RNA–Protein interactions for RNA: ENST00000485842.5

HPS4-214, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-214ENST00000485842 TBXAS1P24557 533 aaPredicted RBP12.61□□□□□ -0.39
HPS4-214ENST00000485842 GBP2P32456 591 aaPredicted RBP12.61□□□□□ -0.39
HPS4-214ENST00000485842 SSTR3P32745 418 aaPredicted RBP12.61□□□□□ -0.39
HPS4-214ENST00000485842 YWHAEP62258 255 aaKnown RBP12.61□□□□□ -0.39
HPS4-214ENST00000485842 NCAPHQ15003 741 aa12.61□□□□□ -0.39
HPS4-214ENST00000485842 KRT31Q15323 416 aa12.61□□□□□ -0.39
HPS4-214ENST00000485842 DDR2Q16832 855 aa12.61□□□□□ -0.39
HPS4-214ENST00000485842 PABPC1LQ4VXU2 614 aaKnown RBP12.61□□□□□ -0.39
HPS4-214ENST00000485842 MIIPQ5JXC2 388 aa12.61□□□□□ -0.39
HPS4-214ENST00000485842 SDHAF4Q5VUM1 108 aa12.61□□□□□ -0.39
HPS4-214ENST00000485842 RRAGAQ7L523 313 aa12.61□□□□□ -0.39
HPS4-214ENST00000485842 ADHFE1Q8IWW8 467 aa12.61□□□□□ -0.39
HPS4-214ENST00000485842 STKLD1Q8NE28 680 aa12.61□□□□□ -0.39
HPS4-214ENST00000485842 GPR152Q8TDT2 470 aa12.61□□□□□ -0.39
HPS4-214ENST00000485842 GIPC2Q8TF65 315 aa12.61□□□□□ -0.39
HPS4-214ENST00000485842 KAT5Q92993 513 aa12.61□□□□□ -0.39
HPS4-214ENST00000485842 FUBP3Q96I24 572 aaKnown RBP eCLIP12.61□□□□□ -0.39
HPS4-214ENST00000485842 FAXDC2Q96IV6 333 aa12.61□□□□□ -0.39
HPS4-214ENST00000485842 BPIFA3Q9BQP9 254 aa12.61□□□□□ -0.39
HPS4-214ENST00000485842 NT5C1AQ9BXI3 368 aa12.61□□□□□ -0.39
HPS4-214ENST00000485842 B3GNT5Q9BYG0 378 aa12.61□□□□□ -0.39
HPS4-214ENST00000485842 ZNF518BQ9C0D4 1074 aa12.61□□□□□ -0.39
HPS4-214ENST00000485842 ELOVL4Q9GZR5 314 aa12.61□□□□□ -0.39
HPS4-214ENST00000485842 VPS16Q9H269 839 aa12.61□□□□□ -0.39
HPS4-214ENST00000485842 WDR6Q9NNW5 1121 aaKnown RBP12.61□□□□□ -0.39
HPS4-214ENST00000485842 ABCB6Q9NP58 842 aa12.61□□□□□ -0.39
HPS4-214ENST00000485842 ATP8B3O60423 1300 aa12.61□□□□□ -0.39
HPS4-214ENST00000485842 SMTNL1A8MU46 457 aa12.6□□□□□ -0.39
HPS4-214ENST00000485842 RHOP08100 348 aa12.6□□□□□ -0.39
HPS4-214ENST00000485842 MYL4P12829 197 aa12.6□□□□□ -0.39
HPS4-214ENST00000485842 PTPN2P17706 415 aa12.6□□□□□ -0.39
HPS4-214ENST00000485842 SLC9A1P19634 815 aa12.6□□□□□ -0.39
HPS4-214ENST00000485842 FSHRP23945 695 aa12.6□□□□□ -0.39
HPS4-214ENST00000485842 ADORA2BP29275 332 aa12.6□□□□□ -0.39
HPS4-214ENST00000485842 GRIK1P39086 918 aa12.6□□□□□ -0.39
HPS4-214ENST00000485842 COPB1P53618 953 aaKnown RBP12.6□□□□□ -0.39
HPS4-214ENST00000485842 RPL10AP62906 217 aaKnown RBP12.6□□□□□ -0.39
HPS4-214ENST00000485842 APBA1Q02410 837 aa12.6□□□□□ -0.39
HPS4-214ENST00000485842 ZP2Q05996 745 aa12.6□□□□□ -0.39
HPS4-214ENST00000485842 TAF12Q16514 161 aa12.6□□□□□ -0.39
HPS4-214ENST00000485842 EXOC3L4Q17RC7 722 aa12.6□□□□□ -0.39
HPS4-214ENST00000485842 CFAP221Q4G0U5 840 aa12.6□□□□□ -0.39
HPS4-214ENST00000485842 TRIM65Q6PJ69 517 aa12.6□□□□□ -0.39
HPS4-214ENST00000485842 FAM35AQ86V20 835 aa12.6□□□□□ -0.39
HPS4-214ENST00000485842 DHX40Q8IX18 779 aaKnown RBP12.6□□□□□ -0.39
HPS4-214ENST00000485842 HS6ST3Q8IZP7 471 aa12.6□□□□□ -0.39
HPS4-214ENST00000485842 TTC39CQ8N584 583 aa12.6□□□□□ -0.39
HPS4-214ENST00000485842 TDRD5Q8NAT2 981 aaKnown RBP12.6□□□□□ -0.39
HPS4-214ENST00000485842 WHAMMQ8TF30 809 aa12.6□□□□□ -0.39
HPS4-214ENST00000485842 ING5Q8WYH8 240 aa12.6□□□□□ -0.39
HPS4-214ENST00000485842 UHRF1Q96T88 793 aaPredicted RBP12.6□□□□□ -0.39
HPS4-214ENST00000485842 DNAI2Q9GZS0 605 aa12.6□□□□□ -0.39
HPS4-214ENST00000485842 ASAH2Q9NR71 780 aa12.6□□□□□ -0.39
HPS4-214ENST00000485842 PRKAG3Q9UGI9 489 aa12.6□□□□□ -0.39
HPS4-214ENST00000485842 PCDHB4Q9Y5E5 795 aa12.6□□□□□ -0.39
HPS4-214ENST00000485842 MYH10P35580 1976 aa12.6□□□□□ -0.39
HPS4-214ENST00000485842 NOTCH4Q99466 2003 aa12.59□□□□□ -0.39
HPS4-214ENST00000485842 GTPBP10A4D1E9 387 aaKnown RBP12.59□□□□□ -0.39
HPS4-214ENST00000485842 C2CD4DB7Z1M9 353 aa12.59□□□□□ -0.39
HPS4-214ENST00000485842 ANXA13P27216 316 aa12.59□□□□□ -0.39
HPS4-214ENST00000485842 MAGEA11P43364 429 aa12.59□□□□□ -0.39
HPS4-214ENST00000485842 GCNT1Q02742 428 aa12.59□□□□□ -0.39
HPS4-214ENST00000485842 SLC5A9Q2M3M2 681 aa12.59□□□□□ -0.39
HPS4-214ENST00000485842 CYP4A22Q5TCH4 519 aa12.59□□□□□ -0.39
HPS4-214ENST00000485842 PHLDB3Q6NSJ2 640 aa12.59□□□□□ -0.39
HPS4-214ENST00000485842 GJB7Q6PEY0 223 aa12.59□□□□□ -0.39
HPS4-214ENST00000485842 TMEM270Q6UE05 265 aa12.59□□□□□ -0.39
HPS4-214ENST00000485842 VSTM1Q6UX27 236 aa12.59□□□□□ -0.39
HPS4-214ENST00000485842 PDZD4Q76G19 769 aaPredicted RBP12.59□□□□□ -0.39
HPS4-214ENST00000485842 ITIH5Q86UX2 942 aa12.59□□□□□ -0.39
HPS4-214ENST00000485842 CRYBG2Q8N1P7 616 aa12.59□□□□□ -0.39
HPS4-214ENST00000485842 UBR7Q8N806 425 aa12.59□□□□□ -0.39
HPS4-214ENST00000485842 C12orf29Q8N999 325 aa12.59□□□□□ -0.39
HPS4-214ENST00000485842 ITFG1Q8TB96 612 aa12.59□□□□□ -0.39
HPS4-214ENST00000485842 SLC2A14Q8TDB8 520 aa12.59□□□□□ -0.39
HPS4-214ENST00000485842 PSMG2Q969U7 264 aa12.59□□□□□ -0.39
HPS4-214ENST00000485842 HSD3B7Q9H2F3 369 aa12.59□□□□□ -0.39
HPS4-214ENST00000485842 CBX8Q9HC52 389 aa12.59□□□□□ -0.39
HPS4-214ENST00000485842 KRT82Q9NSB4 513 aa12.59□□□□□ -0.39
HPS4-214ENST00000485842 MAGED2Q9UNF1 606 aaPredicted RBP12.59□□□□□ -0.39
HPS4-214ENST00000485842 MRPS23Q9Y3D9 190 aaKnown RBP12.59□□□□□ -0.39
HPS4-214ENST00000485842 NR2E1Q9Y466 385 aa12.59□□□□□ -0.39
HPS4-214ENST00000485842 ASB3Q9Y575 518 aa12.59□□□□□ -0.39
HPS4-214ENST00000485842 F8VP50 259 aa12.58□□□□□ -0.4
HPS4-214ENST00000485842 TRIM66O15016 1216 aa12.58□□□□□ -0.4
HPS4-214ENST00000485842 AP1G2O75843 785 aa12.58□□□□□ -0.4
HPS4-214ENST00000485842 ATP1A3P13637 1013 aa12.58□□□□□ -0.4
HPS4-214ENST00000485842 CD19P15391 556 aa12.58□□□□□ -0.4
HPS4-214ENST00000485842 ZNF18P17022 549 aa12.58□□□□□ -0.4
HPS4-214ENST00000485842 GJA1P17302 382 aa12.58□□□□□ -0.4
HPS4-214ENST00000485842 CEBPBP17676 345 aa12.58□□□□□ -0.4
HPS4-214ENST00000485842 PON1P27169 355 aa12.58□□□□□ -0.4
HPS4-214ENST00000485842 CACNA2D1P54289 1103 aa12.58□□□□□ -0.4
HPS4-214ENST00000485842 RAD23BP54727 409 aa12.58□□□□□ -0.4
HPS4-214ENST00000485842 IFRD2Q12894 506 aaPredicted RBP12.58□□□□□ -0.4
HPS4-214ENST00000485842 MTMR3Q13615 1198 aa12.58□□□□□ -0.4
HPS4-214ENST00000485842 IQCB1Q15051 598 aa12.58□□□□□ -0.4
HPS4-214ENST00000485842 FKBP15Q5T1M5 1219 aa12.58□□□□□ -0.4
HPS4-214ENST00000485842 OTOP3Q7RTS5 596 aa12.58□□□□□ -0.4
HPS4-214ENST00000485842 DNAJB7Q7Z6W7 309 aaPredicted RBP12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms