RNA–Protein interactions for RNA: ENST00000479501.5

COL20A1-206, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 4,536 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-206ENST00000479501 AGAP3Q96P47 875 aa14.98□□□□□ -0.01
COL20A1-206ENST00000479501 HAUS8Q9BT25 410 aa14.98□□□□□ -0.01
COL20A1-206ENST00000479501 GEMIN8Q9NWZ8 242 aaKnown RBP14.98□□□□□ -0.01
COL20A1-206ENST00000479501 UBQLN1Q9UMX0 589 aaKnown RBP14.98□□□□□ -0.01
COL20A1-206ENST00000479501 CCT8L1PA6NM43 557 aa14.97□□□□□ -0.01
COL20A1-206ENST00000479501 SPAG6O75602 509 aa14.97□□□□□ -0.01
COL20A1-206ENST00000479501 RARAP10276 462 aa14.97□□□□□ -0.01
COL20A1-206ENST00000479501 INSRRP14616 1297 aa14.97□□□□□ -0.01
COL20A1-206ENST00000479501 CTCFP49711 727 aaPredicted RBP14.97□□□□□ -0.01
COL20A1-206ENST00000479501 PTPN11Q06124 597 aaPredicted RBP14.97□□□□□ -0.01
COL20A1-206ENST00000479501 KIZQ2M2Z5 673 aa14.97□□□□□ -0.01
COL20A1-206ENST00000479501 DCAF6Q58WW2 860 aa14.97□□□□□ -0.01
COL20A1-206ENST00000479501 KLC3Q6P597 504 aa14.97□□□□□ -0.01
COL20A1-206ENST00000479501 C4orf50Q6ZRC1 276 aa14.97□□□□□ -0.01
COL20A1-206ENST00000479501 BRSK2Q8IWQ3 736 aa14.97□□□□□ -0.01
COL20A1-206ENST00000479501 TSEN2Q8NCE0 465 aaKnown RBP14.97□□□□□ -0.01
COL20A1-206ENST00000479501 AFG1LQ8WV93 481 aa14.97□□□□□ -0.01
COL20A1-206ENST00000479501 KRT35Q92764 455 aa14.97□□□□□ -0.01
COL20A1-206ENST00000479501 OLFM3Q96PB7 478 aa14.97□□□□□ -0.01
COL20A1-206ENST00000479501 DNAJC18Q9H819 358 aa14.97□□□□□ -0.01
COL20A1-206ENST00000479501 ATP9BO43861 1147 aa14.97□□□□□ -0.01
COL20A1-206ENST00000479501 DCAF4L1Q3SXM0 396 aa14.97□□□□□ -0.01
COL20A1-206ENST00000479501 SV2CQ496J9 727 aa14.97□□□□□ -0.01
COL20A1-206ENST00000479501 CYB5D1Q6P9G0 228 aa14.97□□□□□ -0.01
COL20A1-206ENST00000479501 APTXQ7Z2E3 356 aaKnown RBP14.97□□□□□ -0.01
COL20A1-206ENST00000479501 SLC51AQ86UW1 340 aa14.97□□□□□ -0.01
COL20A1-206ENST00000479501 CD302Q8IX05 232 aa14.97□□□□□ -0.01
COL20A1-206ENST00000479501 RAPGEF5Q92565 580 aa14.97□□□□□ -0.01
COL20A1-206ENST00000479501 KLF6Q99612 283 aaPredicted RBP14.97□□□□□ -0.01
COL20A1-206ENST00000479501 IKZF4Q9H2S9 585 aa14.97□□□□□ -0.01
COL20A1-206ENST00000479501 FAM96AQ9H5X1 160 aa14.97□□□□□ -0.01
COL20A1-206ENST00000479501 AVENQ9NQS1 362 aaPredicted RBP14.97□□□□□ -0.01
COL20A1-206ENST00000479501 ZNF263O14978 683 aa14.97□□□□□ -0.01
COL20A1-206ENST00000479501 HSD17B4P51659 736 aa14.97□□□□□ -0.01
COL20A1-206ENST00000479501 ITGB3BPQ13352 177 aaPredicted RBP14.97□□□□□ -0.01
COL20A1-206ENST00000479501 EFHC1Q5JVL4 640 aa14.97□□□□□ -0.01
COL20A1-206ENST00000479501 CATSPERGQ6ZRH7 1159 aa14.97□□□□□ -0.01
COL20A1-206ENST00000479501 RGS9BPQ6ZS82 235 aa14.97□□□□□ -0.01
COL20A1-206ENST00000479501 RFX8Q6ZV50 586 aa14.97□□□□□ -0.01
COL20A1-206ENST00000479501 TMC3Q7Z5M5 1100 aa14.97□□□□□ -0.01
COL20A1-206ENST00000479501 ACOT1Q86TX2 421 aa14.97□□□□□ -0.01
COL20A1-206ENST00000479501 RYBPQ8N488 228 aaPredicted RBP14.97□□□□□ -0.01
COL20A1-206ENST00000479501 EMC1Q8N766 993 aa14.97□□□□□ -0.01
COL20A1-206ENST00000479501 TRIM62Q9BVG3 475 aa14.97□□□□□ -0.01
COL20A1-206ENST00000479501 UPF3AQ9H1J1 476 aaKnown RBP14.97□□□□□ -0.01
COL20A1-206ENST00000479501 PORCNQ9H237 461 aa14.97□□□□□ -0.01
COL20A1-206ENST00000479501 SCN11AQ9UI33 1791 aa14.97□□□□□ -0.01
COL20A1-206ENST00000479501 ARFGEF2Q9Y6D5 1785 aa14.97□□□□□ -0.01
COL20A1-206ENST00000479501 BTNL10A8MVZ5 291 aa14.96□□□□□ -0.01
COL20A1-206ENST00000479501 H3BRB1 525 aa14.96□□□□□ -0.01
COL20A1-206ENST00000479501 M0R2N6 131 aa14.96□□□□□ -0.01
COL20A1-206ENST00000479501 TLR2O60603 784 aa14.96□□□□□ -0.01
COL20A1-206ENST00000479501 EEF1DP29692 281 aaKnown RBP14.96□□□□□ -0.01
COL20A1-206ENST00000479501 OTUD4Q01804 1114 aaKnown RBP14.96□□□□□ -0.01
COL20A1-206ENST00000479501 TUT1Q9H6E5 874 aaKnown RBP14.96□□□□□ -0.01
COL20A1-206ENST00000479501 PPME1Q9Y570 386 aa14.96□□□□□ -0.01
COL20A1-206ENST00000479501 RPS6KA5O75582 802 aa14.96□□□□□ -0.01
COL20A1-206ENST00000479501 TAF6P49848 677 aa14.96□□□□□ -0.01
COL20A1-206ENST00000479501 PTK7Q13308 1070 aa14.96□□□□□ -0.01
COL20A1-206ENST00000479501 RABGAP1LQ5R372 815 aa14.96□□□□□ -0.01
COL20A1-206ENST00000479501 SPOCD1Q6ZMY3 1216 aa14.96□□□□□ -0.01
COL20A1-206ENST00000479501 DTX3LQ8TDB6 740 aa14.96□□□□□ -0.01
COL20A1-206ENST00000479501 NRBF2Q96F24 287 aa14.96□□□□□ -0.01
COL20A1-206ENST00000479501 LBHD1Q9BQE6 289 aaPredicted RBP14.96□□□□□ -0.01
COL20A1-206ENST00000479501 PLEKHA5Q9HAU0 1116 aa14.96□□□□□ -0.01
COL20A1-206ENST00000479501 ARHGAP10A1A4S6 786 aa14.96□□□□□ -0.01
COL20A1-206ENST00000479501 YDJCA8MPS7 323 aa14.96□□□□□ -0.01
COL20A1-206ENST00000479501 MYCP01106 439 aaPredicted RBP14.96□□□□□ -0.01
COL20A1-206ENST00000479501 ZCWPW2Q504Y3 356 aa14.96□□□□□ -0.01
COL20A1-206ENST00000479501 ANO5Q75V66 913 aa14.96□□□□□ -0.01
COL20A1-206ENST00000479501 FAM71AQ8IYT1 594 aa14.96□□□□□ -0.01
COL20A1-206ENST00000479501 ASCC2Q9H1I8 757 aaPredicted RBP14.96□□□□□ -0.01
COL20A1-206ENST00000479501 CYP3A43Q9HB55 503 aa14.96□□□□□ -0.01
COL20A1-206ENST00000479501 TMEM51Q9NW97 253 aa14.96□□□□□ -0.01
COL20A1-206ENST00000479501 COL1A1P02452 1464 aaPredicted RBP14.96□□□□□ -0.02
COL20A1-206ENST00000479501 ACKR2O00590 384 aa14.96□□□□□ -0.02
COL20A1-206ENST00000479501 MYBL2P10244 700 aa14.96□□□□□ -0.02
COL20A1-206ENST00000479501 PNPLA4P41247 253 aa14.96□□□□□ -0.02
COL20A1-206ENST00000479501 RAP1GAPP47736 663 aa14.96□□□□□ -0.02
COL20A1-206ENST00000479501 ERFP50548 548 aa14.96□□□□□ -0.02
COL20A1-206ENST00000479501 IL1RL1Q01638 556 aa14.96□□□□□ -0.02
COL20A1-206ENST00000479501 SLC35G1Q2M3R5 365 aa14.96□□□□□ -0.02
COL20A1-206ENST00000479501 C9orf131Q5VYM1 1079 aa14.96□□□□□ -0.02
COL20A1-206ENST00000479501 HGSNATQ68CP4 663 aa14.96□□□□□ -0.02
COL20A1-206ENST00000479501 AMIGO3Q86WK7 504 aa14.96□□□□□ -0.02
COL20A1-206ENST00000479501 KIF2BQ8N4N8 673 aa14.96□□□□□ -0.02
COL20A1-206ENST00000479501 TRAPPC12Q8WVT3 735 aa14.96□□□□□ -0.02
COL20A1-206ENST00000479501 SHC3Q92529 594 aa14.96□□□□□ -0.02
COL20A1-206ENST00000479501 KLK14Q9P0G3 267 aa14.96□□□□□ -0.02
COL20A1-206ENST00000479501 HNRNPCP07910 306 aaKnown RBP eCLIP14.95□□□□□ -0.02
COL20A1-206ENST00000479501 CYP2C8P10632 490 aa14.95□□□□□ -0.02
COL20A1-206ENST00000479501 UBA1P22314 1058 aaKnown RBP14.95□□□□□ -0.02
COL20A1-206ENST00000479501 LRRC34Q8IZ02 419 aa14.95□□□□□ -0.02
COL20A1-206ENST00000479501 GPC2Q8N158 579 aa14.95□□□□□ -0.02
COL20A1-206ENST00000479501 EIF1ADQ8N9N8 165 aaKnown RBP14.95□□□□□ -0.02
COL20A1-206ENST00000479501 ACTL9Q8TC94 416 aa14.95□□□□□ -0.02
COL20A1-206ENST00000479501 OPTNQ96CV9 577 aa14.95□□□□□ -0.02
COL20A1-206ENST00000479501 TMEM176AQ96HP8 235 aa14.95□□□□□ -0.02
COL20A1-206ENST00000479501 TTYH3Q9C0H2 523 aa14.95□□□□□ -0.02
COL20A1-206ENST00000479501 SLC38A7Q9NVC3 462 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms