RNA–Protein interactions for RNA: ENST00000479051.1

VARS-224, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 612 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-224ENST00000479051 EPHA5P54756 1037 aa21.81■■□□□ 1.08
VARS-224ENST00000479051 ACOT1Q86TX2 421 aa21.81■■□□□ 1.08
VARS-224ENST00000479051 SCN4BQ8IWT1 228 aa21.81■■□□□ 1.08
VARS-224ENST00000479051 GIPC2Q8TF65 315 aa21.81■■□□□ 1.08
VARS-224ENST00000479051 CEP295NLQ96MC4 621 aa21.81■■□□□ 1.08
VARS-224ENST00000479051 GCNAQ96QF7 691 aa21.81■■□□□ 1.08
VARS-224ENST00000479051 MYADMQ96S97 322 aa21.81■■□□□ 1.08
VARS-224ENST00000479051 LPIN3Q9BQK8 851 aa21.81■■□□□ 1.08
VARS-224ENST00000479051 MED10Q9BTT4 135 aa21.81■■□□□ 1.08
VARS-224ENST00000479051 NT5C1AQ9BXI3 368 aa21.81■■□□□ 1.08
VARS-224ENST00000479051 NAT10Q9H0A0 1025 aaKnown RBP21.81■■□□□ 1.08
VARS-224ENST00000479051 EPS15L1Q9UBC2 864 aa21.81■■□□□ 1.08
VARS-224ENST00000479051 NFE2L3Q9Y4A8 694 aa21.81■■□□□ 1.08
VARS-224ENST00000479051 NCOR1O75376 2440 aa21.8■■□□□ 1.08
VARS-224ENST00000479051 TRIM66O15016 1216 aa21.8■■□□□ 1.08
VARS-224ENST00000479051 LRRN2O75325 713 aa21.8■■□□□ 1.08
VARS-224ENST00000479051 BDNFP23560 247 aa21.8■■□□□ 1.08
VARS-224ENST00000479051 GRIK1P39086 918 aa21.8■■□□□ 1.08
VARS-224ENST00000479051 TYRO3Q06418 890 aa21.8■■□□□ 1.08
VARS-224ENST00000479051 CUL2Q13617 745 aa21.8■■□□□ 1.08
VARS-224ENST00000479051 MAN2A1Q16706 1144 aa21.8■■□□□ 1.08
VARS-224ENST00000479051 CCDC142Q17RM4 750 aa21.8■■□□□ 1.08
VARS-224ENST00000479051 SKOR2Q2VWA4 1001 aaPredicted RBP21.8■■□□□ 1.08
VARS-224ENST00000479051 IRF2BP1Q8IU81 584 aa21.8■■□□□ 1.08
VARS-224ENST00000479051 HS6ST3Q8IZP7 471 aa21.8■■□□□ 1.08
VARS-224ENST00000479051 CRYBG2Q8N1P7 616 aa21.8■■□□□ 1.08
VARS-224ENST00000479051 ITFG1Q8TB96 612 aa21.8■■□□□ 1.08
VARS-224ENST00000479051 FGF13Q92913 245 aa21.8■■□□□ 1.08
VARS-224ENST00000479051 TATDN2Q93075 761 aa21.8■■□□□ 1.08
VARS-224ENST00000479051 GDE1Q9NZC3 331 aa21.8■■□□□ 1.08
VARS-224ENST00000479051 LIMD1Q9UGP4 676 aa21.8■■□□□ 1.08
VARS-224ENST00000479051 C5orf42Q9H799 3197 aa21.8■■□□□ 1.08
VARS-224ENST00000479051 CILPO75339 1184 aa21.79■■□□□ 1.08
VARS-224ENST00000479051 LAMP2P13473 410 aa21.79■■□□□ 1.08
VARS-224ENST00000479051 ALADP13716 330 aa21.79■■□□□ 1.08
VARS-224ENST00000479051 LRMPQ12912 555 aa21.79■■□□□ 1.08
VARS-224ENST00000479051 DDR2Q16832 855 aa21.79■■□□□ 1.08
VARS-224ENST00000479051 PRSS36Q5K4E3 855 aa21.79■■□□□ 1.08
VARS-224ENST00000479051 ING5Q8WYH8 240 aa21.79■■□□□ 1.08
VARS-224ENST00000479051 NXPE3Q969Y0 559 aa21.79■■□□□ 1.08
VARS-224ENST00000479051 CISHQ9NSE2 258 aa21.79■■□□□ 1.08
VARS-224ENST00000479051 EHD2Q9NZN4 543 aa21.79■■□□□ 1.08
VARS-224ENST00000479051 IGSF9Q9P2J2 1179 aa21.79■■□□□ 1.08
VARS-224ENST00000479051 KCNJ18B7U540 433 aa21.78■■□□□ 1.08
VARS-224ENST00000479051 PRKCSHP14314 528 aaPredicted RBP21.78■■□□□ 1.08
VARS-224ENST00000479051 EEF1GP26641 437 aaKnown RBP21.78■■□□□ 1.08
VARS-224ENST00000479051 CDC25CP30307 473 aa21.78■■□□□ 1.08
VARS-224ENST00000479051 KCNJ12Q14500 433 aa21.78■■□□□ 1.08
VARS-224ENST00000479051 SLC5A9Q2M3M2 681 aa21.78■■□□□ 1.08
VARS-224ENST00000479051 C11orf57Q6ZUT1 292 aaPredicted RBP21.78■■□□□ 1.08
VARS-224ENST00000479051 MTSS1LQ765P7 747 aa21.78■■□□□ 1.08
VARS-224ENST00000479051 NPAS3Q8IXF0 933 aa21.78■■□□□ 1.08
VARS-224ENST00000479051 EHBP1Q8NDI1 1231 aa21.78■■□□□ 1.08
VARS-224ENST00000479051 B3GNT5Q9BYG0 378 aa21.78■■□□□ 1.08
VARS-224ENST00000479051 GCNT4Q9P109 453 aa21.78■■□□□ 1.08
VARS-224ENST00000479051 UXTQ9UBK9 157 aaPredicted RBP21.78■■□□□ 1.08
VARS-224ENST00000479051 HMGXB4Q9UGU5 601 aa21.78■■□□□ 1.08
VARS-224ENST00000479051 DOCK6Q96HP0 2047 aa21.77■■□□□ 1.08
VARS-224ENST00000479051 DCXO43602 365 aa21.77■■□□□ 1.08
VARS-224ENST00000479051 TPM2P07951 284 aa21.77■■□□□ 1.08
VARS-224ENST00000479051 CEBPBP17676 345 aa21.77■■□□□ 1.08
VARS-224ENST00000479051 GPR15P49685 360 aa21.77■■□□□ 1.08
VARS-224ENST00000479051 MYL5Q02045 173 aa21.77■■□□□ 1.08
VARS-224ENST00000479051 ORC1Q13415 861 aa21.77■■□□□ 1.08
VARS-224ENST00000479051 ARHGAP15Q53QZ3 475 aa21.77■■□□□ 1.08
VARS-224ENST00000479051 HSP90AA4PQ58FG1 418 aa21.77■■□□□ 1.08
VARS-224ENST00000479051 GBP6Q6ZN66 633 aa21.77■■□□□ 1.08
VARS-224ENST00000479051 FAM35AQ86V20 835 aa21.77■■□□□ 1.08
VARS-224ENST00000479051 TMC8Q8IU68 726 aa21.77■■□□□ 1.08
VARS-224ENST00000479051 PPM1KQ8N3J5 372 aa21.77■■□□□ 1.08
VARS-224ENST00000479051 GPR152Q8TDT2 470 aa21.77■■□□□ 1.08
VARS-224ENST00000479051 TCEAL4Q96EI5 215 aa21.77■■□□□ 1.08
VARS-224ENST00000479051 SMARCD1Q96GM5 515 aa21.77■■□□□ 1.08
VARS-224ENST00000479051 SPATA17Q96L03 361 aa21.77■■□□□ 1.08
VARS-224ENST00000479051 ARID3AQ99856 593 aa21.77■■□□□ 1.08
VARS-224ENST00000479051 TUBGCP2Q9BSJ2 902 aa21.77■■□□□ 1.08
VARS-224ENST00000479051 LRRC3Q9BY71 257 aa21.77■■□□□ 1.08
VARS-224ENST00000479051 ZNF518BQ9C0D4 1074 aa21.77■■□□□ 1.08
VARS-224ENST00000479051 GPR88Q9GZN0 384 aa21.77■■□□□ 1.08
VARS-224ENST00000479051 INTS2Q9H0H0 1204 aaKnown RBP21.77■■□□□ 1.08
VARS-224ENST00000479051 SAMSN1Q9NSI8 373 aaKnown RBP21.77■■□□□ 1.08
VARS-224ENST00000479051 MUTYHQ9UIF7 546 aa21.77■■□□□ 1.08
VARS-224ENST00000479051 MAGED2Q9UNF1 606 aaPredicted RBP21.77■■□□□ 1.08
VARS-224ENST00000479051 GTPBP10A4D1E9 387 aaKnown RBP21.76■■□□□ 1.07
VARS-224ENST00000479051 SLC38A8A6NNN8 435 aa21.76■■□□□ 1.07
VARS-224ENST00000479051 GABRR2P28476 465 aa21.76■■□□□ 1.07
VARS-224ENST00000479051 PTPN21Q16825 1174 aa21.76■■□□□ 1.07
VARS-224ENST00000479051 TCP11X2Q5H9J9 407 aa21.76■■□□□ 1.07
VARS-224ENST00000479051 SDHAF4Q5VUM1 108 aa21.76■■□□□ 1.07
VARS-224ENST00000479051 ANKRD20A12PQ8NF67 263 aa21.76■■□□□ 1.07
VARS-224ENST00000479051 MCRS1Q96EZ8 462 aa21.76■■□□□ 1.07
VARS-224ENST00000479051 TMEM176AQ96HP8 235 aa21.76■■□□□ 1.07
VARS-224ENST00000479051 C8orf48Q96LL4 319 aa21.76■■□□□ 1.07
VARS-224ENST00000479051 FAM81BQ96LP2 452 aa21.76■■□□□ 1.07
VARS-224ENST00000479051 ATXN3LQ9H3M9 355 aa21.76■■□□□ 1.07
VARS-224ENST00000479051 SLITRK6Q9H5Y7 841 aa21.76■■□□□ 1.07
VARS-224ENST00000479051 ZNF334Q9HCZ1 680 aaPredicted RBP21.76■■□□□ 1.07
VARS-224ENST00000479051 FAM49BQ9NUQ9 324 aa21.76■■□□□ 1.07
VARS-224ENST00000479051 SORCS3Q9UPU3 1222 aa21.76■■□□□ 1.07
VARS-224ENST00000479051 NOTCH4Q99466 2003 aa21.75■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms