RNA–Protein interactions for RNA: ENST00000478603.5

C9orf3-216, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-216ENST00000478603 CCL26Q9Y258 94 aa24.47■■□□□ 1.51
C9orf3-216ENST00000478603 PCDHGA2Q9Y5H1 932 aa24.47■■□□□ 1.51
C9orf3-216ENST00000478603 PTPRDP23468 1912 aa24.46■■□□□ 1.51
C9orf3-216ENST00000478603 ANAPC1Q9H1A4 1944 aa24.46■■□□□ 1.51
C9orf3-216ENST00000478603 CTHP32929 405 aa24.46■■□□□ 1.51
C9orf3-216ENST00000478603 PSMC1P62191 440 aaKnown RBP24.46■■□□□ 1.51
C9orf3-216ENST00000478603 RPL10AP62906 217 aaKnown RBP24.46■■□□□ 1.51
C9orf3-216ENST00000478603 GAS6Q14393 721 aa24.46■■□□□ 1.51
C9orf3-216ENST00000478603 TRAPPC11Q7Z392 1133 aa24.46■■□□□ 1.51
C9orf3-216ENST00000478603 LIMS2Q7Z4I7 341 aa24.46■■□□□ 1.51
C9orf3-216ENST00000478603 CELF5Q8N6W0 485 aaKnown RBP24.46■■□□□ 1.51
C9orf3-216ENST00000478603 CCDC127Q96BQ5 260 aa24.46■■□□□ 1.51
C9orf3-216ENST00000478603 MSANTD3Q96H12 275 aa24.46■■□□□ 1.51
C9orf3-216ENST00000478603 SYT15Q9BQS2 421 aa24.46■■□□□ 1.51
C9orf3-216ENST00000478603 SERTAD1Q9UHV2 236 aa24.46■■□□□ 1.51
C9orf3-216ENST00000478603 WDR87Q6ZQQ6 2873 aa24.45■■□□□ 1.51
C9orf3-216ENST00000478603 TADA3O75528 432 aa24.45■■□□□ 1.5
C9orf3-216ENST00000478603 CST3P01034 146 aaPredicted RBP24.45■■□□□ 1.5
C9orf3-216ENST00000478603 TNNI1P19237 187 aa24.45■■□□□ 1.5
C9orf3-216ENST00000478603 AVPR1AP37288 418 aa24.45■■□□□ 1.5
C9orf3-216ENST00000478603 CYP24A1Q07973 514 aa24.45■■□□□ 1.5
C9orf3-216ENST00000478603 PSMD6Q15008 389 aa24.45■■□□□ 1.5
C9orf3-216ENST00000478603 ATL3Q6DD88 541 aa24.45■■□□□ 1.5
C9orf3-216ENST00000478603 FAM171BQ6P995 826 aa24.45■■□□□ 1.5
C9orf3-216ENST00000478603 DPH6Q7L8W6 267 aa24.45■■□□□ 1.5
C9orf3-216ENST00000478603 RALGPS2Q86X27 583 aaPredicted RBP24.45■■□□□ 1.5
C9orf3-216ENST00000478603 SCN4BQ8IWT1 228 aa24.45■■□□□ 1.5
C9orf3-216ENST00000478603 KIAA2013Q8IYS2 634 aa24.45■■□□□ 1.5
C9orf3-216ENST00000478603 XXYLT1Q8NBI6 393 aa24.45■■□□□ 1.5
C9orf3-216ENST00000478603 MRPS31Q92665 395 aaKnown RBP24.45■■□□□ 1.5
C9orf3-216ENST00000478603 USP13Q92995 863 aaPredicted RBP24.45■■□□□ 1.5
C9orf3-216ENST00000478603 FNBP1Q96RU3 617 aa24.45■■□□□ 1.5
C9orf3-216ENST00000478603 MMS19Q96T76 1030 aa24.45■■□□□ 1.5
C9orf3-216ENST00000478603 CGRRF1Q99675 332 aa24.45■■□□□ 1.5
C9orf3-216ENST00000478603 RCOR1Q9UKL0 485 aa24.45■■□□□ 1.5
C9orf3-216ENST00000478603 CFAP45Q9UL16 551 aa24.45■■□□□ 1.5
C9orf3-216ENST00000478603 ZNF292O60281 2723 aa24.45■■□□□ 1.5
C9orf3-216ENST00000478603 PVALEFA0A1B0GWK0 134 aa24.44■■□□□ 1.5
C9orf3-216ENST00000478603 LILRB5O75023 590 aa24.44■■□□□ 1.5
C9orf3-216ENST00000478603 NOL4O94818 638 aa24.44■■□□□ 1.5
C9orf3-216ENST00000478603 PDGFRBP09619 1106 aa24.44■■□□□ 1.5
C9orf3-216ENST00000478603 TDGF1P13385 188 aa24.44■■□□□ 1.5
C9orf3-216ENST00000478603 PLCB2Q00722 1185 aa24.44■■□□□ 1.5
C9orf3-216ENST00000478603 SATB1Q01826 763 aa24.44■■□□□ 1.5
C9orf3-216ENST00000478603 PON2Q15165 354 aa24.44■■□□□ 1.5
C9orf3-216ENST00000478603 CFAP221Q4G0U5 840 aa24.44■■□□□ 1.5
C9orf3-216ENST00000478603 HS2ST1Q7LGA3 356 aa24.44■■□□□ 1.5
C9orf3-216ENST00000478603 RIN3Q8TB24 985 aa24.44■■□□□ 1.5
C9orf3-216ENST00000478603 RUBCNQ92622 972 aa24.44■■□□□ 1.5
C9orf3-216ENST00000478603 CHAMP1Q96JM3 812 aa24.44■■□□□ 1.5
C9orf3-216ENST00000478603 CRTAC1Q9NQ79 661 aa24.44■■□□□ 1.5
C9orf3-216ENST00000478603 GKN1Q9NS71 199 aa24.44■■□□□ 1.5
C9orf3-216ENST00000478603 THG1LQ9NWX6 298 aaKnown RBP24.44■■□□□ 1.5
C9orf3-216ENST00000478603 ZMYM5Q9UJ78 669 aa24.44■■□□□ 1.5
C9orf3-216ENST00000478603 DDX6P26196 483 aaKnown RBP eCLIP24.43■■□□□ 1.5
C9orf3-216ENST00000478603 BMT2Q1RMZ1 405 aa24.43■■□□□ 1.5
C9orf3-216ENST00000478603 TRIM68Q6AZZ1 485 aa24.43■■□□□ 1.5
C9orf3-216ENST00000478603 C1orf228Q6PIY5 440 aa24.43■■□□□ 1.5
C9orf3-216ENST00000478603 MAMSTRQ6ZN01 415 aa24.43■■□□□ 1.5
C9orf3-216ENST00000478603 Q6ZS52 159 aa24.43■■□□□ 1.5
C9orf3-216ENST00000478603 MON1AQ86VX9 555 aa24.43■■□□□ 1.5
C9orf3-216ENST00000478603 CEP57L1Q8IYX8 460 aa24.43■■□□□ 1.5
C9orf3-216ENST00000478603 MYLPFQ96A32 169 aa24.43■■□□□ 1.5
C9orf3-216ENST00000478603 FUBP3Q96I24 572 aaKnown RBP eCLIP24.43■■□□□ 1.5
C9orf3-216ENST00000478603 MRPL45Q9BRJ2 306 aaKnown RBP24.43■■□□□ 1.5
C9orf3-216ENST00000478603 IER2Q9BTL4 223 aa24.43■■□□□ 1.5
C9orf3-216ENST00000478603 GZF1Q9H116 711 aaPredicted RBP24.43■■□□□ 1.5
C9orf3-216ENST00000478603 TDP1Q9NUW8 608 aa24.43■■□□□ 1.5
C9orf3-216ENST00000478603 UXTQ9UBK9 157 aaPredicted RBP24.43■■□□□ 1.5
C9orf3-216ENST00000478603 CDH9Q9ULB4 789 aa24.43■■□□□ 1.5
C9orf3-216ENST00000478603 ATG2BQ96BY7 2078 aa24.42■■□□□ 1.5
C9orf3-216ENST00000478603 ACTN4O43707 911 aaKnown RBP24.42■■□□□ 1.5
C9orf3-216ENST00000478603 WARSP23381 471 aaKnown RBP24.42■■□□□ 1.5
C9orf3-216ENST00000478603 CCR3P51677 355 aa24.42■■□□□ 1.5
C9orf3-216ENST00000478603 SNRPFP62306 86 aaKnown RBP24.42■■□□□ 1.5
C9orf3-216ENST00000478603 LRRC32Q14392 662 aa24.42■■□□□ 1.5
C9orf3-216ENST00000478603 KNOP1Q1ED39 458 aaKnown RBP24.42■■□□□ 1.5
C9orf3-216ENST00000478603 ITPRIPL2Q3MIP1 535 aa24.42■■□□□ 1.5
C9orf3-216ENST00000478603 ZNF516Q92618 1163 aa24.42■■□□□ 1.5
C9orf3-216ENST00000478603 TRMT2BQ96GJ1 504 aaKnown RBP24.42■■□□□ 1.5
C9orf3-216ENST00000478603 MYRFLQ96LU7 910 aa24.42■■□□□ 1.5
C9orf3-216ENST00000478603 FAM83CQ9BQN1 747 aa24.42■■□□□ 1.5
C9orf3-216ENST00000478603 TRPC7Q9HCX4 862 aa24.42■■□□□ 1.5
C9orf3-216ENST00000478603 HPS4Q9NQG7 708 aa24.42■■□□□ 1.5
C9orf3-216ENST00000478603 MAGEC2Q9UBF1 373 aaPredicted RBP24.42■■□□□ 1.5
C9orf3-216ENST00000478603 NME7Q9Y5B8 376 aa24.42■■□□□ 1.5
C9orf3-216ENST00000478603 KLRC4O43908 158 aa24.41■■□□□ 1.5
C9orf3-216ENST00000478603 SLFN14P0C7P3 912 aa24.41■■□□□ 1.5
C9orf3-216ENST00000478603 BDNFP23560 247 aa24.41■■□□□ 1.5
C9orf3-216ENST00000478603 ID4P47928 161 aa24.41■■□□□ 1.5
C9orf3-216ENST00000478603 CASP4P49662 377 aa24.41■■□□□ 1.5
C9orf3-216ENST00000478603 C4orf50Q6ZRC1 276 aa24.41■■□□□ 1.5
C9orf3-216ENST00000478603 PAGE5Q96GU1 130 aa24.41■■□□□ 1.5
C9orf3-216ENST00000478603 SLC22A12Q96S37 553 aa24.41■■□□□ 1.5
C9orf3-216ENST00000478603 FAM126AQ9BYI3 521 aaPredicted RBP24.41■■□□□ 1.5
C9orf3-216ENST00000478603 EBF3Q9H4W6 596 aa24.41■■□□□ 1.5
C9orf3-216ENST00000478603 SMG5Q9UPR3 1016 aaKnown RBP24.41■■□□□ 1.5
C9orf3-216ENST00000478603 A0A1B0GVL5 298 aa24.4■■□□□ 1.5
C9orf3-216ENST00000478603 OTOL1A6NHN0 477 aaPredicted RBP24.4■■□□□ 1.5
C9orf3-216ENST00000478603 MAGEA11P43364 429 aa24.4■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms