RNA–Protein interactions for RNA: ENST00000485024.1

VPS8-223, Transcript of VPS8, CORVET complex subunit, human

TSL 2

Gene VPS8, Length 477 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VPS8-223	ENST00000485024	TRIM63	Q969Q1	353 aa		4.7	□□□□□ -1.66
VPS8-223	ENST00000485024	TMX3	Q96JJ7	454 aa		4.7	□□□□□ -1.66
VPS8-223	ENST00000485024	PPP1R10	Q96QC0	940 aa	Known RBP	4.7	□□□□□ -1.66
VPS8-223	ENST00000485024	NAP1L4	Q99733	375 aa	Known RBP	4.7	□□□□□ -1.66
VPS8-223	ENST00000485024	C22orf23	Q9BZE7	217 aa		4.7	□□□□□ -1.66
VPS8-223	ENST00000485024	PPCS	Q9HAB8	311 aa		4.7	□□□□□ -1.66
VPS8-223	ENST00000485024	GPRC5D	Q9NZD1	345 aa		4.7	□□□□□ -1.66
VPS8-223	ENST00000485024	ABCF2	Q9UG63	623 aa		4.7	□□□□□ -1.66
VPS8-223	ENST00000485024	HDAC5	Q9UQL6	1122 aa		4.7	□□□□□ -1.66
VPS8-223	ENST00000485024	ZNF804B	A4D1E1	1349 aa		4.7	□□□□□ -1.66
VPS8-223	ENST00000485024	MYBBP1A	Q9BQG0	1328 aa	Known RBP	4.7	□□□□□ -1.66
VPS8-223	ENST00000485024	CEP170	Q5SW79	1584 aa		4.7	□□□□□ -1.66
VPS8-223	ENST00000485024		H3BNC9	293 aa		4.69	□□□□□ -1.66
VPS8-223	ENST00000485024	ADCY6	O43306	1168 aa		4.69	□□□□□ -1.66
VPS8-223	ENST00000485024	GPR32	O75388	356 aa		4.69	□□□□□ -1.66
VPS8-223	ENST00000485024	DDC	P20711	480 aa		4.69	□□□□□ -1.66
VPS8-223	ENST00000485024	MAL	P21145	153 aa		4.69	□□□□□ -1.66
VPS8-223	ENST00000485024	ITPKB	P27987	946 aa		4.69	□□□□□ -1.66
VPS8-223	ENST00000485024	SERPINB3	P29508	390 aa		4.69	□□□□□ -1.66
VPS8-223	ENST00000485024	SREBF1	P36956	1147 aa		4.69	□□□□□ -1.66
VPS8-223	ENST00000485024	PPM1F	P49593	454 aa	Predicted RBP	4.69	□□□□□ -1.66
VPS8-223	ENST00000485024	CTXN1	P60606	82 aa		4.69	□□□□□ -1.66
VPS8-223	ENST00000485024	CREM	Q03060	361 aa		4.69	□□□□□ -1.66
VPS8-223	ENST00000485024	TLE1	Q04724	770 aa		4.69	□□□□□ -1.66
VPS8-223	ENST00000485024	TMEM95	Q3KNT9	176 aa		4.69	□□□□□ -1.66
VPS8-223	ENST00000485024	SLC44A4	Q53GD3	710 aa		4.69	□□□□□ -1.66
VPS8-223	ENST00000485024	KIAA1614	Q5VZ46	1190 aa		4.69	□□□□□ -1.66
VPS8-223	ENST00000485024	IZUMO3	Q5VZ72	239 aa		4.69	□□□□□ -1.66
VPS8-223	ENST00000485024	APOA5	Q6Q788	366 aa		4.69	□□□□□ -1.66
VPS8-223	ENST00000485024	ABHD15	Q6UXT9	468 aa		4.69	□□□□□ -1.66
VPS8-223	ENST00000485024	PTF1A	Q7RTS3	328 aa		4.69	□□□□□ -1.66
VPS8-223	ENST00000485024	CPXCR1	Q8N123	301 aa		4.69	□□□□□ -1.66
VPS8-223	ENST00000485024	ANKRD42	Q8N9B4	389 aa		4.69	□□□□□ -1.66
VPS8-223	ENST00000485024	VPS37A	Q8NEZ2	397 aa		4.69	□□□□□ -1.66
VPS8-223	ENST00000485024	CCHCR1	Q8TD31	782 aa		4.69	□□□□□ -1.66
VPS8-223	ENST00000485024	PNISR	Q8TF01	805 aa	Known RBP	4.69	□□□□□ -1.66
VPS8-223	ENST00000485024	RIPOR3	Q96MK2	946 aa		4.69	□□□□□ -1.66
VPS8-223	ENST00000485024	SCLT1	Q96NL6	688 aa		4.69	□□□□□ -1.66
VPS8-223	ENST00000485024	CDC5L	Q99459	802 aa	Known RBP	4.69	□□□□□ -1.66
VPS8-223	ENST00000485024	COLEC11	Q9BWP8	271 aa		4.69	□□□□□ -1.66
VPS8-223	ENST00000485024	APOL5	Q9BWW9	433 aa		4.69	□□□□□ -1.66
VPS8-223	ENST00000485024	ARMT1	Q9H993	441 aa		4.69	□□□□□ -1.66
VPS8-223	ENST00000485024	SERHL	Q9NQF3	203 aa		4.69	□□□□□ -1.66
VPS8-223	ENST00000485024	PCDHA3	Q9Y5H8	950 aa		4.69	□□□□□ -1.66
VPS8-223	ENST00000485024	FPGT-TNNI3K	V9GXZ4	949 aa		4.69	□□□□□ -1.66
VPS8-223	ENST00000485024	CEP350	Q5VT06	3117 aa		4.69	□□□□□ -1.66
VPS8-223	ENST00000485024	BCORL1	Q5H9F3	1711 aa		4.69	□□□□□ -1.66
VPS8-223	ENST00000485024	CDKL5	O76039	1030 aa		4.68	□□□□□ -1.66
VPS8-223	ENST00000485024	IL18RAP	O95256	599 aa		4.68	□□□□□ -1.66
VPS8-223	ENST00000485024	GNAI3	P08754	354 aa		4.68	□□□□□ -1.66
VPS8-223	ENST00000485024	MTHFD1	P11586	935 aa	Known RBP	4.68	□□□□□ -1.66
VPS8-223	ENST00000485024	BRAF	P15056	766 aa		4.68	□□□□□ -1.66
VPS8-223	ENST00000485024	SLC7A1	P30825	629 aa		4.68	□□□□□ -1.66
VPS8-223	ENST00000485024	PIK3CB	P42338	1070 aa		4.68	□□□□□ -1.66
VPS8-223	ENST00000485024	CCT5	P48643	541 aa		4.68	□□□□□ -1.66
VPS8-223	ENST00000485024	PRIM2	P49643	509 aa		4.68	□□□□□ -1.66
VPS8-223	ENST00000485024	CASP5	P51878	434 aa		4.68	□□□□□ -1.66
VPS8-223	ENST00000485024	KRTAP10-5	P60370	271 aa		4.68	□□□□□ -1.66
VPS8-223	ENST00000485024	GNAI1	P63096	354 aa		4.68	□□□□□ -1.66
VPS8-223	ENST00000485024	MXRA7	P84157	204 aa		4.68	□□□□□ -1.66
VPS8-223	ENST00000485024	TNFAIP2	Q03169	654 aa		4.68	□□□□□ -1.66
VPS8-223	ENST00000485024	TARDBP	Q13148	414 aa	Known RBP eCLIP	4.68	□□□□□ -1.66
VPS8-223	ENST00000485024	SP140	Q13342	867 aa		4.68	□□□□□ -1.66
VPS8-223	ENST00000485024	KLF9	Q13886	244 aa	Predicted RBP	4.68	□□□□□ -1.66
VPS8-223	ENST00000485024	PLS1	Q14651	629 aa		4.68	□□□□□ -1.66
VPS8-223	ENST00000485024	CNGA2	Q16280	664 aa		4.68	□□□□□ -1.66
VPS8-223	ENST00000485024	MTX3	Q5HYI7	312 aa		4.68	□□□□□ -1.66
VPS8-223	ENST00000485024	KHDC1L	Q5JSQ8	128 aa		4.68	□□□□□ -1.66
VPS8-223	ENST00000485024	DACT2	Q5SW24	774 aa		4.68	□□□□□ -1.66
VPS8-223	ENST00000485024	XRRA1	Q6P2D8	792 aa		4.68	□□□□□ -1.66
VPS8-223	ENST00000485024		Q6ZVL8	140 aa		4.68	□□□□□ -1.66
VPS8-223	ENST00000485024	AOPEP	Q8N6M6	819 aa		4.68	□□□□□ -1.66
VPS8-223	ENST00000485024	SPATA5	Q8NB90	893 aa		4.68	□□□□□ -1.66
VPS8-223	ENST00000485024	PIK3C3	Q8NEB9	887 aa		4.68	□□□□□ -1.66
VPS8-223	ENST00000485024	MYRIP	Q8NFW9	859 aa		4.68	□□□□□ -1.66
VPS8-223	ENST00000485024	OR10H5	Q8NGA6	315 aa		4.68	□□□□□ -1.66
VPS8-223	ENST00000485024	OR5M3	Q8NGP4	307 aa		4.68	□□□□□ -1.66
VPS8-223	ENST00000485024	IL31RA	Q8NI17	732 aa		4.68	□□□□□ -1.66
VPS8-223	ENST00000485024	IFI44	Q8TCB0	444 aa		4.68	□□□□□ -1.66
VPS8-223	ENST00000485024	KBTBD7	Q8WVZ9	684 aa		4.68	□□□□□ -1.66
VPS8-223	ENST00000485024	MSLNL	Q96KJ4	702 aa		4.68	□□□□□ -1.66
VPS8-223	ENST00000485024	EIF2A	Q9BY44	585 aa	Known RBP	4.68	□□□□□ -1.66
VPS8-223	ENST00000485024	ZMAT3	Q9HA38	289 aa	Known RBP	4.68	□□□□□ -1.66
VPS8-223	ENST00000485024	PTPRH	Q9HD43	1115 aa		4.68	□□□□□ -1.66
VPS8-223	ENST00000485024	ZDHHC8	Q9ULC8	765 aa		4.68	□□□□□ -1.66
VPS8-223	ENST00000485024	ZNF521	Q96K83	1311 aa		4.68	□□□□□ -1.66
VPS8-223	ENST00000485024	RAPGEF6	Q8TEU7	1601 aa		4.68	□□□□□ -1.66
VPS8-223	ENST00000485024	TDRD9	Q8NDG6	1382 aa	Known RBP	4.67	□□□□□ -1.66
VPS8-223	ENST00000485024	POGZ	Q7Z3K3	1410 aa		4.67	□□□□□ -1.66
VPS8-223	ENST00000485024	ITGA10	O75578	1167 aa		4.67	□□□□□ -1.66
VPS8-223	ENST00000485024	TH	P07101	528 aa		4.67	□□□□□ -1.66
VPS8-223	ENST00000485024	TNFSF4	P23510	183 aa		4.67	□□□□□ -1.66
VPS8-223	ENST00000485024	GUCY1A2	P33402	732 aa		4.67	□□□□□ -1.66
VPS8-223	ENST00000485024	PTPN7	P35236	360 aa		4.67	□□□□□ -1.66
VPS8-223	ENST00000485024	STT3A	P46977	705 aa		4.67	□□□□□ -1.66
VPS8-223	ENST00000485024	SLC6A9	P48067	706 aa		4.67	□□□□□ -1.66
VPS8-223	ENST00000485024	TRAPPC10	P48553	1259 aa		4.67	□□□□□ -1.66
VPS8-223	ENST00000485024	CCT4	P50991	539 aa	Known RBP	4.67	□□□□□ -1.66
VPS8-223	ENST00000485024	MRPS35	P82673	323 aa	Known RBP	4.67	□□□□□ -1.66
VPS8-223	ENST00000485024	POU5F1B	Q06416	359 aa		4.67	□□□□□ -1.66

Retrieved 100 of 20,778 RNA–protein pairs in 21 ms