RNA–Protein interactions for RNA: ENST00000482056.2

C9orf3-218, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 1,951 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-218ENST00000482056 OTUD4Q01804 1114 aaKnown RBP16.13■□□□□ 0.17
C9orf3-218ENST00000482056 SLC25A11Q02978 314 aaKnown RBP16.13■□□□□ 0.17
C9orf3-218ENST00000482056 DNAJC3Q13217 504 aa16.13■□□□□ 0.17
C9orf3-218ENST00000482056 TFDP1Q14186 410 aa16.13■□□□□ 0.17
C9orf3-218ENST00000482056 SH3D19Q5HYK7 790 aa16.13■□□□□ 0.17
C9orf3-218ENST00000482056 DENND1BQ6P3S1 775 aa16.13■□□□□ 0.17
C9orf3-218ENST00000482056 ASRGL1Q7L266 308 aa16.13■□□□□ 0.17
C9orf3-218ENST00000482056 VSIG1Q86XK7 387 aa16.13■□□□□ 0.17
C9orf3-218ENST00000482056 C4orf33Q8N1A6 199 aa16.13■□□□□ 0.17
C9orf3-218ENST00000482056 ACTL9Q8TC94 416 aa16.13■□□□□ 0.17
C9orf3-218ENST00000482056 FARP1Q9Y4F1 1045 aaPredicted RBP16.13■□□□□ 0.17
C9orf3-218ENST00000482056 TTLL13PA6NNM8 815 aa16.13■□□□□ 0.17
C9orf3-218ENST00000482056 NFKBIEO00221 500 aa16.13■□□□□ 0.17
C9orf3-218ENST00000482056 B4GALT4O60513 344 aa16.13■□□□□ 0.17
C9orf3-218ENST00000482056 CST8O60676 142 aa16.13■□□□□ 0.17
C9orf3-218ENST00000482056 HOXC6P09630 235 aa16.13■□□□□ 0.17
C9orf3-218ENST00000482056 KDELR1P24390 212 aa16.13■□□□□ 0.17
C9orf3-218ENST00000482056 RPA3P35244 121 aaPredicted RBP16.13■□□□□ 0.17
C9orf3-218ENST00000482056 RFC1P35251 1148 aaPredicted RBP16.13■□□□□ 0.17
C9orf3-218ENST00000482056 MSH2P43246 934 aa16.13■□□□□ 0.17
C9orf3-218ENST00000482056 YARSP54577 528 aaKnown RBP16.13■□□□□ 0.17
C9orf3-218ENST00000482056 FSTL1Q12841 308 aa16.13■□□□□ 0.17
C9orf3-218ENST00000482056 ZC3H12AQ5D1E8 599 aaKnown RBP16.13■□□□□ 0.17
C9orf3-218ENST00000482056 FYB2Q5VWT5 728 aa16.13■□□□□ 0.17
C9orf3-218ENST00000482056 RIOX2Q8IUF8 465 aa16.13■□□□□ 0.17
C9orf3-218ENST00000482056 ANKMY2Q8IV38 441 aa16.13■□□□□ 0.17
C9orf3-218ENST00000482056 GPATCH11Q8N954 259 aa16.13■□□□□ 0.17
C9orf3-218ENST00000482056 FAXDC2Q96IV6 333 aa16.13■□□□□ 0.17
C9orf3-218ENST00000482056 LRRC37BQ96QE4 947 aa16.13■□□□□ 0.17
C9orf3-218ENST00000482056 PPP2R3BQ9Y5P8 575 aa16.13■□□□□ 0.17
C9orf3-218ENST00000482056 SNCAIPQ9Y6H5 919 aa16.13■□□□□ 0.17
C9orf3-218ENST00000482056 GOLGA8MH3BSY2 632 aa16.12■□□□□ 0.17
C9orf3-218ENST00000482056 EDF1O60869 148 aaKnown RBP16.12■□□□□ 0.17
C9orf3-218ENST00000482056 LRCH4O75427 683 aa16.12■□□□□ 0.17
C9orf3-218ENST00000482056 EDNRBP24530 442 aa16.12■□□□□ 0.17
C9orf3-218ENST00000482056 MGAT5Q09328 741 aa16.12■□□□□ 0.17
C9orf3-218ENST00000482056 MYO1EQ12965 1108 aa16.12■□□□□ 0.17
C9orf3-218ENST00000482056 ACAP1Q15027 740 aa16.12■□□□□ 0.17
C9orf3-218ENST00000482056 PTPN20Q4JDL3 420 aa16.12■□□□□ 0.17
C9orf3-218ENST00000482056 ZNF667Q5HYK9 610 aa16.12■□□□□ 0.17
C9orf3-218ENST00000482056 WDR78Q5VTH9 848 aa16.12■□□□□ 0.17
C9orf3-218ENST00000482056 PRAMEF18Q5VWM3 479 aa16.12■□□□□ 0.17
C9orf3-218ENST00000482056 TSHZ1Q6ZSZ6 1077 aa16.12■□□□□ 0.17
C9orf3-218ENST00000482056 PDIK1LQ8N165 341 aa16.12■□□□□ 0.17
C9orf3-218ENST00000482056 KCTD6Q8NC69 237 aa16.12■□□□□ 0.17
C9orf3-218ENST00000482056 ALKBH8Q96BT7 664 aaKnown RBP16.12■□□□□ 0.17
C9orf3-218ENST00000482056 XYLT2Q9H1B5 865 aa16.12■□□□□ 0.17
C9orf3-218ENST00000482056 NOP53Q9NZM5 478 aaKnown RBP16.12■□□□□ 0.17
C9orf3-218ENST00000482056 NXF1Q9UBU9 619 aaKnown RBP16.12■□□□□ 0.17
C9orf3-218ENST00000482056 STK38LQ9Y2H1 464 aa16.12■□□□□ 0.17
C9orf3-218ENST00000482056 GOLGB1Q14789 3259 aaKnown RBP16.12■□□□□ 0.17
C9orf3-218ENST00000482056 MCF2LO15068 1137 aa16.11■□□□□ 0.17
C9orf3-218ENST00000482056 TYROBPO43914 113 aa16.11■□□□□ 0.17
C9orf3-218ENST00000482056 RNF8O76064 485 aa16.11■□□□□ 0.17
C9orf3-218ENST00000482056 KRT16P08779 473 aa16.11■□□□□ 0.17
C9orf3-218ENST00000482056 TAZQ16635 292 aa16.11■□□□□ 0.17
C9orf3-218ENST00000482056 SMTNL2Q2TAL5 461 aa16.11■□□□□ 0.17
C9orf3-218ENST00000482056 ATF7IP2Q5U623 682 aa16.11■□□□□ 0.17
C9orf3-218ENST00000482056 SCARA3Q6AZY7 606 aa16.11■□□□□ 0.17
C9orf3-218ENST00000482056 LBX2Q6XYB7 198 aa16.11■□□□□ 0.17
C9orf3-218ENST00000482056 RFX6Q8HWS3 928 aa16.11■□□□□ 0.17
C9orf3-218ENST00000482056 RHPN2Q8IUC4 686 aa16.11■□□□□ 0.17
C9orf3-218ENST00000482056 PALM2Q8IXS6 379 aa16.11■□□□□ 0.17
C9orf3-218ENST00000482056 KIF2BQ8N4N8 673 aa16.11■□□□□ 0.17
C9orf3-218ENST00000482056 NAT8LQ8N9F0 302 aa16.11■□□□□ 0.17
C9orf3-218ENST00000482056 CPT1BQ92523 772 aa16.11■□□□□ 0.17
C9orf3-218ENST00000482056 MRRFQ96E11 262 aaKnown RBP16.11■□□□□ 0.17
C9orf3-218ENST00000482056 RSRC1Q96IZ7 334 aaKnown RBP16.11■□□□□ 0.17
C9orf3-218ENST00000482056 RPF1Q9H9Y2 349 aaKnown RBP16.11■□□□□ 0.17
C9orf3-218ENST00000482056 EBF2Q9HAK2 575 aa16.11■□□□□ 0.17
C9orf3-218ENST00000482056 ETNK1Q9HBU6 452 aa16.11■□□□□ 0.17
C9orf3-218ENST00000482056 RABGEF1Q9UJ41 708 aa16.11■□□□□ 0.17
C9orf3-218ENST00000482056 FZD1Q9UP38 647 aa16.11■□□□□ 0.17
C9orf3-218ENST00000482056 WDR90Q96KV7 1748 aa16.11■□□□□ 0.17
C9orf3-218ENST00000482056 NOP56O00567 594 aaKnown RBP16.11■□□□□ 0.17
C9orf3-218ENST00000482056 ACKR2O00590 384 aa16.11■□□□□ 0.17
C9orf3-218ENST00000482056 ABLIM1O14639 778 aa16.11■□□□□ 0.17
C9orf3-218ENST00000482056 KRT19P08727 400 aa16.11■□□□□ 0.17
C9orf3-218ENST00000482056 KRT4P19013 534 aa16.11■□□□□ 0.17
C9orf3-218ENST00000482056 ELF1P32519 619 aa16.11■□□□□ 0.17
C9orf3-218ENST00000482056 RASSF2P50749 326 aa16.11■□□□□ 0.17
C9orf3-218ENST00000482056 GPX6P59796 221 aa16.11■□□□□ 0.17
C9orf3-218ENST00000482056 MOGSQ13724 837 aa16.11■□□□□ 0.17
C9orf3-218ENST00000482056 MYLK2Q9H1R3 596 aa16.11■□□□□ 0.17
C9orf3-218ENST00000482056 ACSS3Q9H6R3 686 aa16.11■□□□□ 0.17
C9orf3-218ENST00000482056 KIF9Q9HAQ2 790 aa16.11■□□□□ 0.17
C9orf3-218ENST00000482056 E7ESA3 106 aa16.1■□□□□ 0.17
C9orf3-218ENST00000482056 APOC4-APOC2K7ER74 178 aa16.1■□□□□ 0.17
C9orf3-218ENST00000482056 HGSO14964 777 aaPredicted RBP16.1■□□□□ 0.17
C9orf3-218ENST00000482056 TM9SF1O15321 606 aa16.1■□□□□ 0.17
C9orf3-218ENST00000482056 WFS1O76024 890 aa16.1■□□□□ 0.17
C9orf3-218ENST00000482056 APOC2P02655 101 aa16.1■□□□□ 0.17
C9orf3-218ENST00000482056 PROZP22891 400 aa16.1■□□□□ 0.17
C9orf3-218ENST00000482056 RNASELQ05823 741 aaKnown RBP16.1■□□□□ 0.17
C9orf3-218ENST00000482056 SPDYAQ5MJ70 313 aa16.1■□□□□ 0.17
C9orf3-218ENST00000482056 LVRNQ6Q4G3 990 aa16.1■□□□□ 0.17
C9orf3-218ENST00000482056 ADGRD1Q6QNK2 874 aa16.1■□□□□ 0.17
C9orf3-218ENST00000482056 C3orf62Q6ZUJ4 267 aa16.1■□□□□ 0.17
C9orf3-218ENST00000482056 AGGF1Q8N302 714 aaeCLIP16.1■□□□□ 0.17
C9orf3-218ENST00000482056 PLCD3Q8N3E9 789 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms