RNA–Protein interactions for RNA: ENST00000482519.1

VAMP4-204, Transcript of vesicle associated membrane protein 4, humanhuman

TSL 3

Gene VAMP4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-204ENST00000482519 CETN3O15182 167 aa17.68■□□□□ 0.42
VAMP4-204ENST00000482519 MAPK13O15264 365 aa17.68■□□□□ 0.42
VAMP4-204ENST00000482519 PI15O43692 258 aa17.68■□□□□ 0.42
VAMP4-204ENST00000482519 P4HA1P13674 534 aa17.68■□□□□ 0.42
VAMP4-204ENST00000482519 PTPN1P18031 435 aaKnown RBP17.68■□□□□ 0.42
VAMP4-204ENST00000482519 BDNFP23560 247 aa17.68■□□□□ 0.42
VAMP4-204ENST00000482519 CDC25CP30307 473 aa17.68■□□□□ 0.42
VAMP4-204ENST00000482519 GRIK1P39086 918 aa17.68■□□□□ 0.42
VAMP4-204ENST00000482519 PFKPQ01813 784 aa17.68■□□□□ 0.42
VAMP4-204ENST00000482519 EDRF1Q3B7T1 1238 aa17.68■□□□□ 0.42
VAMP4-204ENST00000482519 CFAP221Q4G0U5 840 aa17.68■□□□□ 0.42
VAMP4-204ENST00000482519 SLC44A4Q53GD3 710 aa17.68■□□□□ 0.42
VAMP4-204ENST00000482519 CWF19L1Q69YN2 538 aaKnown RBP17.68■□□□□ 0.42
VAMP4-204ENST00000482519 SPATA20Q8TB22 786 aa17.68■□□□□ 0.42
VAMP4-204ENST00000482519 MYCBPAPQ8TBZ2 947 aa17.68■□□□□ 0.42
VAMP4-204ENST00000482519 FUBP3Q96I24 572 aaKnown RBP eCLIP17.68■□□□□ 0.42
VAMP4-204ENST00000482519 KCNH6Q9H252 994 aa17.68■□□□□ 0.42
VAMP4-204ENST00000482519 BRD9Q9H8M2 597 aa17.68■□□□□ 0.42
VAMP4-204ENST00000482519 IL21Q9HBE4 155 aa17.68■□□□□ 0.42
VAMP4-204ENST00000482519 NME7Q9Y5B8 376 aa17.68■□□□□ 0.42
VAMP4-204ENST00000482519 SLC38A8A6NNN8 435 aa17.67■□□□□ 0.42
VAMP4-204ENST00000482519 HEPACAM2A8MVW5 462 aa17.67■□□□□ 0.42
VAMP4-204ENST00000482519 DPYSL4O14531 572 aa17.67■□□□□ 0.42
VAMP4-204ENST00000482519 HLA-DRAP01903 254 aa17.67■□□□□ 0.42
VAMP4-204ENST00000482519 FAM163BP0C2L3 166 aa17.67■□□□□ 0.42
VAMP4-204ENST00000482519 CSH1P0DML2 217 aa17.67■□□□□ 0.42
VAMP4-204ENST00000482519 CSH2P0DML3 217 aa17.67■□□□□ 0.42
VAMP4-204ENST00000482519 EPB41P11171 864 aaKnown RBP17.67■□□□□ 0.42
VAMP4-204ENST00000482519 HMGA1P17096 107 aaKnown RBP17.67■□□□□ 0.42
VAMP4-204ENST00000482519 PSMC3P17980 439 aa17.67■□□□□ 0.42
VAMP4-204ENST00000482519 GDI1P31150 447 aa17.67■□□□□ 0.42
VAMP4-204ENST00000482519 PPP3CAQ08209 521 aa17.67■□□□□ 0.42
VAMP4-204ENST00000482519 STIM1Q13586 685 aa17.67■□□□□ 0.42
VAMP4-204ENST00000482519 ANKRD40Q6AI12 368 aa17.67■□□□□ 0.42
VAMP4-204ENST00000482519 SPOPLQ6IQ16 392 aa17.67■□□□□ 0.42
VAMP4-204ENST00000482519 VITQ6UXI7 678 aa17.67■□□□□ 0.42
VAMP4-204ENST00000482519 ARID3BQ8IVW6 561 aaPredicted RBP17.67■□□□□ 0.42
VAMP4-204ENST00000482519 YAF2Q8IY57 180 aa17.67■□□□□ 0.42
VAMP4-204ENST00000482519 PRSS33Q8NF86 280 aa17.67■□□□□ 0.42
VAMP4-204ENST00000482519 PCED1BQ96HM7 432 aa17.67■□□□□ 0.42
VAMP4-204ENST00000482519 SHDQ96IW2 340 aa17.67■□□□□ 0.42
VAMP4-204ENST00000482519 MAN1B1Q9UKM7 699 aa17.67■□□□□ 0.42
VAMP4-204ENST00000482519 TRIM49BA6NDI0 452 aa17.66■□□□□ 0.42
VAMP4-204ENST00000482519 BIN1O00499 593 aa17.66■□□□□ 0.42
VAMP4-204ENST00000482519 AOC1P19801 751 aa17.66■□□□□ 0.42
VAMP4-204ENST00000482519 ANXA13P27216 316 aa17.66■□□□□ 0.42
VAMP4-204ENST00000482519 PLA2G5P39877 138 aa17.66■□□□□ 0.42
VAMP4-204ENST00000482519 PMS1P54277 932 aaKnown RBP17.66■□□□□ 0.42
VAMP4-204ENST00000482519 NLRP12P59046 1061 aa17.66■□□□□ 0.42
VAMP4-204ENST00000482519 MLF2Q15773 248 aaPredicted RBP17.66■□□□□ 0.42
VAMP4-204ENST00000482519 ADSSL1Q8N142 457 aa17.66■□□□□ 0.42
VAMP4-204ENST00000482519 B3GALNT2Q8NCR0 500 aa17.66■□□□□ 0.42
VAMP4-204ENST00000482519 TAS1R2Q8TE23 839 aa17.66■□□□□ 0.42
VAMP4-204ENST00000482519 TAF4BQ92750 862 aa17.66■□□□□ 0.42
VAMP4-204ENST00000482519 PRRX2Q99811 253 aa17.66■□□□□ 0.42
VAMP4-204ENST00000482519 GTPBP4Q9BZE4 634 aaKnown RBP17.66■□□□□ 0.42
VAMP4-204ENST00000482519 IMPG2Q9BZV3 1241 aa17.66■□□□□ 0.42
VAMP4-204ENST00000482519 SMG9Q9H0W8 520 aaKnown RBP17.66■□□□□ 0.42
VAMP4-204ENST00000482519 SDCBP2Q9H190 292 aa17.66■□□□□ 0.42
VAMP4-204ENST00000482519 TASP1Q9H6P5 420 aa17.66■□□□□ 0.42
VAMP4-204ENST00000482519 VRTNQ9H8Y1 702 aa17.66■□□□□ 0.42
VAMP4-204ENST00000482519 TRPV4Q9HBA0 871 aa17.66■□□□□ 0.42
VAMP4-204ENST00000482519 PSMA7O14818 248 aa17.65■□□□□ 0.42
VAMP4-204ENST00000482519 ZNF263O14978 683 aa17.65■□□□□ 0.42
VAMP4-204ENST00000482519 CD72P21854 359 aa17.65■□□□□ 0.42
VAMP4-204ENST00000482519 MAGEA11P43364 429 aa17.65■□□□□ 0.42
VAMP4-204ENST00000482519 ORC1Q13415 861 aa17.65■□□□□ 0.42
VAMP4-204ENST00000482519 COBLL1Q53SF7 1204 aa17.65■□□□□ 0.42
VAMP4-204ENST00000482519 TCERG1LQ5VWI1 586 aa17.65■□□□□ 0.42
VAMP4-204ENST00000482519 KLHL10Q6JEL2 608 aa17.65■□□□□ 0.42
VAMP4-204ENST00000482519 VSTM1Q6UX27 236 aa17.65■□□□□ 0.42
VAMP4-204ENST00000482519 ELOA2Q8IYF1 753 aaPredicted RBP17.65■□□□□ 0.42
VAMP4-204ENST00000482519 MAB21L3Q8N8X9 362 aa17.65■□□□□ 0.42
VAMP4-204ENST00000482519 CCDC150Q8NCX0 1101 aa17.65■□□□□ 0.42
VAMP4-204ENST00000482519 E2F7Q96AV8 911 aa17.65■□□□□ 0.42
VAMP4-204ENST00000482519 RSPRY1Q96DX4 576 aa17.65■□□□□ 0.42
VAMP4-204ENST00000482519 MED10Q9BTT4 135 aa17.65■□□□□ 0.42
VAMP4-204ENST00000482519 MKNK1Q9BUB5 465 aa17.65■□□□□ 0.42
VAMP4-204ENST00000482519 SLC46A2Q9BY10 475 aa17.65■□□□□ 0.42
VAMP4-204ENST00000482519 FOXQ1Q9C009 403 aa17.65■□□□□ 0.42
VAMP4-204ENST00000482519 HEBP1Q9NRV9 189 aa17.65■□□□□ 0.42
VAMP4-204ENST00000482519 SIT1Q9Y3P8 196 aa17.65■□□□□ 0.42
VAMP4-204ENST00000482519 COL4A3Q01955 1670 aa17.64■□□□□ 0.42
VAMP4-204ENST00000482519 CLDN5O00501 218 aa17.64■□□□□ 0.41
VAMP4-204ENST00000482519 NOL4O94818 638 aa17.64■□□□□ 0.41
VAMP4-204ENST00000482519 PRAMEF12O95522 483 aa17.64■□□□□ 0.41
VAMP4-204ENST00000482519 ASS1P00966 412 aaKnown RBP17.64■□□□□ 0.41
VAMP4-204ENST00000482519 F11P03951 625 aa17.64■□□□□ 0.41
VAMP4-204ENST00000482519 DCNP07585 359 aaKnown RBP17.64■□□□□ 0.41
VAMP4-204ENST00000482519 AVPR1AP37288 418 aa17.64■□□□□ 0.41
VAMP4-204ENST00000482519 PTPN5P54829 565 aa17.64■□□□□ 0.41
VAMP4-204ENST00000482519 UBE2HP62256 183 aa17.64■□□□□ 0.41
VAMP4-204ENST00000482519 FKBP3Q00688 224 aaKnown RBP17.64■□□□□ 0.41
VAMP4-204ENST00000482519 UBXN2BQ14CS0 331 aa17.64■□□□□ 0.41
VAMP4-204ENST00000482519 CAMK4Q16566 473 aa17.64■□□□□ 0.41
VAMP4-204ENST00000482519 DCAF17Q5H9S7 520 aaPredicted RBP17.64■□□□□ 0.41
VAMP4-204ENST00000482519 TXNDC8Q6A555 127 aa17.64■□□□□ 0.41
VAMP4-204ENST00000482519 TPRG1Q6ZUI0 275 aa17.64■□□□□ 0.41
VAMP4-204ENST00000482519 TMEM150AQ86TG1 271 aa17.64■□□□□ 0.41
VAMP4-204ENST00000482519 ACOT1Q86TX2 421 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms