RNA–Protein interactions for RNA: ENST00000482541.2

CCNC-204, Transcript of cyclin C, humanhuman

TSL 1 (best) BASIC

Gene CCNC, Length 1,704 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-204ENST00000482541 CDC25CP30307 473 aa8.32□□□□□ -1.08
CCNC-204ENST00000482541 GDI1P31150 447 aa8.32□□□□□ -1.08
CCNC-204ENST00000482541 VIPR2P41587 438 aa8.32□□□□□ -1.08
CCNC-204ENST00000482541 MYL7Q01449 175 aa8.32□□□□□ -1.08
CCNC-204ENST00000482541 VAC14Q08AM6 782 aa8.32□□□□□ -1.08
CCNC-204ENST00000482541 FCHO2Q0JRZ9 810 aa8.32□□□□□ -1.08
CCNC-204ENST00000482541 PSMD2Q13200 908 aa8.32□□□□□ -1.08
CCNC-204ENST00000482541 TAF12Q16514 161 aa8.32□□□□□ -1.08
CCNC-204ENST00000482541 ARHGAP15Q53QZ3 475 aa8.32□□□□□ -1.08
CCNC-204ENST00000482541 C1orf228Q6PIY5 440 aa8.32□□□□□ -1.08
CCNC-204ENST00000482541 TPRG1Q6ZUI0 275 aa8.32□□□□□ -1.08
CCNC-204ENST00000482541 HS2ST1Q7LGA3 356 aa8.32□□□□□ -1.08
CCNC-204ENST00000482541 CBWD2Q8IUF1 395 aa8.32□□□□□ -1.08
CCNC-204ENST00000482541 WDR49Q8IV35 697 aa8.32□□□□□ -1.08
CCNC-204ENST00000482541 ARID3BQ8IVW6 561 aaPredicted RBP8.32□□□□□ -1.08
CCNC-204ENST00000482541 CEP57L1Q8IYX8 460 aa8.32□□□□□ -1.08
CCNC-204ENST00000482541 FAM200AQ8TCP9 573 aa8.32□□□□□ -1.08
CCNC-204ENST00000482541 SCFD1Q8WVM8 642 aa8.32□□□□□ -1.08
CCNC-204ENST00000482541 NKD2Q969F2 451 aaPredicted RBP8.32□□□□□ -1.08
CCNC-204ENST00000482541 CLDN23Q96B33 292 aa8.32□□□□□ -1.08
CCNC-204ENST00000482541 KCTD12Q96CX2 325 aaKnown RBP8.32□□□□□ -1.08
CCNC-204ENST00000482541 SEPT5Q99719 369 aaPredicted RBP8.32□□□□□ -1.08
CCNC-204ENST00000482541 MTMR12Q9C0I1 747 aa8.32□□□□□ -1.08
CCNC-204ENST00000482541 ABCB6Q9NP58 842 aa8.32□□□□□ -1.08
CCNC-204ENST00000482541 AGPAT3Q9NRZ7 376 aa8.32□□□□□ -1.08
CCNC-204ENST00000482541 DDX43Q9NXZ2 648 aaKnown RBP8.32□□□□□ -1.08
CCNC-204ENST00000482541 SIX4Q9UIU6 781 aa8.32□□□□□ -1.08
CCNC-204ENST00000482541 L1RE1Q9UN81 338 aa8.32□□□□□ -1.08
CCNC-204ENST00000482541 MTF2Q9Y483 593 aaPredicted RBP8.32□□□□□ -1.08
CCNC-204ENST00000482541 SNX9Q9Y5X1 595 aa8.32□□□□□ -1.08
CCNC-204ENST00000482541 SHISA7A6NL88 538 aa8.32□□□□□ -1.08
CCNC-204ENST00000482541 CHADO15335 359 aa8.32□□□□□ -1.08
CCNC-204ENST00000482541 LRRN2O75325 713 aa8.32□□□□□ -1.08
CCNC-204ENST00000482541 SOAT2O75908 522 aa8.32□□□□□ -1.08
CCNC-204ENST00000482541 MYL1P05976 194 aa8.32□□□□□ -1.08
CCNC-204ENST00000482541 CSH1P0DML2 217 aa8.32□□□□□ -1.08
CCNC-204ENST00000482541 CSH2P0DML3 217 aa8.32□□□□□ -1.08
CCNC-204ENST00000482541 CD72P21854 359 aa8.32□□□□□ -1.08
CCNC-204ENST00000482541 CMA1P23946 247 aa8.32□□□□□ -1.08
CCNC-204ENST00000482541 PCSK1P29120 753 aa8.32□□□□□ -1.08
CCNC-204ENST00000482541 AFMP43652 599 aa8.32□□□□□ -1.08
CCNC-204ENST00000482541 RPL10AP62906 217 aaKnown RBP8.32□□□□□ -1.08
CCNC-204ENST00000482541 BFSP1Q12934 665 aa8.32□□□□□ -1.08
CCNC-204ENST00000482541 FZD5Q13467 585 aa8.32□□□□□ -1.08
CCNC-204ENST00000482541 GRM2Q14416 872 aa8.32□□□□□ -1.08
CCNC-204ENST00000482541 SNRNP35Q16560 246 aaKnown RBP8.32□□□□□ -1.08
CCNC-204ENST00000482541 KNOP1Q1ED39 458 aaKnown RBP8.32□□□□□ -1.08
CCNC-204ENST00000482541 BMT2Q1RMZ1 405 aa8.32□□□□□ -1.08
CCNC-204ENST00000482541 SOWAHAQ2M3V2 549 aa8.32□□□□□ -1.08
CCNC-204ENST00000482541 INTS6LQ5JSJ4 861 aaKnown RBP8.32□□□□□ -1.08
CCNC-204ENST00000482541 GPR158Q5T848 1215 aa8.32□□□□□ -1.08
CCNC-204ENST00000482541 ZC3H14Q6PJT7 736 aaKnown RBP8.32□□□□□ -1.08
CCNC-204ENST00000482541 LIMS2Q7Z4I7 341 aa8.32□□□□□ -1.08
CCNC-204ENST00000482541 FRMD5Q7Z6J6 570 aa8.32□□□□□ -1.08
CCNC-204ENST00000482541 C12orf56Q8IXR9 622 aa8.32□□□□□ -1.08
CCNC-204ENST00000482541 YAF2Q8IY57 180 aa8.32□□□□□ -1.08
CCNC-204ENST00000482541 XXYLT1Q8NBI6 393 aa8.32□□□□□ -1.08
CCNC-204ENST00000482541 TMEM174Q8WUU8 243 aa8.32□□□□□ -1.08
CCNC-204ENST00000482541 MSANTD3Q96H12 275 aa8.32□□□□□ -1.08
CCNC-204ENST00000482541 HPDLQ96IR7 371 aa8.32□□□□□ -1.08
CCNC-204ENST00000482541 FNBP1Q96RU3 617 aa8.32□□□□□ -1.08
CCNC-204ENST00000482541 LPIN3Q9BQK8 851 aa8.32□□□□□ -1.08
CCNC-204ENST00000482541 MKNK1Q9BUB5 465 aa8.32□□□□□ -1.08
CCNC-204ENST00000482541 BLZF1Q9H2G9 400 aa8.32□□□□□ -1.08
CCNC-204ENST00000482541 TASP1Q9H6P5 420 aa8.32□□□□□ -1.08
CCNC-204ENST00000482541 IL21Q9HBE4 155 aa8.32□□□□□ -1.08
CCNC-204ENST00000482541 SLC39A2Q9NP94 309 aa8.32□□□□□ -1.08
CCNC-204ENST00000482541 ABI2Q9NYB9 513 aaPredicted RBP8.32□□□□□ -1.08
CCNC-204ENST00000482541 USP25Q9UHP3 1055 aa8.32□□□□□ -1.08
CCNC-204ENST00000482541 GTF3C4Q9UKN8 822 aa8.32□□□□□ -1.08
CCNC-204ENST00000482541 FBXO4Q9UKT5 387 aa8.32□□□□□ -1.08
CCNC-204ENST00000482541 MIA3Q5JRA6 1907 aa8.31□□□□□ -1.08
CCNC-204ENST00000482541 PRR23AA6NEV1 266 aa8.31□□□□□ -1.08
CCNC-204ENST00000482541 ARNTLO00327 626 aa8.31□□□□□ -1.08
CCNC-204ENST00000482541 CLIC2O15247 247 aa8.31□□□□□ -1.08
CCNC-204ENST00000482541 LAMTOR5O43504 91 aa8.31□□□□□ -1.08
CCNC-204ENST00000482541 CST3P01034 146 aaPredicted RBP8.31□□□□□ -1.08
CCNC-204ENST00000482541 F11P03951 625 aa8.31□□□□□ -1.08
CCNC-204ENST00000482541 SP9P0CG40 484 aa8.31□□□□□ -1.08
CCNC-204ENST00000482541 TNNI1P19237 187 aa8.31□□□□□ -1.08
CCNC-204ENST00000482541 DDX6P26196 483 aaKnown RBP eCLIP8.31□□□□□ -1.08
CCNC-204ENST00000482541 TARSP26639 723 aaKnown RBP8.31□□□□□ -1.08
CCNC-204ENST00000482541 CASP1P29466 404 aa8.31□□□□□ -1.08
CCNC-204ENST00000482541 COPS2P61201 443 aa8.31□□□□□ -1.08
CCNC-204ENST00000482541 KRT85P78386 507 aa8.31□□□□□ -1.08
CCNC-204ENST00000482541 CUL4BQ13620 913 aa8.31□□□□□ -1.08
CCNC-204ENST00000482541 PSMD6Q15008 389 aa8.31□□□□□ -1.08
CCNC-204ENST00000482541 MAPRE1Q15691 268 aaKnown RBP8.31□□□□□ -1.08
CCNC-204ENST00000482541 ZNF528Q3MIS6 628 aa8.31□□□□□ -1.08
CCNC-204ENST00000482541 CFAP221Q4G0U5 840 aa8.31□□□□□ -1.08
CCNC-204ENST00000482541 ARHGAP29Q52LW3 1261 aa8.31□□□□□ -1.08
CCNC-204ENST00000482541 SCARA3Q6AZY7 606 aa8.31□□□□□ -1.08
CCNC-204ENST00000482541 FAM171BQ6P995 826 aa8.31□□□□□ -1.08
CCNC-204ENST00000482541 ASCL5Q7RTU5 278 aa8.31□□□□□ -1.08
CCNC-204ENST00000482541 TRAPPC11Q7Z392 1133 aa8.31□□□□□ -1.08
CCNC-204ENST00000482541 NELFCDQ8IXH7 590 aa8.31□□□□□ -1.08
CCNC-204ENST00000482541 ADGRF2Q8IZF7 708 aa8.31□□□□□ -1.08
CCNC-204ENST00000482541 OR5B17Q8NGF7 314 aa8.31□□□□□ -1.08
CCNC-204ENST00000482541 GOLGA5Q8TBA6 731 aa8.31□□□□□ -1.08
CCNC-204ENST00000482541 CSGALNACT1Q8TDX6 532 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms