RNA–Protein interactions for RNA: ENST00000482647.5

SEC13-217, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-217ENST00000482647 RNF135Q8IUD6 432 aa22.27■■□□□ 1.16
SEC13-217ENST00000482647 EHBP1Q8NDI1 1231 aa22.27■■□□□ 1.16
SEC13-217ENST00000482647 LPIN3Q9BQK8 851 aa22.27■■□□□ 1.16
SEC13-217ENST00000482647 NT5C1AQ9BXI3 368 aa22.27■■□□□ 1.16
SEC13-217ENST00000482647 NAT10Q9H0A0 1025 aaKnown RBP22.27■■□□□ 1.16
SEC13-217ENST00000482647 CUL9Q8IWT3 2517 aa22.26■■□□□ 1.15
SEC13-217ENST00000482647 MYL4P12829 197 aa22.26■■□□□ 1.15
SEC13-217ENST00000482647 BDNFP23560 247 aa22.26■■□□□ 1.15
SEC13-217ENST00000482647 TBXAS1P24557 533 aaPredicted RBP22.26■■□□□ 1.15
SEC13-217ENST00000482647 EPHA5P54756 1037 aa22.26■■□□□ 1.15
SEC13-217ENST00000482647 LRMPQ12912 555 aa22.26■■□□□ 1.15
SEC13-217ENST00000482647 CUL2Q13617 745 aa22.26■■□□□ 1.15
SEC13-217ENST00000482647 DDR2Q16832 855 aa22.26■■□□□ 1.15
SEC13-217ENST00000482647 C11orf57Q6ZUT1 292 aaPredicted RBP22.26■■□□□ 1.15
SEC13-217ENST00000482647 SCN4BQ8IWT1 228 aa22.26■■□□□ 1.15
SEC13-217ENST00000482647 HS6ST3Q8IZP7 471 aa22.26■■□□□ 1.15
SEC13-217ENST00000482647 ITFG1Q8TB96 612 aa22.26■■□□□ 1.15
SEC13-217ENST00000482647 GIPC2Q8TF65 315 aa22.26■■□□□ 1.15
SEC13-217ENST00000482647 FGF13Q92913 245 aa22.26■■□□□ 1.15
SEC13-217ENST00000482647 NT5C1BQ96P26 610 aa22.26■■□□□ 1.15
SEC13-217ENST00000482647 MYADMQ96S97 322 aa22.26■■□□□ 1.15
SEC13-217ENST00000482647 B3GNT5Q9BYG0 378 aa22.26■■□□□ 1.15
SEC13-217ENST00000482647 ELOVL4Q9GZR5 314 aa22.26■■□□□ 1.15
SEC13-217ENST00000482647 CISHQ9NSE2 258 aa22.26■■□□□ 1.15
SEC13-217ENST00000482647 SAMSN1Q9NSI8 373 aaKnown RBP22.26■■□□□ 1.15
SEC13-217ENST00000482647 EPS15L1Q9UBC2 864 aa22.26■■□□□ 1.15
SEC13-217ENST00000482647 LIMD1Q9UGP4 676 aa22.26■■□□□ 1.15
SEC13-217ENST00000482647 HMGXB4Q9UGU5 601 aa22.26■■□□□ 1.15
SEC13-217ENST00000482647 CDH7Q9ULB5 785 aa22.26■■□□□ 1.15
SEC13-217ENST00000482647 KCNJ18B7U540 433 aa22.25■■□□□ 1.15
SEC13-217ENST00000482647 CILPO75339 1184 aa22.25■■□□□ 1.15
SEC13-217ENST00000482647 FGF19O95750 216 aa22.25■■□□□ 1.15
SEC13-217ENST00000482647 LAMP2P13473 410 aa22.25■■□□□ 1.15
SEC13-217ENST00000482647 EEF1GP26641 437 aaKnown RBP22.25■■□□□ 1.15
SEC13-217ENST00000482647 GRIK1P39086 918 aa22.25■■□□□ 1.15
SEC13-217ENST00000482647 GPR15P49685 360 aa22.25■■□□□ 1.15
SEC13-217ENST00000482647 YWHAEP62258 255 aaKnown RBP22.25■■□□□ 1.15
SEC13-217ENST00000482647 ORC1Q13415 861 aa22.25■■□□□ 1.15
SEC13-217ENST00000482647 KCNJ12Q14500 433 aa22.25■■□□□ 1.15
SEC13-217ENST00000482647 MAN2A1Q16706 1144 aa22.25■■□□□ 1.15
SEC13-217ENST00000482647 SLC5A9Q2M3M2 681 aa22.25■■□□□ 1.15
SEC13-217ENST00000482647 HSP90AA4PQ58FG1 418 aa22.25■■□□□ 1.15
SEC13-217ENST00000482647 PRSS36Q5K4E3 855 aa22.25■■□□□ 1.15
SEC13-217ENST00000482647 LMO3Q8TAP4 145 aa22.25■■□□□ 1.15
SEC13-217ENST00000482647 GPR152Q8TDT2 470 aa22.25■■□□□ 1.15
SEC13-217ENST00000482647 ARID3AQ99856 593 aa22.25■■□□□ 1.15
SEC13-217ENST00000482647 TUBGCP2Q9BSJ2 902 aa22.25■■□□□ 1.15
SEC13-217ENST00000482647 ATP8B3O60423 1300 aa22.25■■□□□ 1.15
SEC13-217ENST00000482647 TRIM66O15016 1216 aa22.24■■□□□ 1.15
SEC13-217ENST00000482647 CSH1P0DML2 217 aa22.24■■□□□ 1.15
SEC13-217ENST00000482647 CSH2P0DML3 217 aa22.24■■□□□ 1.15
SEC13-217ENST00000482647 ANXA13P27216 316 aa22.24■■□□□ 1.15
SEC13-217ENST00000482647 TCP11X2Q5H9J9 407 aa22.24■■□□□ 1.15
SEC13-217ENST00000482647 CEP295NLQ96MC4 621 aa22.24■■□□□ 1.15
SEC13-217ENST00000482647 MED10Q9BTT4 135 aa22.24■■□□□ 1.15
SEC13-217ENST00000482647 LRRC3Q9BY71 257 aa22.24■■□□□ 1.15
SEC13-217ENST00000482647 INTS2Q9H0H0 1204 aaKnown RBP22.24■■□□□ 1.15
SEC13-217ENST00000482647 GDE1Q9NZC3 331 aa22.24■■□□□ 1.15
SEC13-217ENST00000482647 PRKCSHP14314 528 aaPredicted RBP22.23■■□□□ 1.15
SEC13-217ENST00000482647 CCR2P41597 374 aa22.23■■□□□ 1.15
SEC13-217ENST00000482647 MYL5Q02045 173 aa22.23■■□□□ 1.15
SEC13-217ENST00000482647 VWA3BQ502W6 1294 aa22.23■■□□□ 1.15
SEC13-217ENST00000482647 SDHAF4Q5VUM1 108 aa22.23■■□□□ 1.15
SEC13-217ENST00000482647 GBP6Q6ZN66 633 aa22.23■■□□□ 1.15
SEC13-217ENST00000482647 TMC8Q8IU68 726 aa22.23■■□□□ 1.15
SEC13-217ENST00000482647 NPAS3Q8IXF0 933 aa22.23■■□□□ 1.15
SEC13-217ENST00000482647 PPM1KQ8N3J5 372 aa22.23■■□□□ 1.15
SEC13-217ENST00000482647 WHAMMQ8TF30 809 aa22.23■■□□□ 1.15
SEC13-217ENST00000482647 TCEAL4Q96EI5 215 aa22.23■■□□□ 1.15
SEC13-217ENST00000482647 SPATA17Q96L03 361 aa22.23■■□□□ 1.15
SEC13-217ENST00000482647 C8orf48Q96LL4 319 aa22.23■■□□□ 1.15
SEC13-217ENST00000482647 TWNKQ96RR1 684 aa22.23■■□□□ 1.15
SEC13-217ENST00000482647 ZNF518BQ9C0D4 1074 aa22.23■■□□□ 1.15
SEC13-217ENST00000482647 GCNT4Q9P109 453 aa22.23■■□□□ 1.15
SEC13-217ENST00000482647 C2orf16Q68DN1 1984 aa22.22■■□□□ 1.15
SEC13-217ENST00000482647 GTPBP10A4D1E9 387 aaKnown RBP22.22■■□□□ 1.15
SEC13-217ENST00000482647 CLDN5O00501 218 aa22.22■■□□□ 1.15
SEC13-217ENST00000482647 ZNF394Q53GI3 561 aa22.22■■□□□ 1.15
SEC13-217ENST00000482647 C12orf29Q8N999 325 aa22.22■■□□□ 1.15
SEC13-217ENST00000482647 SLC2A14Q8TDB8 520 aa22.22■■□□□ 1.15
SEC13-217ENST00000482647 ING5Q8WYH8 240 aa22.22■■□□□ 1.15
SEC13-217ENST00000482647 TMEM176AQ96HP8 235 aa22.22■■□□□ 1.15
SEC13-217ENST00000482647 HEXIM2Q96MH2 286 aaKnown RBP22.22■■□□□ 1.15
SEC13-217ENST00000482647 NDST4Q9H3R1 872 aa22.22■■□□□ 1.15
SEC13-217ENST00000482647 ZNF334Q9HCZ1 680 aaPredicted RBP22.22■■□□□ 1.15
SEC13-217ENST00000482647 FANCLQ9NW38 375 aa22.22■■□□□ 1.15
SEC13-217ENST00000482647 IGSF9Q9P2J2 1179 aa22.22■■□□□ 1.15
SEC13-217ENST00000482647 SLC38A8A6NNN8 435 aa22.21■■□□□ 1.15
SEC13-217ENST00000482647 NOL4O94818 638 aa22.21■■□□□ 1.15
SEC13-217ENST00000482647 ALADP13716 330 aa22.21■■□□□ 1.15
SEC13-217ENST00000482647 HMGA1P17096 107 aaKnown RBP22.21■■□□□ 1.15
SEC13-217ENST00000482647 CEBPBP17676 345 aa22.21■■□□□ 1.15
SEC13-217ENST00000482647 GABRR2P28476 465 aa22.21■■□□□ 1.15
SEC13-217ENST00000482647 CDC25CP30307 473 aa22.21■■□□□ 1.15
SEC13-217ENST00000482647 GCNT1Q02742 428 aa22.21■■□□□ 1.15
SEC13-217ENST00000482647 EXOC3L4Q17RC7 722 aa22.21■■□□□ 1.15
SEC13-217ENST00000482647 ANO6Q4KMQ2 910 aa22.21■■□□□ 1.15
SEC13-217ENST00000482647 CDKAL1Q5VV42 579 aa22.21■■□□□ 1.15
SEC13-217ENST00000482647 PAQR9Q6ZVX9 377 aa22.21■■□□□ 1.15
SEC13-217ENST00000482647 FAM35AQ86V20 835 aa22.21■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms