RNA–Protein interactions for RNA: ENST00000481116.5

ABCF3-215, Transcript of ATP binding cassette subfamily F member 3, human

TSL 4

Gene ABCF3, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABCF3-215	ENST00000481116	MAGEC2	Q9UBF1	373 aa	Predicted RBP	13.76	□□□□□ -0.21
ABCF3-215	ENST00000481116	ARIH1	Q9Y4X5	557 aa	Predicted RBP	13.76	□□□□□ -0.21
ABCF3-215	ENST00000481116	TRIM49B	A6NDI0	452 aa		13.75	□□□□□ -0.21
ABCF3-215	ENST00000481116	SLC38A8	A6NNN8	435 aa		13.75	□□□□□ -0.21
ABCF3-215	ENST00000481116	HEPACAM2	A8MVW5	462 aa		13.75	□□□□□ -0.21
ABCF3-215	ENST00000481116		A8MXQ7	604 aa		13.75	□□□□□ -0.21
ABCF3-215	ENST00000481116	LRRN2	O75325	713 aa		13.75	□□□□□ -0.21
ABCF3-215	ENST00000481116	SMC2	O95347	1197 aa		13.75	□□□□□ -0.21
ABCF3-215	ENST00000481116	HLA-DRA	P01903	254 aa		13.75	□□□□□ -0.21
ABCF3-215	ENST00000481116	F11	P03951	625 aa		13.75	□□□□□ -0.21
ABCF3-215	ENST00000481116	DCN	P07585	359 aa	Known RBP	13.75	□□□□□ -0.21
ABCF3-215	ENST00000481116	PTPN1	P18031	435 aa	Known RBP	13.75	□□□□□ -0.21
ABCF3-215	ENST00000481116	AOC1	P19801	751 aa		13.75	□□□□□ -0.21
ABCF3-215	ENST00000481116	CD72	P21854	359 aa		13.75	□□□□□ -0.21
ABCF3-215	ENST00000481116	RFX1	P22670	979 aa		13.75	□□□□□ -0.21
ABCF3-215	ENST00000481116	PSMC2	P35998	433 aa	Known RBP	13.75	□□□□□ -0.21
ABCF3-215	ENST00000481116	GCLM	P48507	274 aa		13.75	□□□□□ -0.21
ABCF3-215	ENST00000481116	CLCN5	P51795	746 aa		13.75	□□□□□ -0.21
ABCF3-215	ENST00000481116	AP3M2	P53677	418 aa		13.75	□□□□□ -0.21
ABCF3-215	ENST00000481116	PPP3CA	Q08209	521 aa		13.75	□□□□□ -0.21
ABCF3-215	ENST00000481116	ZNF667	Q5HYK9	610 aa		13.75	□□□□□ -0.21
ABCF3-215	ENST00000481116	ARID3B	Q8IVW6	561 aa	Predicted RBP	13.75	□□□□□ -0.21
ABCF3-215	ENST00000481116	PCED1B	Q96HM7	432 aa		13.75	□□□□□ -0.21
ABCF3-215	ENST00000481116	LRRC3B	Q96PB8	259 aa		13.75	□□□□□ -0.21
ABCF3-215	ENST00000481116	FOXQ1	Q9C009	403 aa		13.75	□□□□□ -0.21
ABCF3-215	ENST00000481116	SMG9	Q9H0W8	520 aa	Known RBP	13.75	□□□□□ -0.21
ABCF3-215	ENST00000481116	KCNH6	Q9H252	994 aa		13.75	□□□□□ -0.21
ABCF3-215	ENST00000481116	ABCB6	Q9NP58	842 aa		13.75	□□□□□ -0.21
ABCF3-215	ENST00000481116	HEBP1	Q9NRV9	189 aa		13.75	□□□□□ -0.21
ABCF3-215	ENST00000481116	MUC6	Q6W4X9	2439 aa		13.75	□□□□□ -0.21
ABCF3-215	ENST00000481116	MYO16	Q9Y6X6	1858 aa		13.74	□□□□□ -0.21
ABCF3-215	ENST00000481116	PATJ	Q8NI35	1801 aa		13.74	□□□□□ -0.21
ABCF3-215	ENST00000481116		H0Y858	1186 aa		13.74	□□□□□ -0.21
ABCF3-215	ENST00000481116	CLDN5	O00501	218 aa		13.74	□□□□□ -0.21
ABCF3-215	ENST00000481116	IKBKB	O14920	756 aa		13.74	□□□□□ -0.21
ABCF3-215	ENST00000481116	MAPK13	O15264	365 aa		13.74	□□□□□ -0.21
ABCF3-215	ENST00000481116	KIN	O60870	393 aa	Known RBP	13.74	□□□□□ -0.21
ABCF3-215	ENST00000481116	PRAMEF12	O95522	483 aa		13.74	□□□□□ -0.21
ABCF3-215	ENST00000481116	CSH1	P0DML2	217 aa		13.74	□□□□□ -0.21
ABCF3-215	ENST00000481116	CSH2	P0DML3	217 aa		13.74	□□□□□ -0.21
ABCF3-215	ENST00000481116	KRT13	P13646	458 aa		13.74	□□□□□ -0.21
ABCF3-215	ENST00000481116	CD44	P16070	742 aa	Known RBP	13.74	□□□□□ -0.21
ABCF3-215	ENST00000481116	RPL13	P26373	211 aa	Known RBP	13.74	□□□□□ -0.21
ABCF3-215	ENST00000481116	CDC25C	P30307	473 aa		13.74	□□□□□ -0.21
ABCF3-215	ENST00000481116	GDI1	P31150	447 aa		13.74	□□□□□ -0.21
ABCF3-215	ENST00000481116	GRIK1	P39086	918 aa		13.74	□□□□□ -0.21
ABCF3-215	ENST00000481116	PIK3CA	P42336	1068 aa		13.74	□□□□□ -0.21
ABCF3-215	ENST00000481116	NLRP12	P59046	1061 aa		13.74	□□□□□ -0.21
ABCF3-215	ENST00000481116	RPL10A	P62906	217 aa	Known RBP	13.74	□□□□□ -0.21
ABCF3-215	ENST00000481116	NHLH1	Q02575	133 aa		13.74	□□□□□ -0.21
ABCF3-215	ENST00000481116	ORC1	Q13415	861 aa		13.74	□□□□□ -0.21
ABCF3-215	ENST00000481116	MLF2	Q15773	248 aa	Predicted RBP	13.74	□□□□□ -0.21
ABCF3-215	ENST00000481116	EDRF1	Q3B7T1	1238 aa		13.74	□□□□□ -0.21
ABCF3-215	ENST00000481116	CFAP221	Q4G0U5	840 aa		13.74	□□□□□ -0.21
ABCF3-215	ENST00000481116	ARHGAP15	Q53QZ3	475 aa		13.74	□□□□□ -0.21
ABCF3-215	ENST00000481116	ANKRD40	Q6AI12	368 aa		13.74	□□□□□ -0.21
ABCF3-215	ENST00000481116	C4orf50	Q6ZRC1	276 aa		13.74	□□□□□ -0.21
ABCF3-215	ENST00000481116	INTS8	Q75QN2	995 aa	Known RBP	13.74	□□□□□ -0.21
ABCF3-215	ENST00000481116	MYCBPAP	Q8TBZ2	947 aa		13.74	□□□□□ -0.21
ABCF3-215	ENST00000481116	PHOX2B	Q99453	314 aa		13.74	□□□□□ -0.21
ABCF3-215	ENST00000481116	TRMT61B	Q9BVS5	477 aa	Known RBP	13.74	□□□□□ -0.21
ABCF3-215	ENST00000481116	SLC46A2	Q9BY10	475 aa		13.74	□□□□□ -0.21
ABCF3-215	ENST00000481116	B3GNT5	Q9BYG0	378 aa		13.74	□□□□□ -0.21
ABCF3-215	ENST00000481116	GPR88	Q9GZN0	384 aa		13.74	□□□□□ -0.21
ABCF3-215	ENST00000481116	BRD9	Q9H8M2	597 aa		13.74	□□□□□ -0.21
ABCF3-215	ENST00000481116	VRTN	Q9H8Y1	702 aa		13.74	□□□□□ -0.21
ABCF3-215	ENST00000481116	TRPV4	Q9HBA0	871 aa		13.74	□□□□□ -0.21
ABCF3-215	ENST00000481116	TMEM30A	Q9NV96	361 aa		13.74	□□□□□ -0.21
ABCF3-215	ENST00000481116	CHMP5	Q9NZZ3	219 aa		13.74	□□□□□ -0.21
ABCF3-215	ENST00000481116	MAN1B1	Q9UKM7	699 aa		13.74	□□□□□ -0.21
ABCF3-215	ENST00000481116	MTF2	Q9Y483	593 aa	Predicted RBP	13.74	□□□□□ -0.21
ABCF3-215	ENST00000481116	BIN1	O00499	593 aa		13.73	□□□□□ -0.21
ABCF3-215	ENST00000481116	GALR2	O43603	387 aa	Predicted RBP	13.73	□□□□□ -0.21
ABCF3-215	ENST00000481116	TADA3	O75528	432 aa		13.73	□□□□□ -0.21
ABCF3-215	ENST00000481116	FGF19	O95750	216 aa		13.73	□□□□□ -0.21
ABCF3-215	ENST00000481116	PSMC3	P17980	439 aa		13.73	□□□□□ -0.21
ABCF3-215	ENST00000481116	MAGEA11	P43364	429 aa		13.73	□□□□□ -0.21
ABCF3-215	ENST00000481116	CACNA2D1	P54289	1103 aa		13.73	□□□□□ -0.21
ABCF3-215	ENST00000481116	STARD6	P59095	220 aa		13.73	□□□□□ -0.21
ABCF3-215	ENST00000481116	SGSM1	Q2NKQ1	1148 aa		13.73	□□□□□ -0.21
ABCF3-215	ENST00000481116	TXNDC8	Q6A555	127 aa		13.73	□□□□□ -0.21
ABCF3-215	ENST00000481116	PHLDB3	Q6NSJ2	640 aa		13.73	□□□□□ -0.21
ABCF3-215	ENST00000481116	TPRG1	Q6ZUI0	275 aa		13.73	□□□□□ -0.21
ABCF3-215	ENST00000481116	MFSD6L	Q8IWD5	586 aa		13.73	□□□□□ -0.21
ABCF3-215	ENST00000481116	ADSSL1	Q8N142	457 aa		13.73	□□□□□ -0.21
ABCF3-215	ENST00000481116	MAB21L3	Q8N8X9	362 aa		13.73	□□□□□ -0.21
ABCF3-215	ENST00000481116	TAS1R2	Q8TE23	839 aa		13.73	□□□□□ -0.21
ABCF3-215	ENST00000481116	FUBP3	Q96I24	572 aa	Known RBP eCLIP	13.73	□□□□□ -0.21
ABCF3-215	ENST00000481116	ZFYVE19	Q96K21	471 aa		13.73	□□□□□ -0.21
ABCF3-215	ENST00000481116	GCNA	Q96QF7	691 aa		13.73	□□□□□ -0.21
ABCF3-215	ENST00000481116	TASP1	Q9H6P5	420 aa		13.73	□□□□□ -0.21
ABCF3-215	ENST00000481116	APOBEC3G	Q9HC16	384 aa	Known RBP	13.73	□□□□□ -0.21
ABCF3-215	ENST00000481116	FAM86C1	Q9NVL1	165 aa		13.73	□□□□□ -0.21
ABCF3-215	ENST00000481116	HMGXB4	Q9UGU5	601 aa		13.73	□□□□□ -0.21
ABCF3-215	ENST00000481116	HOOK1	Q9UJC3	728 aa	Known RBP	13.73	□□□□□ -0.21
ABCF3-215	ENST00000481116	SHISA7	A6NL88	538 aa		13.72	□□□□□ -0.21
ABCF3-215	ENST00000481116	ZNF263	O14978	683 aa		13.72	□□□□□ -0.21
ABCF3-215	ENST00000481116	CETN3	O15182	167 aa		13.72	□□□□□ -0.21
ABCF3-215	ENST00000481116	NOL4	O94818	638 aa		13.72	□□□□□ -0.21
ABCF3-215	ENST00000481116	ASS1	P00966	412 aa	Known RBP	13.72	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 421.8 ms