Q9BQF6 1050 aa12.97□□□□□ -0.33
HSPG2-211ENST00000486901 APOL6Q9BWW8 343 aa12.97□□□□□ -0.33
HSPG2-211ENST00000486901 VCXQ9H320 206 aa12.97□□□□□ -0.33
HSPG2-211ENST00000486901 PPM1HQ9ULR3 514 aa12.97□□□□□ -0.33
HSPG2-211ENST00000486901 HEY1Q9Y5J3 304 aa12.97□□□□□ -0.33
HSPG2-211ENST00000486901 MAD1L1Q9Y6D9 718 aa12.97□□□□□ -0.33
HSPG2-211ENST00000486901 TRIM49D1C9J1S8 452 aa12.97□□□□□ -0.33
HSPG2-211ENST00000486901 C2CD2LO14523 706 aa12.97□□□□□ -0.33
HSPG2-211ENST00000486901 LYPLA1O75608 230 aaPredicted RBP12.97□□□□□ -0.33
HSPG2-211ENST00000486901 VNN1O95497 513 aa12.97□□□□□ -0.33
HSPG2-211ENST00000486901 INHBAP08476 426 aa12.97□□□□□ -0.33
HSPG2-211ENST00000486901 PSMA2P25787 234 aa12.97□□□□□ -0.33
HSPG2-211ENST00000486901 SLC34A1Q06495 639 aa12.97□□□□□ -0.33
HSPG2-211ENST00000486901 NFIL3Q16649 462 aa12.97□□□□□ -0.33
HSPG2-211ENST00000486901 SLC45A4Q5BKX6 768 aa12.97□□□□□ -0.33
HSPG2-211ENST00000486901 MROH9Q5TGP6 573 aa12.97□□□□□ -0.33
HSPG2-211ENST00000486901 GPAT2Q6NUI2 795 aa12.97□□□□□ -0.33
HSPG2-211ENST00000486901 SLCO2A1Q92959 643 aa12.97□□□□□ -0.33
HSPG2-211ENST00000486901 SYNCQ9H7C4 482 aa12.97□□□□□ -0.33
HSPG2-211ENST00000486901 GPATCH2LQ9NWQ4 482 aa12.97□□□□□ -0.33
HSPG2-211ENST00000486901 NHSQ6T4R5 1651 aa12.97□□□□□ -0.33
HSPG2-211ENST00000486901 CCDC160A6NGH7 325 aa12.97□□□□□ -0.33
HSPG2-211ENST00000486901 ATP5HO75947 161 aa12.97□□□□□ -0.33
HSPG2-211ENST00000486901 KRT19P08727 400 aa12.97□□□□□ -0.33
HSPG2-211ENST00000486901 HACE1Q8IYU2 909 aa12.97□□□□□ -0.33
HSPG2-211ENST00000486901 UNC5BQ8IZJ1 945 aa12.97□□□□□ -0.33
HSPG2-211ENST00000486901 KCNK13Q9HB14 408 aa12.97□□□□□ -0.33
HSPG2-211ENST00000486901 PCMTD2Q9NV79 361 aa12.97□□□□□ -0.33
HSPG2-211ENST00000486901 RBAKQ9NYW8 714 aaPredicted RBP12.97□□□□□ -0.33
HSPG2-211ENST00000486901 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.96□□□□□ -0.33
HSPG2-211ENST00000486901 MYOCOSA0A1B0GUC4 107 aa12.96□□□□□ -0.33
HSPG2-211ENST00000486901 CXorf49A8MYA2 514 aaPredicted RBP12.96□□□□□ -0.33
HSPG2-211ENST00000486901 P4HA2O15460 535 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms