RNA–Protein interactions for RNA: ENST00000484520.1

SPTA1-206, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 3

Gene SPTA1, Length 769 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-206ENST00000484520 C4BPAP04003 597 aaKnown RBP4.83□□□□□ -1.64
SPTA1-206ENST00000484520 KRT15P19012 456 aa4.83□□□□□ -1.64
SPTA1-206ENST00000484520 CMA1P23946 247 aa4.83□□□□□ -1.64
SPTA1-206ENST00000484520 ERCC5P28715 1186 aaPredicted RBP4.83□□□□□ -1.64
SPTA1-206ENST00000484520 HOXA7P31268 230 aaPredicted RBP4.83□□□□□ -1.64
SPTA1-206ENST00000484520 GUCY1A2P33402 732 aa4.83□□□□□ -1.64
SPTA1-206ENST00000484520 EPHX2P34913 555 aa4.83□□□□□ -1.64
SPTA1-206ENST00000484520 COPB2P35606 906 aa4.83□□□□□ -1.64
SPTA1-206ENST00000484520 PRPHP41219 470 aa4.83□□□□□ -1.64
SPTA1-206ENST00000484520 ECE1P42892 770 aa4.83□□□□□ -1.64
SPTA1-206ENST00000484520 STAT5BP51692 787 aa4.83□□□□□ -1.64
SPTA1-206ENST00000484520 IKQ13123 557 aaPredicted RBP4.83□□□□□ -1.64
SPTA1-206ENST00000484520 PABPC4Q13310 644 aaKnown RBP eCLIP4.83□□□□□ -1.64
SPTA1-206ENST00000484520 MOGSQ13724 837 aa4.83□□□□□ -1.64
SPTA1-206ENST00000484520 SLC39A14Q15043 492 aa4.83□□□□□ -1.64
SPTA1-206ENST00000484520 NONOQ15233 471 aaKnown RBP eCLIP4.83□□□□□ -1.64
SPTA1-206ENST00000484520 FIGNQ5HY92 759 aa4.83□□□□□ -1.64
SPTA1-206ENST00000484520 L1TD1Q5T7N2 865 aaKnown RBP4.83□□□□□ -1.64
SPTA1-206ENST00000484520 KANK2Q63ZY3 851 aa4.83□□□□□ -1.64
SPTA1-206ENST00000484520 TMEM200BQ69YZ2 307 aa4.83□□□□□ -1.64
SPTA1-206ENST00000484520 LAIR1Q6GTX8 287 aa4.83□□□□□ -1.64
SPTA1-206ENST00000484520 MOXD1Q6UVY6 613 aa4.83□□□□□ -1.64
SPTA1-206ENST00000484520 ARMC9Q7Z3E5 817 aa4.83□□□□□ -1.64
SPTA1-206ENST00000484520 KRT26Q7Z3Y9 468 aa4.83□□□□□ -1.64
SPTA1-206ENST00000484520 MCF2L2Q86YR7 1114 aa4.83□□□□□ -1.64
SPTA1-206ENST00000484520 RAB11FIP4Q86YS3 637 aa4.83□□□□□ -1.64
SPTA1-206ENST00000484520 SCUBE1Q8IWY4 988 aa4.83□□□□□ -1.64
SPTA1-206ENST00000484520 ELOA2Q8IYF1 753 aaPredicted RBP4.83□□□□□ -1.64
SPTA1-206ENST00000484520 RPUSD2Q8IZ73 545 aaKnown RBP4.83□□□□□ -1.64
SPTA1-206ENST00000484520 ADGRF4Q8IZF3 695 aa4.83□□□□□ -1.64
SPTA1-206ENST00000484520 PRPF38AQ8NAV1 312 aaKnown RBP4.83□□□□□ -1.64
SPTA1-206ENST00000484520 LINC00301Q8NCQ3 95 aa4.83□□□□□ -1.64
SPTA1-206ENST00000484520 WDR48Q8TAF3 677 aa4.83□□□□□ -1.64
SPTA1-206ENST00000484520 HNRNPLLQ8WVV9 542 aaKnown RBP4.83□□□□□ -1.64
SPTA1-206ENST00000484520 MRPS27Q92552 414 aaKnown RBP4.83□□□□□ -1.64
SPTA1-206ENST00000484520 AK8Q96MA6 479 aa4.83□□□□□ -1.64
SPTA1-206ENST00000484520 TIGD1Q96MW7 591 aa4.83□□□□□ -1.64
SPTA1-206ENST00000484520 GTPBP4Q9BZE4 634 aaKnown RBP4.83□□□□□ -1.64
SPTA1-206ENST00000484520 WDR26Q9H7D7 661 aa4.83□□□□□ -1.64
SPTA1-206ENST00000484520 PSTPIP2Q9H939 334 aa4.83□□□□□ -1.64
SPTA1-206ENST00000484520 MAGEF1Q9HAY2 307 aa4.83□□□□□ -1.64
SPTA1-206ENST00000484520 RIC8AQ9NPQ8 531 aa4.83□□□□□ -1.64
SPTA1-206ENST00000484520 UCKL1Q9NWZ5 548 aa4.83□□□□□ -1.64
SPTA1-206ENST00000484520 TMOD4Q9NZQ9 345 aa4.83□□□□□ -1.64
SPTA1-206ENST00000484520 VPS54Q9P1Q0 977 aa4.83□□□□□ -1.64
SPTA1-206ENST00000484520 CNPY2Q9Y2B0 182 aa4.83□□□□□ -1.64
SPTA1-206ENST00000484520 MRPL11Q9Y3B7 192 aaKnown RBP4.83□□□□□ -1.64
SPTA1-206ENST00000484520 SH3BP1Q9Y3L3 701 aa4.83□□□□□ -1.64
SPTA1-206ENST00000484520 CTDP1Q9Y5B0 961 aaPredicted RBP4.83□□□□□ -1.64
SPTA1-206ENST00000484520 PCDHAC2Q9Y5I4 1007 aa4.83□□□□□ -1.64
SPTA1-206ENST00000484520 MYO5AQ9Y4I1 1855 aaKnown RBP4.82□□□□□ -1.64
SPTA1-206ENST00000484520 TRAV20A0A0B4J274 112 aa4.82□□□□□ -1.64
SPTA1-206ENST00000484520 FAM237AA0A1B0GTK4 181 aa4.82□□□□□ -1.64
SPTA1-206ENST00000484520 PMS2P1A4D2B8 440 aa4.82□□□□□ -1.64
SPTA1-206ENST00000484520 SMCO2A6NFE2 343 aa4.82□□□□□ -1.64
SPTA1-206ENST00000484520 TMEM191CA6NGB0 347 aa4.82□□□□□ -1.64
SPTA1-206ENST00000484520 BTBD18B2RXH4 712 aa4.82□□□□□ -1.64
SPTA1-206ENST00000484520 CXCL11O14625 94 aa4.82□□□□□ -1.64
SPTA1-206ENST00000484520 KCNK3O14649 394 aa4.82□□□□□ -1.64
SPTA1-206ENST00000484520 CYTH3O43739 400 aa4.82□□□□□ -1.64
SPTA1-206ENST00000484520 ZBED4O75132 1171 aa4.82□□□□□ -1.64
SPTA1-206ENST00000484520 DDNO94850 711 aaPredicted RBP4.82□□□□□ -1.64
SPTA1-206ENST00000484520 MYL1P05976 194 aa4.82□□□□□ -1.64
SPTA1-206ENST00000484520 PYGMP11217 842 aa4.82□□□□□ -1.64
SPTA1-206ENST00000484520 LMO1P25800 156 aa4.82□□□□□ -1.64
SPTA1-206ENST00000484520 EPS15P42566 896 aa4.82□□□□□ -1.64
SPTA1-206ENST00000484520 SCNN1GP51170 649 aa4.82□□□□□ -1.64
SPTA1-206ENST00000484520 BACE1P56817 501 aa4.82□□□□□ -1.64
SPTA1-206ENST00000484520 JAM2P57087 298 aa4.82□□□□□ -1.64
SPTA1-206ENST00000484520 SLC25A3Q00325 362 aa4.82□□□□□ -1.64
SPTA1-206ENST00000484520 GUCY1B3Q02153 619 aa4.82□□□□□ -1.64
SPTA1-206ENST00000484520 PPATQ06203 517 aa4.82□□□□□ -1.64
SPTA1-206ENST00000484520 RIN1Q13671 783 aa4.82□□□□□ -1.64
SPTA1-206ENST00000484520 ZRSR1Q15695 479 aaKnown RBP4.82□□□□□ -1.64
SPTA1-206ENST00000484520 CDC37Q16543 378 aaPredicted RBP4.82□□□□□ -1.64
SPTA1-206ENST00000484520 DDR2Q16832 855 aa4.82□□□□□ -1.64
SPTA1-206ENST00000484520 TKFCQ3LXA3 575 aa4.82□□□□□ -1.64
SPTA1-206ENST00000484520 TTC38Q5R3I4 469 aa4.82□□□□□ -1.64
SPTA1-206ENST00000484520 MIGA2Q7L4E1 593 aa4.82□□□□□ -1.64
SPTA1-206ENST00000484520 FASTKD5Q7L8L6 764 aaKnown RBP4.82□□□□□ -1.64
SPTA1-206ENST00000484520 DPH6Q7L8W6 267 aa4.82□□□□□ -1.64
SPTA1-206ENST00000484520 NEK8Q86SG6 692 aa4.82□□□□□ -1.64
SPTA1-206ENST00000484520 HOMER1Q86YM7 354 aa4.82□□□□□ -1.64
SPTA1-206ENST00000484520 ANKRD13AQ8IZ07 590 aa4.82□□□□□ -1.64
SPTA1-206ENST00000484520 MB21D1Q8N884 522 aa4.82□□□□□ -1.64
SPTA1-206ENST00000484520 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.82□□□□□ -1.64
SPTA1-206ENST00000484520 ANP32BQ92688 251 aaKnown RBP4.82□□□□□ -1.64
SPTA1-206ENST00000484520 FBXW5Q969U6 566 aa4.82□□□□□ -1.64
SPTA1-206ENST00000484520 USP28Q96RU2 1077 aa4.82□□□□□ -1.64
SPTA1-206ENST00000484520 PIGSQ96S52 555 aa4.82□□□□□ -1.64
SPTA1-206ENST00000484520 SLF1Q9BQI6 1058 aa4.82□□□□□ -1.64
SPTA1-206ENST00000484520 OR10A5Q9H207 317 aa4.82□□□□□ -1.64
SPTA1-206ENST00000484520 RANBP17Q9H2T7 1088 aaKnown RBP4.82□□□□□ -1.64
SPTA1-206ENST00000484520 TAF1DQ9H5J8 278 aaPredicted RBP4.82□□□□□ -1.64
SPTA1-206ENST00000484520 JMJD4Q9H9V9 463 aa4.82□□□□□ -1.64
SPTA1-206ENST00000484520 GPRC5BQ9NZH0 403 aa4.82□□□□□ -1.64
SPTA1-206ENST00000484520 CBLCQ9ULV8 474 aa4.82□□□□□ -1.64
SPTA1-206ENST00000484520 PCDHA1Q9Y5I3 950 aa4.82□□□□□ -1.64
SPTA1-206ENST00000484520 GREB1LQ9C091 1923 aaPredicted RBP4.82□□□□□ -1.64
SPTA1-206ENST00000484520 ECM29Q5VYK3 1845 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms