RNA–Protein interactions for RNA: ENST00000480382.1

CCM2-212, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 406 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-212ENST00000480382 CT47A1Q5JQC4 288 aaPredicted RBP12.86□□□□□ -0.35
CCM2-212ENST00000480382 PRSS36Q5K4E3 855 aa12.86□□□□□ -0.35
CCM2-212ENST00000480382 PDZD4Q76G19 769 aaPredicted RBP12.86□□□□□ -0.35
CCM2-212ENST00000480382 ACOT1Q86TX2 421 aa12.86□□□□□ -0.35
CCM2-212ENST00000480382 FAM114A1Q8IWE2 563 aa12.86□□□□□ -0.35
CCM2-212ENST00000480382 SCN4BQ8IWT1 228 aa12.86□□□□□ -0.35
CCM2-212ENST00000480382 PSMG2Q969U7 264 aa12.86□□□□□ -0.35
CCM2-212ENST00000480382 TCEAL4Q96EI5 215 aa12.86□□□□□ -0.35
CCM2-212ENST00000480382 TNIP3Q96KP6 325 aa12.86□□□□□ -0.35
CCM2-212ENST00000480382 TWNKQ96RR1 684 aa12.86□□□□□ -0.35
CCM2-212ENST00000480382 CYP3A43Q9HB55 503 aa12.86□□□□□ -0.35
CCM2-212ENST00000480382 ZNF334Q9HCZ1 680 aaPredicted RBP12.86□□□□□ -0.35
CCM2-212ENST00000480382 AVENQ9NQS1 362 aaPredicted RBP12.86□□□□□ -0.35
CCM2-212ENST00000480382 SAMSN1Q9NSI8 373 aaKnown RBP12.86□□□□□ -0.35
CCM2-212ENST00000480382 MAGEC2Q9UBF1 373 aaPredicted RBP12.86□□□□□ -0.35
CCM2-212ENST00000480382 MRPS23Q9Y3D9 190 aaKnown RBP12.86□□□□□ -0.35
CCM2-212ENST00000480382 NFE2L3Q9Y4A8 694 aa12.86□□□□□ -0.35
CCM2-212ENST00000480382 NUP210Q8TEM1 1887 aaPredicted RBP12.86□□□□□ -0.35
CCM2-212ENST00000480382 MYO16Q9Y6X6 1858 aa12.86□□□□□ -0.35
CCM2-212ENST00000480382 ZNF638Q14966 1978 aaKnown RBP12.85□□□□□ -0.35
CCM2-212ENST00000480382 CLDN5O00501 218 aa12.85□□□□□ -0.35
CCM2-212ENST00000480382 P4HA2O15460 535 aa12.85□□□□□ -0.35
CCM2-212ENST00000480382 CILPO75339 1184 aa12.85□□□□□ -0.35
CCM2-212ENST00000480382 GJA1P17302 382 aa12.85□□□□□ -0.35
CCM2-212ENST00000480382 PTMSP20962 102 aa12.85□□□□□ -0.35
CCM2-212ENST00000480382 MAGEA11P43364 429 aa12.85□□□□□ -0.35
CCM2-212ENST00000480382 CACNA2D1P54289 1103 aa12.85□□□□□ -0.35
CCM2-212ENST00000480382 CETN1Q12798 172 aa12.85□□□□□ -0.35
CCM2-212ENST00000480382 CUL2Q13617 745 aa12.85□□□□□ -0.35
CCM2-212ENST00000480382 DNAJB7Q7Z6W7 309 aaPredicted RBP12.85□□□□□ -0.35
CCM2-212ENST00000480382 ITIH5Q86UX2 942 aa12.85□□□□□ -0.35
CCM2-212ENST00000480382 FAM35AQ86V20 835 aa12.85□□□□□ -0.35
CCM2-212ENST00000480382 UNC93AQ86WB7 457 aa12.85□□□□□ -0.35
CCM2-212ENST00000480382 NPAS3Q8IXF0 933 aa12.85□□□□□ -0.35
CCM2-212ENST00000480382 ZDHHC14Q8IZN3 488 aa12.85□□□□□ -0.35
CCM2-212ENST00000480382 PLCD3Q8N3E9 789 aa12.85□□□□□ -0.35
CCM2-212ENST00000480382 ENOX1Q8TC92 643 aaKnown RBP12.85□□□□□ -0.35
CCM2-212ENST00000480382 FGF13Q92913 245 aa12.85□□□□□ -0.35
CCM2-212ENST00000480382 FAXDC2Q96IV6 333 aa12.85□□□□□ -0.35
CCM2-212ENST00000480382 LRRC3Q9BY71 257 aa12.85□□□□□ -0.35
CCM2-212ENST00000480382 B3GNT5Q9BYG0 378 aa12.85□□□□□ -0.35
CCM2-212ENST00000480382 ZNF518BQ9C0D4 1074 aa12.85□□□□□ -0.35
CCM2-212ENST00000480382 ELOVL4Q9GZR5 314 aa12.85□□□□□ -0.35
CCM2-212ENST00000480382 CISHQ9NSE2 258 aa12.85□□□□□ -0.35
CCM2-212ENST00000480382 FAM49BQ9NUQ9 324 aa12.85□□□□□ -0.35
CCM2-212ENST00000480382 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.85□□□□□ -0.35
CCM2-212ENST00000480382 GCNT4Q9P109 453 aa12.85□□□□□ -0.35
CCM2-212ENST00000480382 MUTYHQ9UIF7 546 aa12.85□□□□□ -0.35
CCM2-212ENST00000480382 CDH7Q9ULB5 785 aa12.85□□□□□ -0.35
CCM2-212ENST00000480382 ASB3Q9Y575 518 aa12.85□□□□□ -0.35
CCM2-212ENST00000480382 A0A1W2PRU2 124 aa12.84□□□□□ -0.35
CCM2-212ENST00000480382 KCNJ18B7U540 433 aa12.84□□□□□ -0.35
CCM2-212ENST00000480382 MOSPD3O75425 235 aa12.84□□□□□ -0.35
CCM2-212ENST00000480382 ASGR2P07307 311 aa12.84□□□□□ -0.35
CCM2-212ENST00000480382 LAMP2P13473 410 aa12.84□□□□□ -0.35
CCM2-212ENST00000480382 CCDC130P13994 396 aa12.84□□□□□ -0.35
CCM2-212ENST00000480382 GRIK1P39086 918 aa12.84□□□□□ -0.35
CCM2-212ENST00000480382 EPHA5P54756 1037 aa12.84□□□□□ -0.35
CCM2-212ENST00000480382 RPL10AP62906 217 aaKnown RBP12.84□□□□□ -0.35
CCM2-212ENST00000480382 MTMR3Q13615 1198 aa12.84□□□□□ -0.35
CCM2-212ENST00000480382 KCNJ12Q14500 433 aa12.84□□□□□ -0.35
CCM2-212ENST00000480382 MAN2A1Q16706 1144 aa12.84□□□□□ -0.35
CCM2-212ENST00000480382 ZNF394Q53GI3 561 aa12.84□□□□□ -0.35
CCM2-212ENST00000480382 CYP4A22Q5TCH4 519 aa12.84□□□□□ -0.35
CCM2-212ENST00000480382 VSTM1Q6UX27 236 aa12.84□□□□□ -0.35
CCM2-212ENST00000480382 ARHGEF19Q8IW93 802 aa12.84□□□□□ -0.35
CCM2-212ENST00000480382 C12orf29Q8N999 325 aa12.84□□□□□ -0.35
CCM2-212ENST00000480382 LEMD2Q8NC56 503 aa12.84□□□□□ -0.35
CCM2-212ENST00000480382 ST13P5Q8NFI4 369 aaPredicted RBP12.84□□□□□ -0.35
CCM2-212ENST00000480382 LMO3Q8TAP4 145 aa12.84□□□□□ -0.35
CCM2-212ENST00000480382 SHKBP1Q8TBC3 707 aa12.84□□□□□ -0.35
CCM2-212ENST00000480382 WHAMMQ8TF30 809 aa12.84□□□□□ -0.35
CCM2-212ENST00000480382 NT5C1BQ96P26 610 aa12.84□□□□□ -0.35
CCM2-212ENST00000480382 MED10Q9BTT4 135 aa12.84□□□□□ -0.35
CCM2-212ENST00000480382 NT5C1AQ9BXI3 368 aa12.84□□□□□ -0.35
CCM2-212ENST00000480382 INTS2Q9H0H0 1204 aaKnown RBP12.84□□□□□ -0.35
CCM2-212ENST00000480382 TMEM30AQ9NV96 361 aa12.84□□□□□ -0.35
CCM2-212ENST00000480382 EPS15L1Q9UBC2 864 aa12.84□□□□□ -0.35
CCM2-212ENST00000480382 LIMD1Q9UGP4 676 aa12.84□□□□□ -0.35
CCM2-212ENST00000480382 MYO10Q9HD67 2058 aa12.84□□□□□ -0.35
CCM2-212ENST00000480382 SLC38A8A6NNN8 435 aa12.83□□□□□ -0.36
CCM2-212ENST00000480382 F8VP50 259 aa12.83□□□□□ -0.36
CCM2-212ENST00000480382 ZNF197O14709 1029 aa12.83□□□□□ -0.36
CCM2-212ENST00000480382 TRIM66O15016 1216 aa12.83□□□□□ -0.36
CCM2-212ENST00000480382 CSH1P0DML2 217 aa12.83□□□□□ -0.36
CCM2-212ENST00000480382 CSH2P0DML3 217 aa12.83□□□□□ -0.36
CCM2-212ENST00000480382 PRKCSHP14314 528 aaPredicted RBP12.83□□□□□ -0.36
CCM2-212ENST00000480382 TBXAS1P24557 533 aaPredicted RBP12.83□□□□□ -0.36
CCM2-212ENST00000480382 ANXA13P27216 316 aa12.83□□□□□ -0.36
CCM2-212ENST00000480382 GABRR2P28476 465 aa12.83□□□□□ -0.36
CCM2-212ENST00000480382 MYL5Q02045 173 aa12.83□□□□□ -0.36
CCM2-212ENST00000480382 TEAD2Q15562 447 aa12.83□□□□□ -0.36
CCM2-212ENST00000480382 TAF12Q16514 161 aa12.83□□□□□ -0.36
CCM2-212ENST00000480382 ANO6Q4KMQ2 910 aa12.83□□□□□ -0.36
CCM2-212ENST00000480382 CDKAL1Q5VV42 579 aa12.83□□□□□ -0.36
CCM2-212ENST00000480382 POTEHQ6S545 545 aa12.83□□□□□ -0.36
CCM2-212ENST00000480382 PAQR9Q6ZVX9 377 aa12.83□□□□□ -0.36
CCM2-212ENST00000480382 GAREM2Q75VX8 874 aa12.83□□□□□ -0.36
CCM2-212ENST00000480382 FUKQ8N0W3 1084 aa12.83□□□□□ -0.36
CCM2-212ENST00000480382 CRYBG2Q8N1P7 616 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms