RNA–Protein interactions for RNA: ENST00000485567.1

FN1-222, Transcript of fibronectin 1, human

TSL 1 (best)

Gene FN1, Length 584 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FN1-222	ENST00000485567	ZNF69	Q9UC07	566 aa		4.81	□□□□□ -1.64
FN1-222	ENST00000485567	CA14	Q9ULX7	337 aa		4.81	□□□□□ -1.64
FN1-222	ENST00000485567	CDY1	Q9Y6F8	540 aa		4.81	□□□□□ -1.64
FN1-222	ENST00000485567	XDH	P47989	1333 aa		4.8	□□□□□ -1.64
FN1-222	ENST00000485567	DBX1	A6NMT0	343 aa		4.8	□□□□□ -1.64
FN1-222	ENST00000485567	CAPN14	A8MX76	684 aa		4.8	□□□□□ -1.64
FN1-222	ENST00000485567	PATE3	B3GLJ2	98 aa		4.8	□□□□□ -1.64
FN1-222	ENST00000485567		H7C4K7	107 aa		4.8	□□□□□ -1.64
FN1-222	ENST00000485567	TRIM24	O15164	1050 aa		4.8	□□□□□ -1.64
FN1-222	ENST00000485567	SUN1	O94901	812 aa		4.8	□□□□□ -1.64
FN1-222	ENST00000485567	HLA-DOA	P06340	250 aa		4.8	□□□□□ -1.64
FN1-222	ENST00000485567	VEGFA	P15692	232 aa	Predicted RBP	4.8	□□□□□ -1.64
FN1-222	ENST00000485567	BMP7	P18075	431 aa		4.8	□□□□□ -1.64
FN1-222	ENST00000485567	COMT	P21964	271 aa		4.8	□□□□□ -1.64
FN1-222	ENST00000485567	FGFR4	P22455	802 aa		4.8	□□□□□ -1.64
FN1-222	ENST00000485567	PTDSS1	P48651	473 aa	Known RBP	4.8	□□□□□ -1.64
FN1-222	ENST00000485567	PXN	P49023	591 aa	Predicted RBP	4.8	□□□□□ -1.64
FN1-222	ENST00000485567	MAN2A2	P49641	1150 aa		4.8	□□□□□ -1.64
FN1-222	ENST00000485567	ANXA11	P50995	505 aa	Known RBP	4.8	□□□□□ -1.64
FN1-222	ENST00000485567	PRKG1	Q13976	671 aa		4.8	□□□□□ -1.64
FN1-222	ENST00000485567	MRNIP	Q6NTE8	343 aa		4.8	□□□□□ -1.64
FN1-222	ENST00000485567	MZT2A	Q6P582	158 aa		4.8	□□□□□ -1.64
FN1-222	ENST00000485567	GLB1L	Q6UWU2	654 aa		4.8	□□□□□ -1.64
FN1-222	ENST00000485567	SLC30A10	Q6XR72	485 aa		4.8	□□□□□ -1.64
FN1-222	ENST00000485567	RFX8	Q6ZV50	586 aa		4.8	□□□□□ -1.64
FN1-222	ENST00000485567	USP49	Q70CQ1	688 aa		4.8	□□□□□ -1.64
FN1-222	ENST00000485567	GALNT15	Q8N3T1	639 aa		4.8	□□□□□ -1.64
FN1-222	ENST00000485567	NSUN7	Q8NE18	718 aa	Known RBP	4.8	□□□□□ -1.64
FN1-222	ENST00000485567	FEZF2	Q8TBJ5	459 aa		4.8	□□□□□ -1.64
FN1-222	ENST00000485567	IPO4	Q8TEX9	1081 aa	Known RBP	4.8	□□□□□ -1.64
FN1-222	ENST00000485567	TBATA	Q96M53	351 aa		4.8	□□□□□ -1.64
FN1-222	ENST00000485567	FAM227B	Q96M60	508 aa		4.8	□□□□□ -1.64
FN1-222	ENST00000485567	NELL2	Q99435	816 aa		4.8	□□□□□ -1.64
FN1-222	ENST00000485567	SLC46A2	Q9BY10	475 aa		4.8	□□□□□ -1.64
FN1-222	ENST00000485567	GPR87	Q9BY21	358 aa		4.8	□□□□□ -1.64
FN1-222	ENST00000485567	PCDHAC1	Q9H158	963 aa		4.8	□□□□□ -1.64
FN1-222	ENST00000485567	ZMYND8	Q9ULU4	1186 aa	Predicted RBP	4.8	□□□□□ -1.64
FN1-222	ENST00000485567	CHST2	Q9Y4C5	530 aa		4.8	□□□□□ -1.64
FN1-222	ENST00000485567	USP15	Q9Y4E8	981 aa	Predicted RBP	4.8	□□□□□ -1.64
FN1-222	ENST00000485567	DTNA	Q9Y4J8	743 aa		4.8	□□□□□ -1.64
FN1-222	ENST00000485567		A0A1W2PS29	197 aa		4.79	□□□□□ -1.64
FN1-222	ENST00000485567	KRTAP23-1	A1A580	65 aa		4.79	□□□□□ -1.64
FN1-222	ENST00000485567	OR2W5	A6NFC9	320 aa		4.79	□□□□□ -1.64
FN1-222	ENST00000485567		M0R3H8	397 aa		4.79	□□□□□ -1.64
FN1-222	ENST00000485567	PIP5K1B	O14986	540 aa		4.79	□□□□□ -1.64
FN1-222	ENST00000485567	RRP9	O43818	475 aa	Known RBP	4.79	□□□□□ -1.64
FN1-222	ENST00000485567	COQ9	O75208	318 aa		4.79	□□□□□ -1.64
FN1-222	ENST00000485567	WDHD1	O75717	1129 aa	Predicted RBP	4.79	□□□□□ -1.64
FN1-222	ENST00000485567	GLP2R	O95838	553 aa		4.79	□□□□□ -1.64
FN1-222	ENST00000485567	GPANK1	O95872	356 aa		4.79	□□□□□ -1.64
FN1-222	ENST00000485567	KCNA3	P22001	575 aa		4.79	□□□□□ -1.64
FN1-222	ENST00000485567	SLC5A2	P31639	672 aa		4.79	□□□□□ -1.64
FN1-222	ENST00000485567	ATIC	P31939	592 aa		4.79	□□□□□ -1.64
FN1-222	ENST00000485567	APOBEC3A	P31941	199 aa	Predicted RBP	4.79	□□□□□ -1.64
FN1-222	ENST00000485567	ZNF134	P52741	427 aa		4.79	□□□□□ -1.64
FN1-222	ENST00000485567	LILRA4	P59901	499 aa		4.79	□□□□□ -1.64
FN1-222	ENST00000485567	RNASE9	P60153	205 aa	Known RBP	4.79	□□□□□ -1.64
FN1-222	ENST00000485567	KRT17	Q04695	432 aa		4.79	□□□□□ -1.64
FN1-222	ENST00000485567	DYRK1A	Q13627	763 aa		4.79	□□□□□ -1.64
FN1-222	ENST00000485567	HLX	Q14774	488 aa	Predicted RBP	4.79	□□□□□ -1.64
FN1-222	ENST00000485567	POSTN	Q15063	836 aa		4.79	□□□□□ -1.64
FN1-222	ENST00000485567	RALBP1	Q15311	655 aa		4.79	□□□□□ -1.64
FN1-222	ENST00000485567	UBXN11	Q5T124	520 aa		4.79	□□□□□ -1.64
FN1-222	ENST00000485567	FAXC	Q5TGI0	409 aa		4.79	□□□□□ -1.64
FN1-222	ENST00000485567	RAP1GAP2	Q684P5	730 aa		4.79	□□□□□ -1.64
FN1-222	ENST00000485567	SFRP4	Q6FHJ7	346 aa	Predicted RBP	4.79	□□□□□ -1.64
FN1-222	ENST00000485567	CCDC70	Q6NSX1	233 aa		4.79	□□□□□ -1.64
FN1-222	ENST00000485567	CRTC1	Q6UUV9	634 aa		4.79	□□□□□ -1.64
FN1-222	ENST00000485567	CYP26C1	Q6V0L0	522 aa		4.79	□□□□□ -1.64
FN1-222	ENST00000485567	LIMS2	Q7Z4I7	341 aa		4.79	□□□□□ -1.64
FN1-222	ENST00000485567	CLNK	Q7Z7G1	428 aa		4.79	□□□□□ -1.64
FN1-222	ENST00000485567	ZNF280B	Q86YH2	543 aa		4.79	□□□□□ -1.64
FN1-222	ENST00000485567		Q8TCH9	128 aa		4.79	□□□□□ -1.64
FN1-222	ENST00000485567	BPIFB1	Q8TDL5	484 aa		4.79	□□□□□ -1.64
FN1-222	ENST00000485567	STYX	Q8WUJ0	223 aa		4.79	□□□□□ -1.64
FN1-222	ENST00000485567	EDA	Q92838	391 aa		4.79	□□□□□ -1.64
FN1-222	ENST00000485567	ZNF668	Q96K58	619 aa	Predicted RBP	4.79	□□□□□ -1.64
FN1-222	ENST00000485567	KATNAL1	Q9BW62	490 aa		4.79	□□□□□ -1.64
FN1-222	ENST00000485567	TRIM5	Q9C035	493 aa		4.79	□□□□□ -1.64
FN1-222	ENST00000485567	XYLT2	Q9H1B5	865 aa		4.79	□□□□□ -1.64
FN1-222	ENST00000485567	SAGE1	Q9NXZ1	904 aa		4.79	□□□□□ -1.64
FN1-222	ENST00000485567	C9orf78	Q9NZ63	289 aa	Predicted RBP	4.79	□□□□□ -1.64
FN1-222	ENST00000485567	RNF181	Q9P0P0	153 aa		4.79	□□□□□ -1.64
FN1-222	ENST00000485567	HERC5	Q9UII4	1024 aa	Known RBP	4.79	□□□□□ -1.64
FN1-222	ENST00000485567	TBC1D30	Q9Y2I9	924 aa		4.79	□□□□□ -1.64
FN1-222	ENST00000485567	PRAMEF33	A0A0G2JMD5	474 aa		4.78	□□□□□ -1.64
FN1-222	ENST00000485567	CCDC78	A2IDD5	438 aa		4.78	□□□□□ -1.64
FN1-222	ENST00000485567	AQP12B	A6NM10	295 aa		4.78	□□□□□ -1.64
FN1-222	ENST00000485567	ZNF185	O15231	689 aa		4.78	□□□□□ -1.64
FN1-222	ENST00000485567	PRAMEF10	O60809	474 aa		4.78	□□□□□ -1.64
FN1-222	ENST00000485567	ZNF623	O75123	536 aa		4.78	□□□□□ -1.64
FN1-222	ENST00000485567	PIAS2	O75928	621 aa		4.78	□□□□□ -1.64
FN1-222	ENST00000485567	RECQL4	O94761	1208 aa		4.78	□□□□□ -1.64
FN1-222	ENST00000485567	NPPB	P16860	134 aa		4.78	□□□□□ -1.64
FN1-222	ENST00000485567	CD53	P19397	219 aa		4.78	□□□□□ -1.64
FN1-222	ENST00000485567	ITGAL	P20701	1170 aa		4.78	□□□□□ -1.64
FN1-222	ENST00000485567	ACO1	P21399	889 aa	Known RBP	4.78	□□□□□ -1.64
FN1-222	ENST00000485567	PPIF	P30405	207 aa	Known RBP	4.78	□□□□□ -1.64
FN1-222	ENST00000485567	SCNN1G	P51170	649 aa		4.78	□□□□□ -1.64
FN1-222	ENST00000485567	NSUN2	Q08J23	767 aa	Known RBP eCLIP	4.78	□□□□□ -1.64

Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms