RNA–Protein interactions for RNA: ENST00000483956.1

SEC61A1-205, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 1 (best)

Gene SEC61A1, Length 3,046 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-205ENST00000483956 RBM38Q9H0Z9 239 aaKnown RBP12.13□□□□□ -0.47
SEC61A1-205ENST00000483956 KCNQ5Q9NR82 932 aa12.13□□□□□ -0.47
SEC61A1-205ENST00000483956 HEY2Q9UBP5 337 aa12.13□□□□□ -0.47
SEC61A1-205ENST00000483956 HESX1Q9UBX0 185 aa12.13□□□□□ -0.47
SEC61A1-205ENST00000483956 ASIC3Q9UHC3 531 aa12.13□□□□□ -0.47
SEC61A1-205ENST00000483956 CHORDC1Q9UHD1 332 aaPredicted RBP12.13□□□□□ -0.47
SEC61A1-205ENST00000483956 FAF1Q9UNN5 650 aaPredicted RBP12.13□□□□□ -0.47
SEC61A1-205ENST00000483956 KLRG2A4D1S0 409 aaPredicted RBP12.13□□□□□ -0.47
SEC61A1-205ENST00000483956 EIF3FO00303 357 aaPredicted RBP12.13□□□□□ -0.47
SEC61A1-205ENST00000483956 BMP3P12645 472 aa12.13□□□□□ -0.47
SEC61A1-205ENST00000483956 UQCRBP14927 111 aa12.13□□□□□ -0.47
SEC61A1-205ENST00000483956 VCLP18206 1134 aa12.13□□□□□ -0.47
SEC61A1-205ENST00000483956 RPL5P46777 297 aaKnown RBP12.13□□□□□ -0.47
SEC61A1-205ENST00000483956 GCLMP48507 274 aa12.13□□□□□ -0.47
SEC61A1-205ENST00000483956 CHN2P52757 468 aa12.13□□□□□ -0.47
SEC61A1-205ENST00000483956 AQP4P55087 323 aa12.13□□□□□ -0.47
SEC61A1-205ENST00000483956 BTKQ06187 659 aa12.13□□□□□ -0.47
SEC61A1-205ENST00000483956 ASPHQ12797 758 aa12.13□□□□□ -0.47
SEC61A1-205ENST00000483956 PDK4Q16654 411 aa12.13□□□□□ -0.47
SEC61A1-205ENST00000483956 C3orf62Q6ZUJ4 267 aa12.13□□□□□ -0.47
SEC61A1-205ENST00000483956 LRRC6Q86X45 466 aa12.13□□□□□ -0.47
SEC61A1-205ENST00000483956 CPNE8Q86YQ8 564 aa12.13□□□□□ -0.47
SEC61A1-205ENST00000483956 PWWP2AQ96N64 755 aa12.13□□□□□ -0.47
SEC61A1-205ENST00000483956 TRAIPQ9BWF2 469 aa12.13□□□□□ -0.47
SEC61A1-205ENST00000483956 TSC22D4Q9Y3Q8 395 aa12.13□□□□□ -0.47
SEC61A1-205ENST00000483956 A0A0G2JND7 137 aa12.12□□□□□ -0.47
SEC61A1-205ENST00000483956 K7ENM7 598 aa12.12□□□□□ -0.47
SEC61A1-205ENST00000483956 THAP12O43422 761 aa12.12□□□□□ -0.47
SEC61A1-205ENST00000483956 ADAM23O75077 832 aa12.12□□□□□ -0.47
SEC61A1-205ENST00000483956 CDH16O75309 829 aa12.12□□□□□ -0.47
SEC61A1-205ENST00000483956 KRT38O76015 456 aa12.12□□□□□ -0.47
SEC61A1-205ENST00000483956 ESRRAP11474 423 aaPredicted RBP12.12□□□□□ -0.47
SEC61A1-205ENST00000483956 MXI1P50539 228 aa12.12□□□□□ -0.47
SEC61A1-205ENST00000483956 SNRPFP62306 86 aaKnown RBP12.12□□□□□ -0.47
SEC61A1-205ENST00000483956 IKQ13123 557 aaPredicted RBP12.12□□□□□ -0.47
SEC61A1-205ENST00000483956 MYLK3Q32MK0 819 aa12.12□□□□□ -0.47
SEC61A1-205ENST00000483956 LPCAT4Q643R3 524 aa12.12□□□□□ -0.47
SEC61A1-205ENST00000483956 UGT2A3Q6UWM9 527 aa12.12□□□□□ -0.47
SEC61A1-205ENST00000483956 BTBD6Q96KE9 485 aa12.12□□□□□ -0.47
SEC61A1-205ENST00000483956 KREMEN1Q96MU8 473 aa12.12□□□□□ -0.47
SEC61A1-205ENST00000483956 ZDHHC15Q96MV8 337 aa12.12□□□□□ -0.47
SEC61A1-205ENST00000483956 EURLQ9NYK6 297 aa12.12□□□□□ -0.47
SEC61A1-205ENST00000483956 SYNPO2Q9UMS6 1093 aa12.12□□□□□ -0.47
SEC61A1-205ENST00000483956 NRXN2Q9P2S2 1712 aa12.12□□□□□ -0.47
SEC61A1-205ENST00000483956 C15orf38-AP3S2A0A0A6YYH1 394 aa12.12□□□□□ -0.47
SEC61A1-205ENST00000483956 ARHGEF35A5YM69 484 aa12.12□□□□□ -0.47
SEC61A1-205ENST00000483956 CLPTM1O96005 669 aa12.12□□□□□ -0.47
SEC61A1-205ENST00000483956 SERPINB2P05120 415 aa12.12□□□□□ -0.47
SEC61A1-205ENST00000483956 TAL1P17542 331 aaPredicted RBP12.12□□□□□ -0.47
SEC61A1-205ENST00000483956 RGS9BPQ6ZS82 235 aa12.12□□□□□ -0.47
SEC61A1-205ENST00000483956 ARPINQ7Z6K5 226 aa12.12□□□□□ -0.47
SEC61A1-205ENST00000483956 SLC47A2Q86VL8 602 aa12.12□□□□□ -0.47
SEC61A1-205ENST00000483956 XXYLT1Q8NBI6 393 aa12.12□□□□□ -0.47
SEC61A1-205ENST00000483956 FBXO27Q8NI29 283 aa12.12□□□□□ -0.47
SEC61A1-205ENST00000483956 DENND1AQ8TEH3 1009 aa12.12□□□□□ -0.47
SEC61A1-205ENST00000483956 GIPC3Q8TF64 312 aa12.12□□□□□ -0.47
SEC61A1-205ENST00000483956 C1orf54Q8WWF1 131 aa12.12□□□□□ -0.47
SEC61A1-205ENST00000483956 KAT5Q92993 513 aa12.12□□□□□ -0.47
SEC61A1-205ENST00000483956 PPP1R10Q96QC0 940 aaKnown RBP12.12□□□□□ -0.47
SEC61A1-205ENST00000483956 ACCSQ96QU6 501 aa12.12□□□□□ -0.47
SEC61A1-205ENST00000483956 LXNQ9BS40 222 aa12.12□□□□□ -0.47
SEC61A1-205ENST00000483956 NINJ2Q9NZG7 142 aa12.12□□□□□ -0.47
SEC61A1-205ENST00000483956 SELENONQ9NZV5 590 aa12.12□□□□□ -0.47
SEC61A1-205ENST00000483956 FAM32AQ9Y421 112 aaKnown RBP12.12□□□□□ -0.47
SEC61A1-205ENST00000483956 SPO11Q9Y5K1 396 aa12.12□□□□□ -0.47
SEC61A1-205ENST00000483956 F8W8V4 182 aa12.11□□□□□ -0.47
SEC61A1-205ENST00000483956 RIMBP2O15034 1052 aa12.11□□□□□ -0.47
SEC61A1-205ENST00000483956 NPM3O75607 178 aaKnown RBP12.11□□□□□ -0.47
SEC61A1-205ENST00000483956 OXSR1O95747 527 aaPredicted RBP12.11□□□□□ -0.47
SEC61A1-205ENST00000483956 RARBP10826 455 aa12.11□□□□□ -0.47
SEC61A1-205ENST00000483956 ITGA8P53708 1063 aa12.11□□□□□ -0.47
SEC61A1-205ENST00000483956 MFAP3P55082 362 aa12.11□□□□□ -0.47
SEC61A1-205ENST00000483956 BCL2A1Q16548 175 aa12.11□□□□□ -0.47
SEC61A1-205ENST00000483956 MMEL1Q495T6 779 aa12.11□□□□□ -0.47
SEC61A1-205ENST00000483956 CEP55Q53EZ4 464 aa12.11□□□□□ -0.47
SEC61A1-205ENST00000483956 C6orf183Q5T699 404 aa12.11□□□□□ -0.47
SEC61A1-205ENST00000483956 FBXL19Q6PCT2 694 aa12.11□□□□□ -0.47
SEC61A1-205ENST00000483956 FAM196AQ6ZSG2 479 aa12.11□□□□□ -0.47
SEC61A1-205ENST00000483956 C14orf80Q86SX3 495 aa12.11□□□□□ -0.47
SEC61A1-205ENST00000483956 C8orf37Q96NL8 207 aa12.11□□□□□ -0.47
SEC61A1-205ENST00000483956 IDI2Q9BXS1 227 aa12.11□□□□□ -0.47
SEC61A1-205ENST00000483956 KLHL4Q9C0H6 718 aa12.11□□□□□ -0.47
SEC61A1-205ENST00000483956 TMEM117Q9H0C3 514 aa12.11□□□□□ -0.47
SEC61A1-205ENST00000483956 ZDHHC7Q9NXF8 308 aa12.11□□□□□ -0.47
SEC61A1-205ENST00000483956 TUBA8Q9NY65 449 aaPredicted RBP12.11□□□□□ -0.47
SEC61A1-205ENST00000483956 HBS1LQ9Y450 684 aaKnown RBP12.11□□□□□ -0.47
SEC61A1-205ENST00000483956 NUB1Q9Y5A7 615 aa12.11□□□□□ -0.47
SEC61A1-205ENST00000483956 FADS3Q9Y5Q0 445 aa12.11□□□□□ -0.47
SEC61A1-205ENST00000483956 UBR3Q6ZT12 1888 aa12.11□□□□□ -0.47
SEC61A1-205ENST00000483956 DDTLA6NHG4 134 aaPredicted RBP12.11□□□□□ -0.47
SEC61A1-205ENST00000483956 SMCHD1A6NHR9 2005 aa12.11□□□□□ -0.47
SEC61A1-205ENST00000483956 PPEF1O14829 653 aaPredicted RBP12.11□□□□□ -0.47
SEC61A1-205ENST00000483956 CYP26A1O43174 497 aa12.11□□□□□ -0.47
SEC61A1-205ENST00000483956 STRNO43815 780 aa12.11□□□□□ -0.47
SEC61A1-205ENST00000483956 ZBED4O75132 1171 aa12.11□□□□□ -0.47
SEC61A1-205ENST00000483956 TRMUO75648 421 aaKnown RBP12.11□□□□□ -0.47
SEC61A1-205ENST00000483956 TFPTP0C1Z6 253 aa12.11□□□□□ -0.47
SEC61A1-205ENST00000483956 ATP6V1B1P15313 513 aa12.11□□□□□ -0.47
SEC61A1-205ENST00000483956 ATF2P15336 505 aa12.11□□□□□ -0.47
SEC61A1-205ENST00000483956 CYP11B1P15538 503 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms