RNA–Protein interactions for RNA: ENST00000485749.1

RTN4-213, Transcript of reticulon 4, humanhuman

TSL 2

Gene RTN4, Length 832 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-213ENST00000485749 JMJD4Q9H9V9 463 aa4.88□□□□□ -1.63
RTN4-213ENST00000485749 CERS4Q9HA82 394 aa4.88□□□□□ -1.63
RTN4-213ENST00000485749 DMRT3Q9NQL9 472 aa4.88□□□□□ -1.63
RTN4-213ENST00000485749 ITM2CQ9NQX7 267 aa4.88□□□□□ -1.63
RTN4-213ENST00000485749 PLSCR4Q9NRQ2 329 aa4.88□□□□□ -1.63
RTN4-213ENST00000485749 SIRT5Q9NXA8 310 aa4.88□□□□□ -1.63
RTN4-213ENST00000485749 ORC3Q9UBD5 711 aaPredicted RBP4.88□□□□□ -1.63
RTN4-213ENST00000485749 TNFRSF10DQ9UBN6 386 aa4.88□□□□□ -1.63
RTN4-213ENST00000485749 VPS28Q9UK41 221 aa4.88□□□□□ -1.63
RTN4-213ENST00000485749 DENND2AQ9ULE3 1009 aa4.88□□□□□ -1.63
RTN4-213ENST00000485749 MAGED2Q9UNF1 606 aaPredicted RBP4.88□□□□□ -1.63
RTN4-213ENST00000485749 PCDHGB6Q9Y5F9 930 aa4.88□□□□□ -1.63
RTN4-213ENST00000485749 IRAK3Q9Y616 596 aa4.88□□□□□ -1.63
RTN4-213ENST00000485749 ERICH3Q5RHP9 1530 aa4.87□□□□□ -1.63
RTN4-213ENST00000485749 A0A088AWK7 358 aa4.87□□□□□ -1.63
RTN4-213ENST00000485749 A0A0B4J269 797 aa4.87□□□□□ -1.63
RTN4-213ENST00000485749 PRSS38A1L453 326 aa4.87□□□□□ -1.63
RTN4-213ENST00000485749 CTAGE9A4FU28 777 aa4.87□□□□□ -1.63
RTN4-213ENST00000485749 F5H0A9 414 aaPredicted RBP4.87□□□□□ -1.63
RTN4-213ENST00000485749 KCNK3O14649 394 aa4.87□□□□□ -1.63
RTN4-213ENST00000485749 IKBKBO14920 756 aa4.87□□□□□ -1.63
RTN4-213ENST00000485749 FOXP2O15409 715 aa4.87□□□□□ -1.63
RTN4-213ENST00000485749 RIPK2O43353 540 aa4.87□□□□□ -1.63
RTN4-213ENST00000485749 BUB1BO60566 1050 aaPredicted RBP4.87□□□□□ -1.63
RTN4-213ENST00000485749 KINO60870 393 aaKnown RBP4.87□□□□□ -1.63
RTN4-213ENST00000485749 RTN2O75298 545 aa4.87□□□□□ -1.63
RTN4-213ENST00000485749 DAB1O75553 588 aa4.87□□□□□ -1.63
RTN4-213ENST00000485749 USP2O75604 605 aaPredicted RBP4.87□□□□□ -1.63
RTN4-213ENST00000485749 EPN2O95208 641 aa4.87□□□□□ -1.63
RTN4-213ENST00000485749 SLU7O95391 586 aaKnown RBP4.87□□□□□ -1.63
RTN4-213ENST00000485749 C4BPAP04003 597 aaKnown RBP4.87□□□□□ -1.63
RTN4-213ENST00000485749 RPLP2P05387 115 aaKnown RBP4.87□□□□□ -1.63
RTN4-213ENST00000485749 POLBP06746 335 aa4.87□□□□□ -1.63
RTN4-213ENST00000485749 SRGAP2BP0DMP2 458 aa4.87□□□□□ -1.63
RTN4-213ENST00000485749 PCP11498 1178 aaKnown RBP4.87□□□□□ -1.63
RTN4-213ENST00000485749 ABCB4P21439 1286 aa4.87□□□□□ -1.63
RTN4-213ENST00000485749 IL6STP40189 918 aaPredicted RBP4.87□□□□□ -1.63
RTN4-213ENST00000485749 ATP5OP48047 213 aa4.87□□□□□ -1.63
RTN4-213ENST00000485749 IFNAR2P48551 515 aa4.87□□□□□ -1.63
RTN4-213ENST00000485749 ALDH3A2P51648 485 aa4.87□□□□□ -1.63
RTN4-213ENST00000485749 GTF2A1P52655 376 aaPredicted RBP4.87□□□□□ -1.63
RTN4-213ENST00000485749 BLVRAP53004 296 aa4.87□□□□□ -1.63
RTN4-213ENST00000485749 ARL4CP56559 192 aa4.87□□□□□ -1.63
RTN4-213ENST00000485749 ARF3P61204 181 aaPredicted RBP4.87□□□□□ -1.63
RTN4-213ENST00000485749 ARF1P84077 181 aaKnown RBP4.87□□□□□ -1.63
RTN4-213ENST00000485749 TEKQ02763 1124 aa4.87□□□□□ -1.63
RTN4-213ENST00000485749 TMEM62Q0P6H9 643 aa4.87□□□□□ -1.63
RTN4-213ENST00000485749 CUL4AQ13619 759 aa4.87□□□□□ -1.63
RTN4-213ENST00000485749 NAA25Q14CX7 972 aa4.87□□□□□ -1.63
RTN4-213ENST00000485749 SEC23AQ15436 765 aa4.87□□□□□ -1.63
RTN4-213ENST00000485749 ARL13BQ3SXY8 428 aa4.87□□□□□ -1.63
RTN4-213ENST00000485749 CEP55Q53EZ4 464 aa4.87□□□□□ -1.63
RTN4-213ENST00000485749 CCDC178Q5BJE1 867 aa4.87□□□□□ -1.63
RTN4-213ENST00000485749 TTC38Q5R3I4 469 aa4.87□□□□□ -1.63
RTN4-213ENST00000485749 HAUS3Q68CZ6 603 aa4.87□□□□□ -1.63
RTN4-213ENST00000485749 LIN54Q6MZP7 749 aa4.87□□□□□ -1.63
RTN4-213ENST00000485749 RFX8Q6ZV50 586 aa4.87□□□□□ -1.63
RTN4-213ENST00000485749 INTS8Q75QN2 995 aaKnown RBP4.87□□□□□ -1.63
RTN4-213ENST00000485749 GPR155Q7Z3F1 870 aa4.87□□□□□ -1.63
RTN4-213ENST00000485749 HEATR4Q86WZ0 1026 aa4.87□□□□□ -1.63
RTN4-213ENST00000485749 VPS52Q8N1B4 723 aa4.87□□□□□ -1.63
RTN4-213ENST00000485749 CCDC33Q8N5R6 958 aa4.87□□□□□ -1.63
RTN4-213ENST00000485749 ACMSDQ8TDX5 336 aa4.87□□□□□ -1.63
RTN4-213ENST00000485749 TBC1D22AQ8WUA7 517 aa4.87□□□□□ -1.63
RTN4-213ENST00000485749 TRAPPC12Q8WVT3 735 aa4.87□□□□□ -1.63
RTN4-213ENST00000485749 HSPH1Q92598 858 aa4.87□□□□□ -1.63
RTN4-213ENST00000485749 CASP10Q92851 521 aa4.87□□□□□ -1.63
RTN4-213ENST00000485749 FATE1Q969F0 183 aa4.87□□□□□ -1.63
RTN4-213ENST00000485749 LRRC45Q96CN5 670 aa4.87□□□□□ -1.63
RTN4-213ENST00000485749 CHFRQ96EP1 664 aa4.87□□□□□ -1.63
RTN4-213ENST00000485749 APIPQ96GX9 242 aa4.87□□□□□ -1.63
RTN4-213ENST00000485749 COG3Q96JB2 828 aa4.87□□□□□ -1.63
RTN4-213ENST00000485749 SIGLEC10Q96LC7 697 aa4.87□□□□□ -1.63
RTN4-213ENST00000485749 C20orf173Q96LM9 149 aa4.87□□□□□ -1.63
RTN4-213ENST00000485749 KCNC2Q96PR1 638 aa4.87□□□□□ -1.63
RTN4-213ENST00000485749 SLC2A13Q96QE2 648 aa4.87□□□□□ -1.63
RTN4-213ENST00000485749 CGRRF1Q99675 332 aa4.87□□□□□ -1.63
RTN4-213ENST00000485749 TUBA1CQ9BQE3 449 aa4.87□□□□□ -1.63
RTN4-213ENST00000485749 COLEC11Q9BWP8 271 aa4.87□□□□□ -1.63
RTN4-213ENST00000485749 KRT84Q9NSB2 600 aa4.87□□□□□ -1.63
RTN4-213ENST00000485749 IL20Q9NYY1 176 aa4.87□□□□□ -1.63
RTN4-213ENST00000485749 CHMP5Q9NZZ3 219 aa4.87□□□□□ -1.63
RTN4-213ENST00000485749 MARCH2Q9P0N8 246 aa4.87□□□□□ -1.63
RTN4-213ENST00000485749 TBC1D14Q9P2M4 693 aa4.87□□□□□ -1.63
RTN4-213ENST00000485749 TMPRSS11EQ9UL52 423 aa4.87□□□□□ -1.63
RTN4-213ENST00000485749 GRID1Q9ULK0 1009 aa4.87□□□□□ -1.63
RTN4-213ENST00000485749 EDARQ9UNE0 448 aa4.87□□□□□ -1.63
RTN4-213ENST00000485749 CNPY2Q9Y2B0 182 aa4.87□□□□□ -1.63
RTN4-213ENST00000485749 STXBP5LQ9Y2K9 1186 aa4.87□□□□□ -1.63
RTN4-213ENST00000485749 TMED5Q9Y3A6 229 aa4.87□□□□□ -1.63
RTN4-213ENST00000485749 ZNF711Q9Y462 761 aa4.87□□□□□ -1.63
RTN4-213ENST00000485749 ASB1Q9Y576 335 aa4.87□□□□□ -1.63
RTN4-213ENST00000485749 CFAP20Q9Y6A4 193 aaKnown RBP4.87□□□□□ -1.63
RTN4-213ENST00000485749 TMEM94Q12767 1356 aa4.87□□□□□ -1.63
RTN4-213ENST00000485749 RUSC2Q8N2Y8 1516 aa4.87□□□□□ -1.63
RTN4-213ENST00000485749 A0A087WV62 115 aa4.86□□□□□ -1.63
RTN4-213ENST00000485749 MYOCOSA0A1B0GUC4 107 aa4.86□□□□□ -1.63
RTN4-213ENST00000485749 A0A1W2PPH5 198 aa4.86□□□□□ -1.63
RTN4-213ENST00000485749 A0A1W2PQ45 241 aaPredicted RBP4.86□□□□□ -1.63
RTN4-213ENST00000485749 A0A1W2PQY0 241 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms