RNA–Protein interactions for RNA: ENST00000480923.5

VPS36-204, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 3

Gene VPS36, Length 614 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-204ENST00000480923 PPP3CAQ08209 521 aa21.51■■□□□ 1.03
VPS36-204ENST00000480923 STXBP5Q5T5C0 1151 aa21.51■■□□□ 1.03
VPS36-204ENST00000480923 GPR158Q5T848 1215 aa21.51■■□□□ 1.03
VPS36-204ENST00000480923 ANKRD40Q6AI12 368 aa21.51■■□□□ 1.03
VPS36-204ENST00000480923 MYCBPAPQ8TBZ2 947 aa21.51■■□□□ 1.03
VPS36-204ENST00000480923 TAF4BQ92750 862 aa21.51■■□□□ 1.03
VPS36-204ENST00000480923 IMPG2Q9BZV3 1241 aa21.51■■□□□ 1.03
VPS36-204ENST00000480923 DPEP3Q9H4B8 488 aa21.51■■□□□ 1.03
VPS36-204ENST00000480923 IL21Q9HBE4 155 aa21.51■■□□□ 1.03
VPS36-204ENST00000480923 UTP3Q9NQZ2 479 aaKnown RBP eCLIP21.51■■□□□ 1.03
VPS36-204ENST00000480923 NME7Q9Y5B8 376 aa21.51■■□□□ 1.03
VPS36-204ENST00000480923 KRBA1A5PL33 1030 aa21.5■■□□□ 1.03
VPS36-204ENST00000480923 TRIM49BA6NDI0 452 aa21.5■■□□□ 1.03
VPS36-204ENST00000480923 BIN1O00499 593 aa21.5■■□□□ 1.03
VPS36-204ENST00000480923 PTPN1P18031 435 aaKnown RBP21.5■■□□□ 1.03
VPS36-204ENST00000480923 BDNFP23560 247 aa21.5■■□□□ 1.03
VPS36-204ENST00000480923 VIPR2P41587 438 aa21.5■■□□□ 1.03
VPS36-204ENST00000480923 MAGEA11P43364 429 aa21.5■■□□□ 1.03
VPS36-204ENST00000480923 CYP4F8P98187 520 aa21.5■■□□□ 1.03
VPS36-204ENST00000480923 FKBP3Q00688 224 aaKnown RBP21.5■■□□□ 1.03
VPS36-204ENST00000480923 LRRC63Q05C16 580 aa21.5■■□□□ 1.03
VPS36-204ENST00000480923 GRM2Q14416 872 aa21.5■■□□□ 1.03
VPS36-204ENST00000480923 ASTLQ6HA08 431 aaPredicted RBP21.5■■□□□ 1.03
VPS36-204ENST00000480923 SPOPLQ6IQ16 392 aa21.5■■□□□ 1.03
VPS36-204ENST00000480923 PCED1BQ96HM7 432 aa21.5■■□□□ 1.03
VPS36-204ENST00000480923 ARHGEF3Q9NR81 526 aa21.5■■□□□ 1.03
VPS36-204ENST00000480923 SLC16A3O15427 465 aaKnown RBP21.49■■□□□ 1.03
VPS36-204ENST00000480923 ASS1P00966 412 aaKnown RBP21.49■■□□□ 1.03
VPS36-204ENST00000480923 HMGA1P17096 107 aaKnown RBP21.49■■□□□ 1.03
VPS36-204ENST00000480923 NPR3P17342 541 aa21.49■■□□□ 1.03
VPS36-204ENST00000480923 CCNE1P24864 410 aa21.49■■□□□ 1.03
VPS36-204ENST00000480923 GRIK1P39086 918 aa21.49■■□□□ 1.03
VPS36-204ENST00000480923 PPP1R2P41236 205 aa21.49■■□□□ 1.03
VPS36-204ENST00000480923 PFKPQ01813 784 aa21.49■■□□□ 1.03
VPS36-204ENST00000480923 VSTM1Q6UX27 236 aa21.49■■□□□ 1.03
VPS36-204ENST00000480923 TAS1R2Q8TE23 839 aa21.49■■□□□ 1.03
VPS36-204ENST00000480923 DHTKD1Q96HY7 919 aaPredicted RBP21.49■■□□□ 1.03
VPS36-204ENST00000480923 SDCBP2Q9H190 292 aa21.49■■□□□ 1.03
VPS36-204ENST00000480923 TMEM8AQ9HCN3 771 aa21.49■■□□□ 1.03
VPS36-204ENST00000480923 SLC38A8A6NNN8 435 aa21.48■■□□□ 1.03
VPS36-204ENST00000480923 STX10O60499 249 aa21.48■■□□□ 1.03
VPS36-204ENST00000480923 CD44P16070 742 aaKnown RBP21.48■■□□□ 1.03
VPS36-204ENST00000480923 ANXA13P27216 316 aa21.48■■□□□ 1.03
VPS36-204ENST00000480923 GTF2H1P32780 548 aa21.48■■□□□ 1.03
VPS36-204ENST00000480923 IER5LQ5T953 404 aa21.48■■□□□ 1.03
VPS36-204ENST00000480923 TCERG1LQ5VWI1 586 aa21.48■■□□□ 1.03
VPS36-204ENST00000480923 CWF19L1Q69YN2 538 aaKnown RBP21.48■■□□□ 1.03
VPS36-204ENST00000480923 KRT39Q6A163 491 aa21.48■■□□□ 1.03
VPS36-204ENST00000480923 KLHL10Q6JEL2 608 aa21.48■■□□□ 1.03
VPS36-204ENST00000480923 VITQ6UXI7 678 aa21.48■■□□□ 1.03
VPS36-204ENST00000480923 GPIHBP1Q8IV16 184 aa21.48■■□□□ 1.03
VPS36-204ENST00000480923 ARID3BQ8IVW6 561 aaPredicted RBP21.48■■□□□ 1.03
VPS36-204ENST00000480923 B3GALNT2Q8NCR0 500 aa21.48■■□□□ 1.03
VPS36-204ENST00000480923 CCDC150Q8NCX0 1101 aa21.48■■□□□ 1.03
VPS36-204ENST00000480923 TRMT61BQ9BVS5 477 aaKnown RBP21.48■■□□□ 1.03
VPS36-204ENST00000480923 TASP1Q9H6P5 420 aa21.48■■□□□ 1.03
VPS36-204ENST00000480923 TRPV4Q9HBA0 871 aa21.48■■□□□ 1.03
VPS36-204ENST00000480923 UXTQ9UBK9 157 aaPredicted RBP21.48■■□□□ 1.03
VPS36-204ENST00000480923 ARIH1Q9Y4X5 557 aaPredicted RBP21.48■■□□□ 1.03
VPS36-204ENST00000480923 DPYSL4O14531 572 aa21.47■■□□□ 1.03
VPS36-204ENST00000480923 NOL4O94818 638 aa21.47■■□□□ 1.03
VPS36-204ENST00000480923 CLCN5P51795 746 aa21.47■■□□□ 1.03
VPS36-204ENST00000480923 NLRP12P59046 1061 aa21.47■■□□□ 1.03
VPS36-204ENST00000480923 NOP14P78316 857 aaKnown RBP21.47■■□□□ 1.03
VPS36-204ENST00000480923 MORC3Q14149 939 aa21.47■■□□□ 1.03
VPS36-204ENST00000480923 DCAF17Q5H9S7 520 aaPredicted RBP21.47■■□□□ 1.03
VPS36-204ENST00000480923 ZC3H3Q8IXZ2 948 aaKnown RBP21.47■■□□□ 1.03
VPS36-204ENST00000480923 TMEM105Q8N8V8 129 aa21.47■■□□□ 1.03
VPS36-204ENST00000480923 DEPDC1BQ8WUY9 529 aa21.47■■□□□ 1.03
VPS36-204ENST00000480923 E2F7Q96AV8 911 aa21.47■■□□□ 1.03
VPS36-204ENST00000480923 TNIP3Q96KP6 325 aa21.47■■□□□ 1.03
VPS36-204ENST00000480923 KCNH6Q9H252 994 aa21.47■■□□□ 1.03
VPS36-204ENST00000480923 BRD9Q9H8M2 597 aa21.47■■□□□ 1.03
VPS36-204ENST00000480923 TBC1D17Q9HA65 648 aa21.47■■□□□ 1.03
VPS36-204ENST00000480923 HEPACAM2A8MVW5 462 aa21.46■■□□□ 1.03
VPS36-204ENST00000480923 TRIM66O15016 1216 aa21.46■■□□□ 1.03
VPS36-204ENST00000480923 F11P03951 625 aa21.46■■□□□ 1.03
VPS36-204ENST00000480923 PSMC3P17980 439 aa21.46■■□□□ 1.03
VPS36-204ENST00000480923 BMP6P22004 513 aa21.46■■□□□ 1.03
VPS36-204ENST00000480923 ASPAP45381 313 aa21.46■■□□□ 1.03
VPS36-204ENST00000480923 MXI1P50539 228 aa21.46■■□□□ 1.03
VPS36-204ENST00000480923 CAMK4Q16566 473 aa21.46■■□□□ 1.03
VPS36-204ENST00000480923 SLC44A4Q53GD3 710 aa21.46■■□□□ 1.03
VPS36-204ENST00000480923 NELFBQ8WX92 580 aa21.46■■□□□ 1.03
VPS36-204ENST00000480923 MRPS31Q92665 395 aaKnown RBP21.46■■□□□ 1.03
VPS36-204ENST00000480923 SHDQ96IW2 340 aa21.46■■□□□ 1.03
VPS36-204ENST00000480923 ZNF518BQ9C0D4 1074 aa21.46■■□□□ 1.03
VPS36-204ENST00000480923 ELOVL4Q9GZR5 314 aa21.46■■□□□ 1.03
VPS36-204ENST00000480923 APOBEC3GQ9HC16 384 aaKnown RBP21.46■■□□□ 1.03
VPS36-204ENST00000480923 PPP1R3GB7ZBB8 358 aa21.45■■□□□ 1.02
VPS36-204ENST00000480923 CLDN5O00501 218 aa21.45■■□□□ 1.02
VPS36-204ENST00000480923 AOC1P19801 751 aa21.45■■□□□ 1.02
VPS36-204ENST00000480923 GDI1P31150 447 aa21.45■■□□□ 1.02
VPS36-204ENST00000480923 NDST1P52848 882 aa21.45■■□□□ 1.02
VPS36-204ENST00000480923 MCCD1P59942 119 aaPredicted RBP21.45■■□□□ 1.02
VPS36-204ENST00000480923 MLF2Q15773 248 aaPredicted RBP21.45■■□□□ 1.02
VPS36-204ENST00000480923 TMEM150AQ86TG1 271 aa21.45■■□□□ 1.02
VPS36-204ENST00000480923 ACOT1Q86TX2 421 aa21.45■■□□□ 1.02
VPS36-204ENST00000480923 MFSD6LQ8IWD5 586 aa21.45■■□□□ 1.02
VPS36-204ENST00000480923 YAF2Q8IY57 180 aa21.45■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms