RNA–Protein interactions for RNA: ENST00000482217.1

VPS41-212, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 951 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-212ENST00000482217 ZBED4O75132 1171 aa4.56□□□□□ -1.68
VPS41-212ENST00000482217 TUSC2O75896 110 aa4.56□□□□□ -1.68
VPS41-212ENST00000482217 KIF20AO95235 890 aa4.56□□□□□ -1.68
VPS41-212ENST00000482217 ZNF888P0CJ79 500 aaPredicted RBP4.56□□□□□ -1.68
VPS41-212ENST00000482217 SYN1P17600 705 aa4.56□□□□□ -1.68
VPS41-212ENST00000482217 CTSSP25774 331 aa4.56□□□□□ -1.68
VPS41-212ENST00000482217 PEX2P28328 305 aa4.56□□□□□ -1.68
VPS41-212ENST00000482217 STIP1P31948 543 aaKnown RBP4.56□□□□□ -1.68
VPS41-212ENST00000482217 ABCD1P33897 745 aa4.56□□□□□ -1.68
VPS41-212ENST00000482217 HSPA4P34932 840 aa4.56□□□□□ -1.68
VPS41-212ENST00000482217 CASP5P51878 434 aa4.56□□□□□ -1.68
VPS41-212ENST00000482217 WNT3AP56704 352 aa4.56□□□□□ -1.68
VPS41-212ENST00000482217 EVCP57679 992 aa4.56□□□□□ -1.68
VPS41-212ENST00000482217 AKAP17AQ02040 695 aaKnown RBP4.56□□□□□ -1.68
VPS41-212ENST00000482217 KIF23Q02241 960 aaPredicted RBP4.56□□□□□ -1.68
VPS41-212ENST00000482217 PPARDQ03181 441 aa4.56□□□□□ -1.68
VPS41-212ENST00000482217 C17orf67Q0P5P2 114 aa4.56□□□□□ -1.68
VPS41-212ENST00000482217 MGAT2Q10469 447 aa4.56□□□□□ -1.68
VPS41-212ENST00000482217 ADAM15Q13444 863 aa4.56□□□□□ -1.68
VPS41-212ENST00000482217 NFYCQ13952 458 aa4.56□□□□□ -1.68
VPS41-212ENST00000482217 ARL13BQ3SXY8 428 aa4.56□□□□□ -1.68
VPS41-212ENST00000482217 KRTCAP3Q53RY4 240 aa4.56□□□□□ -1.68
VPS41-212ENST00000482217 C10orf76Q5T2E6 689 aa4.56□□□□□ -1.68
VPS41-212ENST00000482217 IZUMO3Q5VZ72 239 aa4.56□□□□□ -1.68
VPS41-212ENST00000482217 LIN54Q6MZP7 749 aa4.56□□□□□ -1.68
VPS41-212ENST00000482217 BORAQ6PGQ7 559 aa4.56□□□□□ -1.68
VPS41-212ENST00000482217 USP51Q70EK9 711 aa4.56□□□□□ -1.68
VPS41-212ENST00000482217 NUP54Q7Z3B4 507 aa4.56□□□□□ -1.68
VPS41-212ENST00000482217 CPOQ8IVL8 374 aa4.56□□□□□ -1.68
VPS41-212ENST00000482217 CEP97Q8IW35 865 aa4.56□□□□□ -1.68
VPS41-212ENST00000482217 COLGALT2Q8IYK4 626 aa4.56□□□□□ -1.68
VPS41-212ENST00000482217 GRAMD1CQ8IYS0 662 aa4.56□□□□□ -1.68
VPS41-212ENST00000482217 KIAA0319LQ8IZA0 1049 aa4.56□□□□□ -1.68
VPS41-212ENST00000482217 AVL9Q8NBF6 648 aa4.56□□□□□ -1.68
VPS41-212ENST00000482217 SYT8Q8NBV8 401 aa4.56□□□□□ -1.68
VPS41-212ENST00000482217 PIK3C3Q8NEB9 887 aa4.56□□□□□ -1.68
VPS41-212ENST00000482217 GPR156Q8NFN8 814 aa4.56□□□□□ -1.68
VPS41-212ENST00000482217 UTP15Q8TED0 518 aaKnown RBP4.56□□□□□ -1.68
VPS41-212ENST00000482217 SNX33Q8WV41 574 aa4.56□□□□□ -1.68
VPS41-212ENST00000482217 RIN2Q8WYP3 895 aaPredicted RBP4.56□□□□□ -1.68
VPS41-212ENST00000482217 GCDHQ92947 438 aaPredicted RBP4.56□□□□□ -1.68
VPS41-212ENST00000482217 COA7Q96BR5 231 aa4.56□□□□□ -1.68
VPS41-212ENST00000482217 GSDMAQ96QA5 445 aa4.56□□□□□ -1.68
VPS41-212ENST00000482217 TREX2Q9BQ50 279 aaPredicted RBP4.56□□□□□ -1.68
VPS41-212ENST00000482217 TEX13BQ9BXU2 312 aa4.56□□□□□ -1.68
VPS41-212ENST00000482217 B3GNT5Q9BYG0 378 aa4.56□□□□□ -1.68
VPS41-212ENST00000482217 CCDC68Q9H2F9 335 aa4.56□□□□□ -1.68
VPS41-212ENST00000482217 SLC6A15Q9H2J7 730 aa4.56□□□□□ -1.68
VPS41-212ENST00000482217 SPON1Q9HCB6 807 aa4.56□□□□□ -1.68
VPS41-212ENST00000482217 MSL2Q9HCI7 577 aa4.56□□□□□ -1.68
VPS41-212ENST00000482217 XAB2Q9HCS7 855 aaKnown RBP4.56□□□□□ -1.68
VPS41-212ENST00000482217 ST6GALNAC1Q9NSC7 600 aaPredicted RBP4.56□□□□□ -1.68
VPS41-212ENST00000482217 USP40Q9NVE5 1235 aa4.56□□□□□ -1.68
VPS41-212ENST00000482217 RBM28Q9NW13 759 aaKnown RBP4.56□□□□□ -1.68
VPS41-212ENST00000482217 IRAK4Q9NWZ3 460 aa4.56□□□□□ -1.68
VPS41-212ENST00000482217 TMOD4Q9NZQ9 345 aa4.56□□□□□ -1.68
VPS41-212ENST00000482217 ZHX1Q9UKY1 873 aaPredicted RBP4.56□□□□□ -1.68
VPS41-212ENST00000482217 CNOT11Q9UKZ1 510 aaKnown RBP4.56□□□□□ -1.68
VPS41-212ENST00000482217 FAM184BQ9ULE4 1060 aa4.56□□□□□ -1.68
VPS41-212ENST00000482217 AGTPBP1Q9UPW5 1226 aa4.56□□□□□ -1.68
VPS41-212ENST00000482217 RRP7AQ9Y3A4 280 aaKnown RBP4.56□□□□□ -1.68
VPS41-212ENST00000482217 N6AMT1Q9Y5N5 214 aa4.56□□□□□ -1.68
VPS41-212ENST00000482217 ADAMTS20P59510 1910 aa4.56□□□□□ -1.68
VPS41-212ENST00000482217 LINC00854A0A1B0GVQ3 168 aa4.55□□□□□ -1.68
VPS41-212ENST00000482217 PMS2P1A4D2B8 440 aa4.55□□□□□ -1.68
VPS41-212ENST00000482217 C2orf78A6NCI8 922 aa4.55□□□□□ -1.68
VPS41-212ENST00000482217 C2orf81A6NN90 581 aa4.55□□□□□ -1.68
VPS41-212ENST00000482217 KRTAP9-7A8MTY7 169 aa4.55□□□□□ -1.68
VPS41-212ENST00000482217 ARHGAP6O43182 974 aa4.55□□□□□ -1.68
VPS41-212ENST00000482217 NOBOXO60393 691 aa4.55□□□□□ -1.68
VPS41-212ENST00000482217 DTNBO60941 627 aa4.55□□□□□ -1.68
VPS41-212ENST00000482217 SOCS5O75159 536 aa4.55□□□□□ -1.68
VPS41-212ENST00000482217 GJB3O75712 270 aa4.55□□□□□ -1.68
VPS41-212ENST00000482217 STARD3NLO95772 234 aa4.55□□□□□ -1.68
VPS41-212ENST00000482217 THEGLP0DJG4 465 aa4.55□□□□□ -1.68
VPS41-212ENST00000482217 KRT13P13646 458 aa4.55□□□□□ -1.68
VPS41-212ENST00000482217 P4HA1P13674 534 aa4.55□□□□□ -1.68
VPS41-212ENST00000482217 GSPT1P15170 499 aaKnown RBP4.55□□□□□ -1.68
VPS41-212ENST00000482217 MAPK4P31152 587 aa4.55□□□□□ -1.68
VPS41-212ENST00000482217 HNF4AP41235 474 aa4.55□□□□□ -1.68
VPS41-212ENST00000482217 KIR2DL3P43628 341 aa4.55□□□□□ -1.68
VPS41-212ENST00000482217 MAPK10P53779 464 aa4.55□□□□□ -1.68
VPS41-212ENST00000482217 RRADP55042 308 aa4.55□□□□□ -1.68
VPS41-212ENST00000482217 ARL4CP56559 192 aa4.55□□□□□ -1.68
VPS41-212ENST00000482217 NLRP5P59047 1200 aa4.55□□□□□ -1.68
VPS41-212ENST00000482217 IFI35P80217 286 aaPredicted RBP4.55□□□□□ -1.68
VPS41-212ENST00000482217 PPP3CAQ08209 521 aa4.55□□□□□ -1.68
VPS41-212ENST00000482217 SF3B3Q15393 1217 aaKnown RBP4.55□□□□□ -1.68
VPS41-212ENST00000482217 ANKDD1AQ495B1 522 aa4.55□□□□□ -1.68
VPS41-212ENST00000482217 GAGE13Q4V321 117 aa4.55□□□□□ -1.68
VPS41-212ENST00000482217 NT5DC1Q5TFE4 455 aa4.55□□□□□ -1.68
VPS41-212ENST00000482217 PLEKHH3Q7Z736 793 aa4.55□□□□□ -1.68
VPS41-212ENST00000482217 DPP9Q86TI2 863 aa4.55□□□□□ -1.68
VPS41-212ENST00000482217 LRRTM4Q86VH4 590 aa4.55□□□□□ -1.68
VPS41-212ENST00000482217 KBTBD2Q8IY47 623 aa4.55□□□□□ -1.68
VPS41-212ENST00000482217 VPS52Q8N1B4 723 aa4.55□□□□□ -1.68
VPS41-212ENST00000482217 KRT78Q8N1N4 520 aa4.55□□□□□ -1.68
VPS41-212ENST00000482217 TRAPPC12Q8WVT3 735 aa4.55□□□□□ -1.68
VPS41-212ENST00000482217 NRG4Q8WWG1 115 aa4.55□□□□□ -1.68
VPS41-212ENST00000482217 HTRA1Q92743 480 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms