RNA–Protein interactions for RNA: ENST00000478909.5

CMSS1-203, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 5

Gene CMSS1, Length 753 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-203ENST00000478909 KRIT1O00522 736 aa6.51□□□□□ -1.37
CMSS1-203ENST00000478909 THAP12O43422 761 aa6.51□□□□□ -1.37
CMSS1-203ENST00000478909 ADCY3O60266 1144 aa6.51□□□□□ -1.37
CMSS1-203ENST00000478909 BUB1BO60566 1050 aaPredicted RBP6.51□□□□□ -1.37
CMSS1-203ENST00000478909 TOM1L1O75674 476 aa6.51□□□□□ -1.37
CMSS1-203ENST00000478909 FTCDO95954 541 aa6.51□□□□□ -1.37
CMSS1-203ENST00000478909 CYP11A1P05108 521 aa6.51□□□□□ -1.37
CMSS1-203ENST00000478909 ADRB2P07550 413 aa6.51□□□□□ -1.37
CMSS1-203ENST00000478909 ZBTB48P10074 688 aaPredicted RBP6.51□□□□□ -1.37
CMSS1-203ENST00000478909 CYP11B1P15538 503 aa6.51□□□□□ -1.37
CMSS1-203ENST00000478909 UBA1P22314 1058 aaKnown RBP6.51□□□□□ -1.37
CMSS1-203ENST00000478909 CTNNA2P26232 953 aa6.51□□□□□ -1.37
CMSS1-203ENST00000478909 CTNNA1P35221 906 aaKnown RBP6.51□□□□□ -1.37
CMSS1-203ENST00000478909 HSPA9P38646 679 aaKnown RBP6.51□□□□□ -1.37
CMSS1-203ENST00000478909 FNTAP49354 379 aa6.51□□□□□ -1.37
CMSS1-203ENST00000478909 STAT5BP51692 787 aa6.51□□□□□ -1.37
CMSS1-203ENST00000478909 EIF3BP55884 814 aaKnown RBP6.51□□□□□ -1.37
CMSS1-203ENST00000478909 FKBP1BP68106 108 aa6.51□□□□□ -1.37
CMSS1-203ENST00000478909 CDC42EP1Q00587 391 aa6.51□□□□□ -1.37
CMSS1-203ENST00000478909 TAP1Q03518 808 aa6.51□□□□□ -1.37
CMSS1-203ENST00000478909 SOX4Q06945 474 aaPredicted RBP6.51□□□□□ -1.37
CMSS1-203ENST00000478909 C2orf54Q08AI8 447 aa6.51□□□□□ -1.37
CMSS1-203ENST00000478909 PTP4A2Q12974 167 aa6.51□□□□□ -1.37
CMSS1-203ENST00000478909 PRPF4BQ13523 1007 aaKnown RBP6.51□□□□□ -1.37
CMSS1-203ENST00000478909 PLS1Q14651 629 aa6.51□□□□□ -1.37
CMSS1-203ENST00000478909 KCTD2Q14681 263 aa6.51□□□□□ -1.37
CMSS1-203ENST00000478909 POU4F3Q15319 338 aa6.51□□□□□ -1.37
CMSS1-203ENST00000478909 PCBP1Q15365 356 aaKnown RBP eCLIP6.51□□□□□ -1.37
CMSS1-203ENST00000478909 PLA2G4FQ68DD2 849 aa6.51□□□□□ -1.37
CMSS1-203ENST00000478909 CDPF1Q6NVV7 123 aa6.51□□□□□ -1.37
CMSS1-203ENST00000478909 LEKR1Q6ZMV7 388 aa6.51□□□□□ -1.37
CMSS1-203ENST00000478909 ZNF771Q7L3S4 317 aaPredicted RBP6.51□□□□□ -1.37
CMSS1-203ENST00000478909 APBB1IPQ7Z5R6 666 aaPredicted RBP6.51□□□□□ -1.37
CMSS1-203ENST00000478909 CBWD2Q8IUF1 395 aa6.51□□□□□ -1.37
CMSS1-203ENST00000478909 WDR49Q8IV35 697 aa6.51□□□□□ -1.37
CMSS1-203ENST00000478909 PPM1KQ8N3J5 372 aa6.51□□□□□ -1.37
CMSS1-203ENST00000478909 ARFGAP2Q8N6H7 521 aa6.51□□□□□ -1.37
CMSS1-203ENST00000478909 ATP8B4Q8TF62 1192 aa6.51□□□□□ -1.37
CMSS1-203ENST00000478909 SLCO2A1Q92959 643 aa6.51□□□□□ -1.37
CMSS1-203ENST00000478909 UIMC1Q96RL1 719 aa6.51□□□□□ -1.37
CMSS1-203ENST00000478909 CGRRF1Q99675 332 aa6.51□□□□□ -1.37
CMSS1-203ENST00000478909 ZSWIM1Q9BR11 485 aa6.51□□□□□ -1.37
CMSS1-203ENST00000478909 TRIM56Q9BRZ2 755 aaKnown RBP6.51□□□□□ -1.37
CMSS1-203ENST00000478909 LRRC1Q9BTT6 524 aa6.51□□□□□ -1.37
CMSS1-203ENST00000478909 PACSIN1Q9BY11 444 aa6.51□□□□□ -1.37
CMSS1-203ENST00000478909 MRPL4Q9BYD3 311 aaKnown RBP6.51□□□□□ -1.37
CMSS1-203ENST00000478909 RBCK1Q9BYM8 510 aa6.51□□□□□ -1.37
CMSS1-203ENST00000478909 SPON1Q9HCB6 807 aa6.51□□□□□ -1.37
CMSS1-203ENST00000478909 MRPL47Q9HD33 250 aaKnown RBP6.51□□□□□ -1.37
CMSS1-203ENST00000478909 CALCOCO1Q9P1Z2 691 aa6.51□□□□□ -1.37
CMSS1-203ENST00000478909 CTTNBP2NLQ9P2B4 639 aa6.51□□□□□ -1.37
CMSS1-203ENST00000478909 PPP1R1BQ9UD71 204 aaPredicted RBP6.51□□□□□ -1.37
CMSS1-203ENST00000478909 ADAM21Q9UKJ8 722 aa6.51□□□□□ -1.37
CMSS1-203ENST00000478909 AGO2Q9UKV8 859 aaKnown RBP6.51□□□□□ -1.37
CMSS1-203ENST00000478909 TFR2Q9UP52 801 aa6.51□□□□□ -1.37
CMSS1-203ENST00000478909 COL1A2P08123 1366 aa6.51□□□□□ -1.37
CMSS1-203ENST00000478909 ZSWIM8A7E2V4 1837 aa6.5□□□□□ -1.37
CMSS1-203ENST00000478909 DOCK5Q9H7D0 1870 aa6.5□□□□□ -1.37
CMSS1-203ENST00000478909 DNAJC25-GNG10A0A024R161 153 aa6.5□□□□□ -1.37
CMSS1-203ENST00000478909 IGKV6-21A0A0C4DH24 114 aa6.5□□□□□ -1.37
CMSS1-203ENST00000478909 IQCA1LA6NCM1 817 aa6.5□□□□□ -1.37
CMSS1-203ENST00000478909 HMGB1P1B2RPK0 211 aaPredicted RBP6.5□□□□□ -1.37
CMSS1-203ENST00000478909 MAGEB2O15479 319 aa6.5□□□□□ -1.37
CMSS1-203ENST00000478909 CEP104O60308 925 aa6.5□□□□□ -1.37
CMSS1-203ENST00000478909 ZEB2O60315 1214 aa6.5□□□□□ -1.37
CMSS1-203ENST00000478909 IL18RAPO95256 599 aa6.5□□□□□ -1.37
CMSS1-203ENST00000478909 ECEL1O95672 775 aa6.5□□□□□ -1.37
CMSS1-203ENST00000478909 FTLP02792 175 aaPredicted RBP6.5□□□□□ -1.37
CMSS1-203ENST00000478909 CXCR5P32302 372 aa6.5□□□□□ -1.37
CMSS1-203ENST00000478909 CDR1P51861 262 aa6.5□□□□□ -1.37
CMSS1-203ENST00000478909 SNAPC2Q13487 334 aa6.5□□□□□ -1.37
CMSS1-203ENST00000478909 BIRC3Q13489 604 aa6.5□□□□□ -1.37
CMSS1-203ENST00000478909 TTLL4Q14679 1199 aa6.5□□□□□ -1.37
CMSS1-203ENST00000478909 R3HDM1Q15032 1099 aaKnown RBP6.5□□□□□ -1.37
CMSS1-203ENST00000478909 CYP1B1Q16678 543 aa6.5□□□□□ -1.37
CMSS1-203ENST00000478909 ARHGAP44Q17R89 818 aa6.5□□□□□ -1.37
CMSS1-203ENST00000478909 SEL1L2Q5TEA6 688 aa6.5□□□□□ -1.37
CMSS1-203ENST00000478909 LIN9Q5TKA1 542 aa6.5□□□□□ -1.37
CMSS1-203ENST00000478909 ACAD10Q6JQN1 1059 aa6.5□□□□□ -1.37
CMSS1-203ENST00000478909 SLC39A4Q6P5W5 647 aa6.5□□□□□ -1.37
CMSS1-203ENST00000478909 RUFY4Q6ZNE9 571 aa6.5□□□□□ -1.37
CMSS1-203ENST00000478909 ARMC9Q7Z3E5 817 aa6.5□□□□□ -1.37
CMSS1-203ENST00000478909 PNMA8AQ86V59 439 aaPredicted RBP6.5□□□□□ -1.37
CMSS1-203ENST00000478909 NT5DC4Q86YG4 428 aa6.5□□□□□ -1.37
CMSS1-203ENST00000478909 BRSK2Q8IWQ3 736 aa6.5□□□□□ -1.37
CMSS1-203ENST00000478909 RPUSD2Q8IZ73 545 aaKnown RBP6.5□□□□□ -1.37
CMSS1-203ENST00000478909 METTL13Q8N6R0 699 aa6.5□□□□□ -1.37
CMSS1-203ENST00000478909 FAM76AQ8TAV0 307 aa6.5□□□□□ -1.37
CMSS1-203ENST00000478909 CCHCR1Q8TD31 782 aa6.5□□□□□ -1.37
CMSS1-203ENST00000478909 GRK7Q8WTQ7 553 aa6.5□□□□□ -1.37
CMSS1-203ENST00000478909 FBLIM1Q8WUP2 373 aa6.5□□□□□ -1.37
CMSS1-203ENST00000478909 ALKBH8Q96BT7 664 aaKnown RBP6.5□□□□□ -1.37
CMSS1-203ENST00000478909 WNK4Q96J92 1243 aa6.5□□□□□ -1.37
CMSS1-203ENST00000478909 RNPC3Q96LT9 517 aaKnown RBP6.5□□□□□ -1.37
CMSS1-203ENST00000478909 DMRTB1Q96MA1 342 aa6.5□□□□□ -1.37
CMSS1-203ENST00000478909 TSPAN18Q96SJ8 248 aa6.5□□□□□ -1.37
CMSS1-203ENST00000478909 CEP89Q96ST8 783 aa6.5□□□□□ -1.37
CMSS1-203ENST00000478909 KRT12Q99456 494 aa6.5□□□□□ -1.37
CMSS1-203ENST00000478909 MSTO1Q9BUK6 570 aa6.5□□□□□ -1.37
CMSS1-203ENST00000478909 FAM107BQ9H098 131 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms