RNA–Protein interactions for RNA: ENST00000484112.5

CPSF4-213, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-213ENST00000484112 SAAL1Q96ER3 474 aa10.75□□□□□ -0.69
CPSF4-213ENST00000484112 ZNF560Q96MR9 790 aa10.75□□□□□ -0.69
CPSF4-213ENST00000484112 GBP4Q96PP9 640 aa10.75□□□□□ -0.69
CPSF4-213ENST00000484112 CRISPLD1Q9H336 500 aa10.75□□□□□ -0.69
CPSF4-213ENST00000484112 KCTD10Q9H3F6 313 aa10.75□□□□□ -0.69
CPSF4-213ENST00000484112 ATXN3LQ9H3M9 355 aa10.75□□□□□ -0.69
CPSF4-213ENST00000484112 DPP3Q9NY33 737 aa10.75□□□□□ -0.69
CPSF4-213ENST00000484112 ITGA11Q9UKX5 1188 aa10.75□□□□□ -0.69
CPSF4-213ENST00000484112 DSEQ9UL01 958 aa10.75□□□□□ -0.69
CPSF4-213ENST00000484112 DMXL1Q9Y485 3027 aa10.75□□□□□ -0.69
CPSF4-213ENST00000484112 MYBPHLA2RUH7 354 aa10.74□□□□□ -0.69
CPSF4-213ENST00000484112 EXOC3O60645 756 aa10.74□□□□□ -0.69
CPSF4-213ENST00000484112 SOAT2O75908 522 aa10.74□□□□□ -0.69
CPSF4-213ENST00000484112 VNN2O95498 520 aa10.74□□□□□ -0.69
CPSF4-213ENST00000484112 NFICP08651 508 aa10.74□□□□□ -0.69
CPSF4-213ENST00000484112 TYMPP19971 482 aa10.74□□□□□ -0.69
CPSF4-213ENST00000484112 CTHP32929 405 aa10.74□□□□□ -0.69
CPSF4-213ENST00000484112 PXNP49023 591 aaPredicted RBP10.74□□□□□ -0.69
CPSF4-213ENST00000484112 MLLT6P55198 1093 aaPredicted RBP10.74□□□□□ -0.69
CPSF4-213ENST00000484112 FCHO2Q0JRZ9 810 aa10.74□□□□□ -0.69
CPSF4-213ENST00000484112 PNOCQ13519 176 aa10.74□□□□□ -0.69
CPSF4-213ENST00000484112 PSMD6Q15008 389 aa10.74□□□□□ -0.69
CPSF4-213ENST00000484112 EDRF1Q3B7T1 1238 aa10.74□□□□□ -0.69
CPSF4-213ENST00000484112 WDR44Q5JSH3 913 aa10.74□□□□□ -0.69
CPSF4-213ENST00000484112 GPR158Q5T848 1215 aa10.74□□□□□ -0.69
CPSF4-213ENST00000484112 C9orf57Q5W0N0 161 aa10.74□□□□□ -0.69
CPSF4-213ENST00000484112 C1orf228Q6PIY5 440 aa10.74□□□□□ -0.69
CPSF4-213ENST00000484112 FOXR2Q6PJQ5 311 aa10.74□□□□□ -0.69
CPSF4-213ENST00000484112 DNAJB7Q7Z6W7 309 aaPredicted RBP10.74□□□□□ -0.69
CPSF4-213ENST00000484112 RALGPS2Q86X27 583 aaPredicted RBP10.74□□□□□ -0.69
CPSF4-213ENST00000484112 TMC8Q8IU68 726 aa10.74□□□□□ -0.69
CPSF4-213ENST00000484112 LRRC52Q8N7C0 313 aa10.74□□□□□ -0.69
CPSF4-213ENST00000484112 C12orf50Q8NA57 414 aaPredicted RBP10.74□□□□□ -0.69
CPSF4-213ENST00000484112 ATAD1Q8NBU5 361 aa10.74□□□□□ -0.69
CPSF4-213ENST00000484112 SPATA18Q8TC71 538 aa10.74□□□□□ -0.69
CPSF4-213ENST00000484112 MSANTD3Q96H12 275 aa10.74□□□□□ -0.69
CPSF4-213ENST00000484112 ANKRD36BP1Q96IX9 119 aa10.74□□□□□ -0.69
CPSF4-213ENST00000484112 LRRC3BQ96PB8 259 aa10.74□□□□□ -0.69
CPSF4-213ENST00000484112 LRRC3Q9BY71 257 aa10.74□□□□□ -0.69
CPSF4-213ENST00000484112 DNAJC25Q9H1X3 360 aa10.74□□□□□ -0.69
CPSF4-213ENST00000484112 ARRDC1-AS1Q9H2J1 176 aa10.74□□□□□ -0.69
CPSF4-213ENST00000484112 IKZF4Q9H2S9 585 aa10.74□□□□□ -0.69
CPSF4-213ENST00000484112 PCIF1Q9H4Z3 704 aa10.74□□□□□ -0.69
CPSF4-213ENST00000484112 DMAC2Q9NW81 257 aa10.74□□□□□ -0.69
CPSF4-213ENST00000484112 R3HCC1Q9Y3T6 440 aaKnown RBP10.74□□□□□ -0.69
CPSF4-213ENST00000484112 SPTBN2O15020 2390 aa10.74□□□□□ -0.69
CPSF4-213ENST00000484112 F5P12259 2224 aa10.73□□□□□ -0.69
CPSF4-213ENST00000484112 ANK1P16157 1881 aa10.73□□□□□ -0.69
CPSF4-213ENST00000484112 GOLGA6L22H0YM25 854 aa10.73□□□□□ -0.69
CPSF4-213ENST00000484112 OAZ2O95190 189 aa10.73□□□□□ -0.69
CPSF4-213ENST00000484112 TMEM191BP0C7N4 346 aa10.73□□□□□ -0.69
CPSF4-213ENST00000484112 ODC1P11926 461 aa10.73□□□□□ -0.69
CPSF4-213ENST00000484112 GABRR2P28476 465 aa10.73□□□□□ -0.69
CPSF4-213ENST00000484112 TAF6P49848 677 aa10.73□□□□□ -0.69
CPSF4-213ENST00000484112 GUCY2FP51841 1108 aa10.73□□□□□ -0.69
CPSF4-213ENST00000484112 LILRA4P59901 499 aa10.73□□□□□ -0.69
CPSF4-213ENST00000484112 CLDN10P78369 228 aa10.73□□□□□ -0.69
CPSF4-213ENST00000484112 RBP5P82980 135 aa10.73□□□□□ -0.69
CPSF4-213ENST00000484112 TNK2Q07912 1038 aa10.73□□□□□ -0.69
CPSF4-213ENST00000484112 CYP24A1Q07973 514 aa10.73□□□□□ -0.69
CPSF4-213ENST00000484112 GPR17Q13304 367 aa10.73□□□□□ -0.69
CPSF4-213ENST00000484112 STIM1Q13586 685 aa10.73□□□□□ -0.69
CPSF4-213ENST00000484112 SF3A2Q15428 464 aaKnown RBP10.73□□□□□ -0.69
CPSF4-213ENST00000484112 DUOXA2Q1HG44 320 aa10.73□□□□□ -0.69
CPSF4-213ENST00000484112 SV2CQ496J9 727 aa10.73□□□□□ -0.69
CPSF4-213ENST00000484112 ARHGAP29Q52LW3 1261 aa10.73□□□□□ -0.69
CPSF4-213ENST00000484112 ARHGAP15Q53QZ3 475 aa10.73□□□□□ -0.69
CPSF4-213ENST00000484112 N4BP2L1Q5TBK1 243 aaPredicted RBP10.73□□□□□ -0.69
CPSF4-213ENST00000484112 CENPPQ6IPU0 288 aa10.73□□□□□ -0.69
CPSF4-213ENST00000484112 CBWD2Q8IUF1 395 aa10.73□□□□□ -0.69
CPSF4-213ENST00000484112 EFCAB13Q8IY85 973 aa10.73□□□□□ -0.69
CPSF4-213ENST00000484112 TRIML1Q8N9V2 468 aa10.73□□□□□ -0.69
CPSF4-213ENST00000484112 DDX1Q92499 740 aaKnown RBP10.73□□□□□ -0.69
CPSF4-213ENST00000484112 FNBP1Q96RU3 617 aa10.73□□□□□ -0.69
CPSF4-213ENST00000484112 TMEM209Q96SK2 561 aa10.73□□□□□ -0.69
CPSF4-213ENST00000484112 SMG9Q9H0W8 520 aaKnown RBP10.73□□□□□ -0.69
CPSF4-213ENST00000484112 INTS13Q9NVM9 706 aa10.73□□□□□ -0.69
CPSF4-213ENST00000484112 ANGPTL2Q9UKU9 493 aa10.73□□□□□ -0.69
CPSF4-213ENST00000484112 FRMD4BQ9Y2L6 1034 aa10.73□□□□□ -0.69
CPSF4-213ENST00000484112 PCDHA5Q9Y5H7 936 aa10.73□□□□□ -0.69
CPSF4-213ENST00000484112 COL4A2P08572 1712 aa10.72□□□□□ -0.69
CPSF4-213ENST00000484112 MTMR11A4FU01 709 aa10.72□□□□□ -0.69
CPSF4-213ENST00000484112 GOLGA8IPA6NC78 632 aa10.72□□□□□ -0.69
CPSF4-213ENST00000484112 OR6C75A6NL08 312 aa10.72□□□□□ -0.69
CPSF4-213ENST00000484112 GOLGA8JA6NMD2 632 aa10.72□□□□□ -0.69
CPSF4-213ENST00000484112 IKBKBO14920 756 aa10.72□□□□□ -0.69
CPSF4-213ENST00000484112 CLIC2O15247 247 aa10.72□□□□□ -0.69
CPSF4-213ENST00000484112 FOXD2O60548 495 aaPredicted RBP10.72□□□□□ -0.69
CPSF4-213ENST00000484112 GADD45BO75293 160 aaPredicted RBP10.72□□□□□ -0.69
CPSF4-213ENST00000484112 PAPSS2O95340 614 aaPredicted RBP10.72□□□□□ -0.69
CPSF4-213ENST00000484112 TNNC2P02585 160 aa10.72□□□□□ -0.69
CPSF4-213ENST00000484112 NR3C1P04150 777 aa10.72□□□□□ -0.69
CPSF4-213ENST00000484112 CYP11A1P05108 521 aa10.72□□□□□ -0.69
CPSF4-213ENST00000484112 FAM163BP0C2L3 166 aa10.72□□□□□ -0.69
CPSF4-213ENST00000484112 CCDC192P0DO97 292 aa10.72□□□□□ -0.69
CPSF4-213ENST00000484112 CYP2J2P51589 502 aa10.72□□□□□ -0.69
CPSF4-213ENST00000484112 MCCD1P59942 119 aaPredicted RBP10.72□□□□□ -0.69
CPSF4-213ENST00000484112 CYP4F8P98187 520 aa10.72□□□□□ -0.69
CPSF4-213ENST00000484112 TFAMQ00059 246 aaKnown RBP10.72□□□□□ -0.69
CPSF4-213ENST00000484112 LRRC63Q05C16 580 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms