RNA–Protein interactions for RNA: ENST00000479712.1

UPF3A-205, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2

Gene UPF3A, Length 423 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-205ENST00000479712 CD320Q9NPF0 282 aa6.38□□□□□ -1.39
UPF3A-205ENST00000479712 PIH1D1Q9NWS0 290 aaKnown RBP6.38□□□□□ -1.39
UPF3A-205ENST00000479712 RALYQ9UKM9 306 aaKnown RBP6.38□□□□□ -1.39
UPF3A-205ENST00000479712 ZNF609O15014 1411 aa6.38□□□□□ -1.39
UPF3A-205ENST00000479712 ATRXP46100 2492 aa6.37□□□□□ -1.39
UPF3A-205ENST00000479712 MRC1P22897 1456 aa6.37□□□□□ -1.39
UPF3A-205ENST00000479712 KDRP35968 1356 aa6.37□□□□□ -1.39
UPF3A-205ENST00000479712 ATRNL1Q5VV63 1379 aa6.37□□□□□ -1.39
UPF3A-205ENST00000479712 ABHD14A-ACY1A0A1B0GW23 586 aa6.37□□□□□ -1.39
UPF3A-205ENST00000479712 ISM1B1AKI9 464 aa6.37□□□□□ -1.39
UPF3A-205ENST00000479712 MYO1FO00160 1098 aa6.37□□□□□ -1.39
UPF3A-205ENST00000479712 FOXN3O00409 490 aaPredicted RBP6.37□□□□□ -1.39
UPF3A-205ENST00000479712 CREB3O43889 395 aa6.37□□□□□ -1.39
UPF3A-205ENST00000479712 C1QTNF9P0C862 333 aa6.37□□□□□ -1.39
UPF3A-205ENST00000479712 FLT3LGP49771 235 aa6.37□□□□□ -1.39
UPF3A-205ENST00000479712 GZMKP49863 264 aa6.37□□□□□ -1.39
UPF3A-205ENST00000479712 NPEPPSP55786 919 aa6.37□□□□□ -1.39
UPF3A-205ENST00000479712 APBA1Q02410 837 aa6.37□□□□□ -1.39
UPF3A-205ENST00000479712 CNGA2Q16280 664 aa6.37□□□□□ -1.39
UPF3A-205ENST00000479712 RNF151Q2KHN1 245 aa6.37□□□□□ -1.39
UPF3A-205ENST00000479712 FAM83BQ5T0W9 1011 aa6.37□□□□□ -1.39
UPF3A-205ENST00000479712 KBTBD2Q8IY47 623 aa6.37□□□□□ -1.39
UPF3A-205ENST00000479712 DEPTORQ8TB45 409 aa6.37□□□□□ -1.39
UPF3A-205ENST00000479712 RABGGTAQ92696 567 aa6.37□□□□□ -1.39
UPF3A-205ENST00000479712 MRGPRX1Q96LB2 322 aa6.37□□□□□ -1.39
UPF3A-205ENST00000479712 C1orf43Q9BWL3 253 aa6.37□□□□□ -1.39
UPF3A-205ENST00000479712 MRPL46Q9H2W6 279 aaKnown RBP6.37□□□□□ -1.39
UPF3A-205ENST00000479712 IL23AQ9NPF7 189 aa6.37□□□□□ -1.39
UPF3A-205ENST00000479712 GNL3LQ9NVN8 582 aaKnown RBP6.37□□□□□ -1.39
UPF3A-205ENST00000479712 NCOR1O75376 2440 aa6.37□□□□□ -1.39
UPF3A-205ENST00000479712 TCF20Q9UGU0 1960 aaKnown RBP6.37□□□□□ -1.39
UPF3A-205ENST00000479712 MROH6A6NGR9 719 aa6.36□□□□□ -1.39
UPF3A-205ENST00000479712 TBX3O15119 743 aa6.36□□□□□ -1.39
UPF3A-205ENST00000479712 TCEA3O75764 348 aa6.36□□□□□ -1.39
UPF3A-205ENST00000479712 AHSGP02765 367 aa6.36□□□□□ -1.39
UPF3A-205ENST00000479712 TNFSF4P23510 183 aa6.36□□□□□ -1.39
UPF3A-205ENST00000479712 MAGEA10P43363 369 aaPredicted RBP6.36□□□□□ -1.39
UPF3A-205ENST00000479712 TRAPPC10P48553 1259 aa6.36□□□□□ -1.39
UPF3A-205ENST00000479712 PIK3CGP48736 1102 aa6.36□□□□□ -1.39
UPF3A-205ENST00000479712 LINC00310P59036 64 aa6.36□□□□□ -1.39
UPF3A-205ENST00000479712 PTH1RQ03431 593 aa6.36□□□□□ -1.39
UPF3A-205ENST00000479712 BTKQ06187 659 aa6.36□□□□□ -1.39
UPF3A-205ENST00000479712 ZRSR2Q15696 482 aaKnown RBP6.36□□□□□ -1.39
UPF3A-205ENST00000479712 PABPC1LQ4VXU2 614 aaKnown RBP6.36□□□□□ -1.39
UPF3A-205ENST00000479712 FAM47AQ5JRC9 791 aa6.36□□□□□ -1.39
UPF3A-205ENST00000479712 MFSD14BQ5SR56 506 aa6.36□□□□□ -1.39
UPF3A-205ENST00000479712 FAM109BQ6ICB4 259 aaPredicted RBP6.36□□□□□ -1.39
UPF3A-205ENST00000479712 FAM124AQ86V42 546 aa6.36□□□□□ -1.39
UPF3A-205ENST00000479712 LINC01356Q8N9X3 169 aa6.36□□□□□ -1.39
UPF3A-205ENST00000479712 TNPO1Q92973 898 aaKnown RBP6.36□□□□□ -1.39
UPF3A-205ENST00000479712 SLC38A3Q99624 504 aa6.36□□□□□ -1.39
UPF3A-205ENST00000479712 SELENOOQ9BVL4 669 aa6.36□□□□□ -1.39
UPF3A-205ENST00000479712 ENKD1Q9H0I2 346 aa6.36□□□□□ -1.39
UPF3A-205ENST00000479712 PNPLA8Q9NP80 782 aa6.36□□□□□ -1.39
UPF3A-205ENST00000479712 SLAMF7Q9NQ25 335 aa6.36□□□□□ -1.39
UPF3A-205ENST00000479712 SIDT1Q9NXL6 827 aaKnown RBP6.36□□□□□ -1.39
UPF3A-205ENST00000479712 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.36□□□□□ -1.39
UPF3A-205ENST00000479712 CPNE7Q9UBL6 633 aa6.36□□□□□ -1.39
UPF3A-205ENST00000479712 SLC4A7Q9Y6M7 1214 aa6.36□□□□□ -1.39
UPF3A-205ENST00000479712 ALPK3Q96L96 1907 aa6.36□□□□□ -1.39
UPF3A-205ENST00000479712 ARFGEF2Q9Y6D5 1785 aa6.36□□□□□ -1.39
UPF3A-205ENST00000479712 TTC21BQ7Z4L5 1316 aa6.35□□□□□ -1.39
UPF3A-205ENST00000479712 PCDH11XQ9BZA7 1347 aa6.35□□□□□ -1.39
UPF3A-205ENST00000479712 PCDH11YQ9BZA8 1340 aa6.35□□□□□ -1.39
UPF3A-205ENST00000479712 F5H423 210 aaPredicted RBP6.35□□□□□ -1.39
UPF3A-205ENST00000479712 GRM6O15303 877 aa6.35□□□□□ -1.39
UPF3A-205ENST00000479712 CYP27B1O15528 508 aa6.35□□□□□ -1.39
UPF3A-205ENST00000479712 SLC26A4O43511 780 aa6.35□□□□□ -1.39
UPF3A-205ENST00000479712 GNAI3P08754 354 aa6.35□□□□□ -1.39
UPF3A-205ENST00000479712 MTHFD1P11586 935 aaKnown RBP6.35□□□□□ -1.39
UPF3A-205ENST00000479712 ATP5JP18859 108 aa6.35□□□□□ -1.39
UPF3A-205ENST00000479712 SUMO3P55854 103 aaPredicted RBP6.35□□□□□ -1.39
UPF3A-205ENST00000479712 SOX8P57073 446 aa6.35□□□□□ -1.39
UPF3A-205ENST00000479712 GNAI1P63096 354 aa6.35□□□□□ -1.39
UPF3A-205ENST00000479712 FMO1Q01740 532 aa6.35□□□□□ -1.39
UPF3A-205ENST00000479712 ZNF543Q08ER8 600 aa6.35□□□□□ -1.39
UPF3A-205ENST00000479712 KCNA10Q16322 511 aa6.35□□□□□ -1.39
UPF3A-205ENST00000479712 VMACQ2NL98 169 aa6.35□□□□□ -1.39
UPF3A-205ENST00000479712 DACT2Q5SW24 774 aa6.35□□□□□ -1.39
UPF3A-205ENST00000479712 OTUD7BQ6GQQ9 843 aa6.35□□□□□ -1.39
UPF3A-205ENST00000479712 ERAP2Q6P179 960 aa6.35□□□□□ -1.39
UPF3A-205ENST00000479712 MOB2Q70IA6 237 aa6.35□□□□□ -1.39
UPF3A-205ENST00000479712 UBE2Q1Q7Z7E8 422 aa6.35□□□□□ -1.39
UPF3A-205ENST00000479712 ADGRE4PQ86SQ3 457 aa6.35□□□□□ -1.39
UPF3A-205ENST00000479712 PPM1EQ8WY54 764 aa6.35□□□□□ -1.39
UPF3A-205ENST00000479712 CFHR4Q92496 578 aa6.35□□□□□ -1.39
UPF3A-205ENST00000479712 SUCLG2Q96I99 432 aa6.35□□□□□ -1.39
UPF3A-205ENST00000479712 UNKQ9C0B0 810 aaKnown RBP6.35□□□□□ -1.39
UPF3A-205ENST00000479712 KCNH6Q9H252 994 aa6.35□□□□□ -1.39
UPF3A-205ENST00000479712 EPC1Q9H2F5 836 aa6.35□□□□□ -1.39
UPF3A-205ENST00000479712 PPCSQ9HAB8 311 aa6.35□□□□□ -1.39
UPF3A-205ENST00000479712 ARFGAP3Q9NP61 516 aa6.35□□□□□ -1.39
UPF3A-205ENST00000479712 STARD7Q9NQZ5 370 aa6.35□□□□□ -1.39
UPF3A-205ENST00000479712 SLC23A1Q9UHI7 598 aa6.35□□□□□ -1.39
UPF3A-205ENST00000479712 PGAP2Q9UHJ9 254 aa6.35□□□□□ -1.39
UPF3A-205ENST00000479712 UBE2QL1A1L167 161 aa6.34□□□□□ -1.39
UPF3A-205ENST00000479712 POM121BA6NF01 834 aa6.34□□□□□ -1.39
UPF3A-205ENST00000479712 CXorf49A8MYA2 514 aaPredicted RBP6.34□□□□□ -1.39
UPF3A-205ENST00000479712 KIAA0391O15091 583 aaKnown RBP6.34□□□□□ -1.39
UPF3A-205ENST00000479712 NCK2O43639 380 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms