RNA–Protein interactions for RNA: ENST00000482236.5

SORT1-204, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 615 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-204ENST00000482236 ARHGAP29Q52LW3 1261 aa11.99□□□□□ -0.49
SORT1-204ENST00000482236 FRMD5Q7Z6J6 570 aa11.99□□□□□ -0.49
SORT1-204ENST00000482236 MFSD6LQ8IWD5 586 aa11.99□□□□□ -0.49
SORT1-204ENST00000482236 CELF5Q8N6W0 485 aaKnown RBP11.99□□□□□ -0.49
SORT1-204ENST00000482236 BPIFB1Q8TDL5 484 aa11.99□□□□□ -0.49
SORT1-204ENST00000482236 FAM3CQ92520 227 aa11.99□□□□□ -0.49
SORT1-204ENST00000482236 NKD2Q969F2 451 aaPredicted RBP11.99□□□□□ -0.49
SORT1-204ENST00000482236 BORCS6Q96GS4 357 aa11.99□□□□□ -0.49
SORT1-204ENST00000482236 FUBP3Q96I24 572 aaKnown RBP eCLIP11.99□□□□□ -0.49
SORT1-204ENST00000482236 NELL2Q99435 816 aa11.99□□□□□ -0.49
SORT1-204ENST00000482236 SMG9Q9H0W8 520 aaKnown RBP11.99□□□□□ -0.49
SORT1-204ENST00000482236 GOLPH3LQ9H4A5 285 aa11.99□□□□□ -0.49
SORT1-204ENST00000482236 LTB4R2Q9NPC1 389 aa11.99□□□□□ -0.49
SORT1-204ENST00000482236 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.99□□□□□ -0.492e-8■■■■■ 155.6
SORT1-204ENST00000482236 KMT2EQ8IZD2 1858 aa11.99□□□□□ -0.49
SORT1-204ENST00000482236 ANK1P16157 1881 aa11.98□□□□□ -0.49
SORT1-204ENST00000482236 MYBPHLA2RUH7 354 aa11.98□□□□□ -0.49
SORT1-204ENST00000482236 LRRIQ3A6PVS8 624 aaPredicted RBP11.98□□□□□ -0.49
SORT1-204ENST00000482236 HCRTO43612 131 aa11.98□□□□□ -0.49
SORT1-204ENST00000482236 KLRC4O43908 158 aa11.98□□□□□ -0.49
SORT1-204ENST00000482236 KINO60870 393 aaKnown RBP11.98□□□□□ -0.49
SORT1-204ENST00000482236 ATP2C2O75185 946 aa11.98□□□□□ -0.49
SORT1-204ENST00000482236 EPB41P11171 864 aaKnown RBP11.98□□□□□ -0.49
SORT1-204ENST00000482236 HOXD11P31277 338 aaPredicted RBP11.98□□□□□ -0.49
SORT1-204ENST00000482236 MAGEA9P43362 315 aa11.98□□□□□ -0.49
SORT1-204ENST00000482236 PDE6CP51160 858 aa11.98□□□□□ -0.49
SORT1-204ENST00000482236 VAMP7P51809 220 aa11.98□□□□□ -0.49
SORT1-204ENST00000482236 STARD6P59095 220 aa11.98□□□□□ -0.49
SORT1-204ENST00000482236 PLCB2Q00722 1185 aa11.98□□□□□ -0.49
SORT1-204ENST00000482236 LRRC32Q14392 662 aa11.98□□□□□ -0.49
SORT1-204ENST00000482236 GAREM2Q75VX8 874 aa11.98□□□□□ -0.49
SORT1-204ENST00000482236 FAM186BQ8IYM0 893 aa11.98□□□□□ -0.49
SORT1-204ENST00000482236 SMARCE1Q969G3 411 aa11.98□□□□□ -0.49
SORT1-204ENST00000482236 EXOC4Q96A65 974 aa11.98□□□□□ -0.49
SORT1-204ENST00000482236 TNIP3Q96KP6 325 aa11.98□□□□□ -0.49
SORT1-204ENST00000482236 PHOX2BQ99453 314 aa11.98□□□□□ -0.49
SORT1-204ENST00000482236 MRPL45Q9BRJ2 306 aaKnown RBP11.98□□□□□ -0.49
SORT1-204ENST00000482236 ELOVL4Q9GZR5 314 aa11.98□□□□□ -0.49
SORT1-204ENST00000482236 NACA2Q9H009 215 aa11.98□□□□□ -0.49
SORT1-204ENST00000482236 SMYD3Q9H7B4 428 aa11.98□□□□□ -0.49
SORT1-204ENST00000482236 DOCK8Q8NF50 2099 aa11.98□□□□□ -0.49
SORT1-204ENST00000482236 ZNF318Q5VUA4 2279 aa11.97□□□□□ -0.49
SORT1-204ENST00000482236 CHADO15335 359 aa11.97□□□□□ -0.49
SORT1-204ENST00000482236 STX10O60499 249 aa11.97□□□□□ -0.49
SORT1-204ENST00000482236 LRRN2O75325 713 aa11.97□□□□□ -0.49
SORT1-204ENST00000482236 MOSPD3O75425 235 aa11.97□□□□□ -0.49
SORT1-204ENST00000482236 RHOBTB3O94955 611 aa11.97□□□□□ -0.49
SORT1-204ENST00000482236 CCNE1P24864 410 aa11.97□□□□□ -0.49
SORT1-204ENST00000482236 PSMC2P35998 433 aaKnown RBP11.97□□□□□ -0.49
SORT1-204ENST00000482236 RAP1GAPP47736 663 aa11.97□□□□□ -0.49
SORT1-204ENST00000482236 IFNAR2P48551 515 aa11.97□□□□□ -0.49
SORT1-204ENST00000482236 NLRP12P59046 1061 aa11.97□□□□□ -0.49
SORT1-204ENST00000482236 CSTF1Q05048 431 aaKnown RBP11.97□□□□□ -0.49
SORT1-204ENST00000482236 DPYDQ12882 1025 aa11.97□□□□□ -0.49
SORT1-204ENST00000482236 ADAM9Q13443 819 aa11.97□□□□□ -0.49
SORT1-204ENST00000482236 PNOCQ13519 176 aa11.97□□□□□ -0.49
SORT1-204ENST00000482236 CCDC142Q17RM4 750 aa11.97□□□□□ -0.49
SORT1-204ENST00000482236 CFAP221Q4G0U5 840 aa11.97□□□□□ -0.49
SORT1-204ENST00000482236 DCAF17Q5H9S7 520 aaPredicted RBP11.97□□□□□ -0.49
SORT1-204ENST00000482236 TCERG1LQ5VWI1 586 aa11.97□□□□□ -0.49
SORT1-204ENST00000482236 TDRD10Q5VZ19 366 aaKnown RBP11.97□□□□□ -0.49
SORT1-204ENST00000482236 TXNDC8Q6A555 127 aa11.97□□□□□ -0.49
SORT1-204ENST00000482236 C1orf228Q6PIY5 440 aa11.97□□□□□ -0.49
SORT1-204ENST00000482236 VSTM1Q6UX27 236 aa11.97□□□□□ -0.49
SORT1-204ENST00000482236 INTS8Q75QN2 995 aaKnown RBP11.97□□□□□ -0.49
SORT1-204ENST00000482236 C1orf210Q8IVY1 113 aa11.97□□□□□ -0.49
SORT1-204ENST00000482236 CMTM8Q8IZV2 173 aa11.97□□□□□ -0.49
SORT1-204ENST00000482236 MYCBPAPQ8TBZ2 947 aa11.97□□□□□ -0.49
SORT1-204ENST00000482236 KBTBD7Q8WVZ9 684 aa11.97□□□□□ -0.49
SORT1-204ENST00000482236 MSANTD3Q96H12 275 aa11.97□□□□□ -0.49
SORT1-204ENST00000482236 ZFYVE19Q96K21 471 aa11.97□□□□□ -0.49
SORT1-204ENST00000482236 SLITRK1Q96PX8 696 aa11.97□□□□□ -0.49
SORT1-204ENST00000482236 C8orf33Q9H7E9 229 aaPredicted RBP11.97□□□□□ -0.49
SORT1-204ENST00000482236 KIF9Q9HAQ2 790 aa11.97□□□□□ -0.49
SORT1-204ENST00000482236 TRPM5Q9NZQ8 1165 aa11.97□□□□□ -0.49
SORT1-204ENST00000482236 SCN1AP35498 2009 aa11.97□□□□□ -0.49
SORT1-204ENST00000482236 GABRDO14764 452 aa11.96□□□□□ -0.49
SORT1-204ENST00000482236 CETN3O15182 167 aa11.96□□□□□ -0.49
SORT1-204ENST00000482236 TACC1O75410 805 aa11.96□□□□□ -0.49
SORT1-204ENST00000482236 PRAMEF12O95522 483 aa11.96□□□□□ -0.49
SORT1-204ENST00000482236 CST3P01034 146 aaPredicted RBP11.96□□□□□ -0.49
SORT1-204ENST00000482236 USP17L7P0C7H9 530 aa11.96□□□□□ -0.49
SORT1-204ENST00000482236 TRIM49P0CI25 452 aa11.96□□□□□ -0.49
SORT1-204ENST00000482236 TRIM49CP0CI26 452 aa11.96□□□□□ -0.49
SORT1-204ENST00000482236 PTPN1P18031 435 aaKnown RBP11.96□□□□□ -0.49
SORT1-204ENST00000482236 LMO2P25791 158 aa11.96□□□□□ -0.49
SORT1-204ENST00000482236 TARSP26639 723 aaKnown RBP11.96□□□□□ -0.49
SORT1-204ENST00000482236 MAGEA11P43364 429 aa11.96□□□□□ -0.49
SORT1-204ENST00000482236 AMPD2Q01433 879 aa11.96□□□□□ -0.49
SORT1-204ENST00000482236 FAM160A1Q05DH4 1040 aa11.96□□□□□ -0.49
SORT1-204ENST00000482236 SGSM1Q2NKQ1 1148 aa11.96□□□□□ -0.49
SORT1-204ENST00000482236 DENND5BQ6ZUT9 1274 aa11.96□□□□□ -0.49
SORT1-204ENST00000482236 SLC9A9Q8IVB4 645 aa11.96□□□□□ -0.49
SORT1-204ENST00000482236 SMYD4Q8IYR2 804 aaPredicted RBP11.96□□□□□ -0.49
SORT1-204ENST00000482236 GUF1Q8N442 669 aaKnown RBP11.96□□□□□ -0.49
SORT1-204ENST00000482236 B3GALNT2Q8NCR0 500 aa11.96□□□□□ -0.49
SORT1-204ENST00000482236 TMC2Q8TDI7 906 aa11.96□□□□□ -0.49
SORT1-204ENST00000482236 PARD3BQ8TEW8 1205 aa11.96□□□□□ -0.49
SORT1-204ENST00000482236 ATRIPQ8WXE1 791 aa11.96□□□□□ -0.49
SORT1-204ENST00000482236 PCED1BQ96HM7 432 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms