RNA–Protein interactions for RNA: ENST00000482659.2

SHANK2-216, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 3

Gene SHANK2, Length 381 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-216ENST00000482659 MED15Q96RN5 788 aa4.84□□□□□ -1.63
SHANK2-216ENST00000482659 SEPT5Q99719 369 aaPredicted RBP4.84□□□□□ -1.63
SHANK2-216ENST00000482659 RTP3Q9BQQ7 232 aa4.84□□□□□ -1.63
SHANK2-216ENST00000482659 MRPL45Q9BRJ2 306 aaKnown RBP4.84□□□□□ -1.63
SHANK2-216ENST00000482659 PI4K2AQ9BTU6 479 aa4.84□□□□□ -1.63
SHANK2-216ENST00000482659 FUCA2Q9BTY2 467 aa4.84□□□□□ -1.63
SHANK2-216ENST00000482659 UBXN6Q9BZV1 441 aa4.84□□□□□ -1.63
SHANK2-216ENST00000482659 INTS2Q9H0H0 1204 aaKnown RBP4.84□□□□□ -1.63
SHANK2-216ENST00000482659 WDR6Q9NNW5 1121 aaKnown RBP4.84□□□□□ -1.63
SHANK2-216ENST00000482659 PNPLA8Q9NP80 782 aa4.84□□□□□ -1.63
SHANK2-216ENST00000482659 AVENQ9NQS1 362 aaPredicted RBP4.84□□□□□ -1.63
SHANK2-216ENST00000482659 SAMSN1Q9NSI8 373 aaKnown RBP4.84□□□□□ -1.63
SHANK2-216ENST00000482659 COMMD8Q9NX08 183 aa4.84□□□□□ -1.63
SHANK2-216ENST00000482659 ABI2Q9NYB9 513 aaPredicted RBP4.84□□□□□ -1.63
SHANK2-216ENST00000482659 GCNT4Q9P109 453 aa4.84□□□□□ -1.63
SHANK2-216ENST00000482659 UXTQ9UBK9 157 aaPredicted RBP4.84□□□□□ -1.63
SHANK2-216ENST00000482659 APEX2Q9UBZ4 518 aa4.84□□□□□ -1.63
SHANK2-216ENST00000482659 LIMA1Q9UHB6 759 aaKnown RBP4.84□□□□□ -1.63
SHANK2-216ENST00000482659 POLIQ9UNA4 740 aa4.84□□□□□ -1.63
SHANK2-216ENST00000482659 SLC27A5Q9Y2P5 690 aa4.84□□□□□ -1.63
SHANK2-216ENST00000482659 USP15Q9Y4E8 981 aaPredicted RBP4.84□□□□□ -1.63
SHANK2-216ENST00000482659 INSL5Q9Y5Q6 135 aa4.84□□□□□ -1.63
SHANK2-216ENST00000482659 CILPO75339 1184 aa4.83□□□□□ -1.64
SHANK2-216ENST00000482659 RTN3O95197 1032 aaPredicted RBP4.83□□□□□ -1.64
SHANK2-216ENST00000482659 SEC24AO95486 1093 aa4.83□□□□□ -1.64
SHANK2-216ENST00000482659 OR4Q2P0C623 313 aa4.83□□□□□ -1.64
SHANK2-216ENST00000482659 FAM200BP0CF97 657 aa4.83□□□□□ -1.64
SHANK2-216ENST00000482659 ZNF18P17022 549 aa4.83□□□□□ -1.64
SHANK2-216ENST00000482659 PFKLP17858 780 aa4.83□□□□□ -1.64
SHANK2-216ENST00000482659 CD58P19256 250 aa4.83□□□□□ -1.64
SHANK2-216ENST00000482659 FSHRP23945 695 aa4.83□□□□□ -1.64
SHANK2-216ENST00000482659 DDX6P26196 483 aaKnown RBP eCLIP4.83□□□□□ -1.641e-5■■■□□ 17.8
SHANK2-216ENST00000482659 PON1P27169 355 aa4.83□□□□□ -1.64
SHANK2-216ENST00000482659 CDC25CP30307 473 aa4.83□□□□□ -1.64
SHANK2-216ENST00000482659 RBM10P98175 930 aaKnown RBP4.83□□□□□ -1.64
SHANK2-216ENST00000482659 TFF2Q03403 129 aa4.83□□□□□ -1.64
SHANK2-216ENST00000482659 PTK2Q05397 1052 aa4.83□□□□□ -1.64
SHANK2-216ENST00000482659 LRMPQ12912 555 aa4.83□□□□□ -1.64
SHANK2-216ENST00000482659 NCAPHQ15003 741 aa4.83□□□□□ -1.64
SHANK2-216ENST00000482659 ARHGAP15Q53QZ3 475 aa4.83□□□□□ -1.64
SHANK2-216ENST00000482659 MDH1BQ5I0G3 518 aa4.83□□□□□ -1.64
SHANK2-216ENST00000482659 ARHGAP17Q68EM7 881 aa4.83□□□□□ -1.64
SHANK2-216ENST00000482659 SPOPLQ6IQ16 392 aa4.83□□□□□ -1.64
SHANK2-216ENST00000482659 TRIM65Q6PJ69 517 aa4.83□□□□□ -1.64
SHANK2-216ENST00000482659 LRSAM1Q6UWE0 723 aa4.83□□□□□ -1.64
SHANK2-216ENST00000482659 SCARA5Q6ZMJ2 495 aa4.83□□□□□ -1.64
SHANK2-216ENST00000482659 C11orf57Q6ZUT1 292 aaPredicted RBP4.83□□□□□ -1.64
SHANK2-216ENST00000482659 GRASPQ7Z6J2 395 aaPredicted RBP4.83□□□□□ -1.64
SHANK2-216ENST00000482659 DNAJB7Q7Z6W7 309 aaPredicted RBP4.83□□□□□ -1.64
SHANK2-216ENST00000482659 ACOT1Q86TX2 421 aa4.83□□□□□ -1.64
SHANK2-216ENST00000482659 LRRTM3Q86VH5 581 aa4.83□□□□□ -1.64
SHANK2-216ENST00000482659 ADHFE1Q8IWW8 467 aa4.83□□□□□ -1.64
SHANK2-216ENST00000482659 ZDHHC14Q8IZN3 488 aa4.83□□□□□ -1.64
SHANK2-216ENST00000482659 AOPEPQ8N6M6 819 aa4.83□□□□□ -1.64
SHANK2-216ENST00000482659 C12orf76Q8N812 135 aaPredicted RBP4.83□□□□□ -1.64
SHANK2-216ENST00000482659 TDRD5Q8NAT2 981 aaKnown RBP4.83□□□□□ -1.64
SHANK2-216ENST00000482659 PDZD8Q8NEN9 1154 aa4.83□□□□□ -1.64
SHANK2-216ENST00000482659 LMO3Q8TAP4 145 aa4.83□□□□□ -1.64
SHANK2-216ENST00000482659 TATDN2Q93075 761 aa4.83□□□□□ -1.64
SHANK2-216ENST00000482659 ZDHHC16Q969W1 377 aa4.83□□□□□ -1.64
SHANK2-216ENST00000482659 E2F7Q96AV8 911 aa4.83□□□□□ -1.64
SHANK2-216ENST00000482659 IQCDQ96DY2 449 aa4.83□□□□□ -1.64
SHANK2-216ENST00000482659 SMARCD1Q96GM5 515 aa4.83□□□□□ -1.64
SHANK2-216ENST00000482659 MYRFLQ96LU7 910 aa4.83□□□□□ -1.64
SHANK2-216ENST00000482659 PCMTD1Q96MG8 357 aaPredicted RBP4.83□□□□□ -1.64
SHANK2-216ENST00000482659 SLITRK1Q96PX8 696 aa4.83□□□□□ -1.64
SHANK2-216ENST00000482659 PKMYT1Q99640 499 aa4.83□□□□□ -1.64
SHANK2-216ENST00000482659 HNRNPABQ99729 332 aaKnown RBP4.83□□□□□ -1.64
SHANK2-216ENST00000482659 CORO1BQ9BR76 489 aa4.83□□□□□ -1.64
SHANK2-216ENST00000482659 MED10Q9BTT4 135 aa4.83□□□□□ -1.64
SHANK2-216ENST00000482659 VPS16Q9H269 839 aa4.83□□□□□ -1.64
SHANK2-216ENST00000482659 TSPY26PQ9H489 355 aa4.83□□□□□ -1.64
SHANK2-216ENST00000482659 FBXO44Q9H4M3 255 aa4.83□□□□□ -1.64
SHANK2-216ENST00000482659 SMYD3Q9H7B4 428 aa4.83□□□□□ -1.64
SHANK2-216ENST00000482659 APOBEC3GQ9HC16 384 aaKnown RBP4.83□□□□□ -1.64
SHANK2-216ENST00000482659 CSNK1G1Q9HCP0 422 aa4.83□□□□□ -1.64
SHANK2-216ENST00000482659 UBE2TQ9NPD8 197 aaPredicted RBP4.83□□□□□ -1.64
SHANK2-216ENST00000482659 DMAP1Q9NPF5 467 aaPredicted RBP4.83□□□□□ -1.64
SHANK2-216ENST00000482659 PLCB1Q9NQ66 1216 aa4.83□□□□□ -1.64
SHANK2-216ENST00000482659 ASAH2Q9NR71 780 aa4.83□□□□□ -1.64
SHANK2-216ENST00000482659 TAB2Q9NYJ8 693 aa4.83□□□□□ -1.64
SHANK2-216ENST00000482659 GDE1Q9NZC3 331 aa4.83□□□□□ -1.64
SHANK2-216ENST00000482659 HESX1Q9UBX0 185 aa4.83□□□□□ -1.64
SHANK2-216ENST00000482659 CDH7Q9ULB5 785 aa4.83□□□□□ -1.64
SHANK2-216ENST00000482659 CNTN6Q9UQ52 1028 aa4.83□□□□□ -1.64
SHANK2-216ENST00000482659 MRPS23Q9Y3D9 190 aaKnown RBP4.83□□□□□ -1.64
SHANK2-216ENST00000482659 YIPF1Q9Y548 306 aa4.83□□□□□ -1.64
SHANK2-216ENST00000482659 PCDHB4Q9Y5E5 795 aa4.83□□□□□ -1.64
SHANK2-216ENST00000482659 ALPK3Q96L96 1907 aa4.82□□□□□ -1.64
SHANK2-216ENST00000482659 A0A1W2PQC6 194 aa4.82□□□□□ -1.64
SHANK2-216ENST00000482659 LGALS16A8MUM7 142 aa4.82□□□□□ -1.64
SHANK2-216ENST00000482659 CCL16O15467 120 aa4.82□□□□□ -1.64
SHANK2-216ENST00000482659 CBFA2T2O43439 604 aa4.82□□□□□ -1.64
SHANK2-216ENST00000482659 ATP2C2O75185 946 aa4.82□□□□□ -1.64
SHANK2-216ENST00000482659 RFPL2O75678 378 aa4.82□□□□□ -1.64
SHANK2-216ENST00000482659 AP1G2O75843 785 aa4.82□□□□□ -1.64
SHANK2-216ENST00000482659 NOL4O94818 638 aa4.82□□□□□ -1.64
SHANK2-216ENST00000482659 RHOP08100 348 aa4.82□□□□□ -1.64
SHANK2-216ENST00000482659 SETSIPP0DME0 302 aa4.82□□□□□ -1.64
SHANK2-216ENST00000482659 KRT5P13647 590 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms