RNA–Protein interactions for RNA: ENST00000478188.5

POLR2B-208, Transcript of RNA polymerase II subunit B, human

TSL 2

Gene POLR2B, Length 3,093 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
POLR2B-208	ENST00000478188	HSP90AA1	P07900	732 aa	Known RBP	4.56	□□□□□ -1.68
POLR2B-208	ENST00000478188	HAPLN1	P10915	354 aa	Predicted RBP	4.56	□□□□□ -1.68
POLR2B-208	ENST00000478188	LAMP2	P13473	410 aa		4.56	□□□□□ -1.68
POLR2B-208	ENST00000478188	YWHAH	Q04917	246 aa	Predicted RBP	4.56	□□□□□ -1.68
POLR2B-208	ENST00000478188	BECN1	Q14457	450 aa		4.56	□□□□□ -1.68
POLR2B-208	ENST00000478188	BMS1	Q14692	1282 aa	Known RBP	4.56	□□□□□ -1.68
POLR2B-208	ENST00000478188	ZACN	Q401N2	412 aa		4.56	□□□□□ -1.68
POLR2B-208	ENST00000478188	SV2C	Q496J9	727 aa		4.56	□□□□□ -1.68
POLR2B-208	ENST00000478188	ATAT1	Q5SQI0	421 aa		4.56	□□□□□ -1.68
POLR2B-208	ENST00000478188	OVOS1	Q6IE37	1185 aa		4.56	□□□□□ -1.68
POLR2B-208	ENST00000478188	CES5A	Q6NT32	575 aa		4.56	□□□□□ -1.68
POLR2B-208	ENST00000478188	TRAPPC11	Q7Z392	1133 aa		4.56	□□□□□ -1.68
POLR2B-208	ENST00000478188	CEP57L1	Q8IYX8	460 aa		4.56	□□□□□ -1.68
POLR2B-208	ENST00000478188	ADSSL1	Q8N142	457 aa		4.56	□□□□□ -1.68
POLR2B-208	ENST00000478188	RSAD2	Q8WXG1	361 aa		4.56	□□□□□ -1.68
POLR2B-208	ENST00000478188	FGF14	Q92915	247 aa		4.56	□□□□□ -1.68
POLR2B-208	ENST00000478188	CHFR	Q96EP1	664 aa		4.56	□□□□□ -1.68
POLR2B-208	ENST00000478188	PLA2G2F	Q9BZM2	168 aa		4.56	□□□□□ -1.68
POLR2B-208	ENST00000478188	DLGAP2	Q9P1A6	1054 aa		4.56	□□□□□ -1.68
POLR2B-208	ENST00000478188	SORCS3	Q9UPU3	1222 aa		4.56	□□□□□ -1.68
POLR2B-208	ENST00000478188	ATP6V1D	Q9Y5K8	247 aa		4.56	□□□□□ -1.68
POLR2B-208	ENST00000478188	KRBA1	A5PL33	1030 aa		4.55	□□□□□ -1.68
POLR2B-208	ENST00000478188	TMEM221	A6NGB7	291 aa		4.55	□□□□□ -1.68
POLR2B-208	ENST00000478188	ZNF233	A6NK53	670 aa		4.55	□□□□□ -1.68
POLR2B-208	ENST00000478188		M0R296	226 aa		4.55	□□□□□ -1.68
POLR2B-208	ENST00000478188	CYB561D2	O14569	222 aa		4.55	□□□□□ -1.68
POLR2B-208	ENST00000478188	TACC1	O75410	805 aa		4.55	□□□□□ -1.68
POLR2B-208	ENST00000478188	NOL4	O94818	638 aa		4.55	□□□□□ -1.68
POLR2B-208	ENST00000478188	RHO	P08100	348 aa		4.55	□□□□□ -1.68
POLR2B-208	ENST00000478188	FAM163B	P0C2L3	166 aa		4.55	□□□□□ -1.68
POLR2B-208	ENST00000478188	VARS	P26640	1264 aa	Known RBP	4.55	□□□□□ -1.68
POLR2B-208	ENST00000478188	PNPLA4	P41247	253 aa		4.55	□□□□□ -1.68
POLR2B-208	ENST00000478188	ASPA	P45381	313 aa		4.55	□□□□□ -1.68
POLR2B-208	ENST00000478188	CYP2J2	P51589	502 aa		4.55	□□□□□ -1.68
POLR2B-208	ENST00000478188	CACNA2D1	P54289	1103 aa		4.55	□□□□□ -1.68
POLR2B-208	ENST00000478188	VCP	P55072	806 aa	Known RBP	4.55	□□□□□ -1.68
POLR2B-208	ENST00000478188	SH3BP2	P78314	561 aa		4.55	□□□□□ -1.68
POLR2B-208	ENST00000478188	PPP3CA	Q08209	521 aa		4.55	□□□□□ -1.68
POLR2B-208	ENST00000478188	ADCY1	Q08828	1119 aa		4.55	□□□□□ -1.68
POLR2B-208	ENST00000478188	MORC3	Q14149	939 aa		4.55	□□□□□ -1.68
POLR2B-208	ENST00000478188	INTS6L	Q5JSJ4	861 aa	Known RBP	4.55	□□□□□ -1.68
POLR2B-208	ENST00000478188	PPM1L	Q5SGD2	360 aa		4.55	□□□□□ -1.68
POLR2B-208	ENST00000478188	PARM1	Q6UWI2	310 aa		4.55	□□□□□ -1.68
POLR2B-208	ENST00000478188	EP400NL	Q6ZTU2	488 aa		4.55	□□□□□ -1.68
POLR2B-208	ENST00000478188	CCDC149	Q6ZUS6	474 aa		4.55	□□□□□ -1.68
POLR2B-208	ENST00000478188	PAQR9	Q6ZVX9	377 aa		4.55	□□□□□ -1.68
POLR2B-208	ENST00000478188	GAREM2	Q75VX8	874 aa		4.55	□□□□□ -1.68
POLR2B-208	ENST00000478188	SMYD4	Q8IYR2	804 aa	Predicted RBP	4.55	□□□□□ -1.68
POLR2B-208	ENST00000478188	PRSS33	Q8NF86	280 aa		4.55	□□□□□ -1.68
POLR2B-208	ENST00000478188	EPS8L1	Q8TE68	723 aa		4.55	□□□□□ -1.68
POLR2B-208	ENST00000478188	FGF13	Q92913	245 aa		4.55	□□□□□ -1.68
POLR2B-208	ENST00000478188	ZSWIM3	Q96MP5	696 aa		4.55	□□□□□ -1.68
POLR2B-208	ENST00000478188	ZNF560	Q96MR9	790 aa		4.55	□□□□□ -1.68
POLR2B-208	ENST00000478188	LRRC3B	Q96PB8	259 aa		4.55	□□□□□ -1.68
POLR2B-208	ENST00000478188	DUSP9	Q99956	384 aa	Known RBP	4.55	□□□□□ -1.68
POLR2B-208	ENST00000478188	MRPL45	Q9BRJ2	306 aa	Known RBP	4.55	□□□□□ -1.68
POLR2B-208	ENST00000478188	BCO2	Q9BYV7	579 aa		4.55	□□□□□ -1.68
POLR2B-208	ENST00000478188	KCNK12	Q9HB15	430 aa		4.55	□□□□□ -1.68
POLR2B-208	ENST00000478188	APOBEC3G	Q9HC16	384 aa	Known RBP	4.55	□□□□□ -1.68
POLR2B-208	ENST00000478188	EXOC1	Q9NV70	894 aa		4.55	□□□□□ -1.68
POLR2B-208	ENST00000478188	MAN1B1	Q9UKM7	699 aa		4.55	□□□□□ -1.68
POLR2B-208	ENST00000478188	CDH7	Q9ULB5	785 aa		4.55	□□□□□ -1.68
POLR2B-208	ENST00000478188	AGAP1	Q9UPQ3	857 aa		4.55	□□□□□ -1.68
POLR2B-208	ENST00000478188	TNRC6B	Q9UPQ9	1833 aa	Known RBP	4.55	□□□□□ -1.68
POLR2B-208	ENST00000478188	FAM181B	A6NEQ2	426 aa		4.55	□□□□□ -1.68
POLR2B-208	ENST00000478188	SOAT2	O75908	522 aa		4.55	□□□□□ -1.68
POLR2B-208	ENST00000478188	ALAD	P13716	330 aa		4.55	□□□□□ -1.68
POLR2B-208	ENST00000478188	FSHR	P23945	695 aa		4.55	□□□□□ -1.68
POLR2B-208	ENST00000478188	LMO2	P25791	158 aa		4.55	□□□□□ -1.68
POLR2B-208	ENST00000478188	PRCP	P42785	496 aa		4.55	□□□□□ -1.68
POLR2B-208	ENST00000478188	MATR3	P43243	847 aa	Known RBP eCLIP	4.55	□□□□□ -1.68
POLR2B-208	ENST00000478188	GPR15	P49685	360 aa		4.55	□□□□□ -1.68
POLR2B-208	ENST00000478188	TWF1	Q12792	350 aa		4.55	□□□□□ -1.68
POLR2B-208	ENST00000478188	FZD5	Q13467	585 aa		4.55	□□□□□ -1.68
POLR2B-208	ENST00000478188	SURF1	Q15526	300 aa		4.55	□□□□□ -1.68
POLR2B-208	ENST00000478188	EDRF1	Q3B7T1	1238 aa		4.55	□□□□□ -1.68
POLR2B-208	ENST00000478188	ZNF658	Q5TYW1	1059 aa	Predicted RBP	4.55	□□□□□ -1.68
POLR2B-208	ENST00000478188	TTI2	Q6NXR4	508 aa		4.55	□□□□□ -1.68
POLR2B-208	ENST00000478188	STXBP4	Q6ZWJ1	553 aa		4.55	□□□□□ -1.68
POLR2B-208	ENST00000478188	OTOP3	Q7RTS5	596 aa		4.55	□□□□□ -1.68
POLR2B-208	ENST00000478188	UBALD2	Q8IYN6	164 aa		4.55	□□□□□ -1.68
POLR2B-208	ENST00000478188	TMEM86A	Q8N2M4	240 aa		4.55	□□□□□ -1.68
POLR2B-208	ENST00000478188	WHAMM	Q8TF30	809 aa		4.55	□□□□□ -1.68
POLR2B-208	ENST00000478188	C2orf15	Q8WU43	125 aa	Known RBP	4.55	□□□□□ -1.68
POLR2B-208	ENST00000478188	ERCC4	Q92889	916 aa	Predicted RBP	4.55	□□□□□ -1.68
POLR2B-208	ENST00000478188	PSMG2	Q969U7	264 aa		4.55	□□□□□ -1.68
POLR2B-208	ENST00000478188	LPIN3	Q9BQK8	851 aa		4.55	□□□□□ -1.68
POLR2B-208	ENST00000478188	ACBD6	Q9BR61	282 aa		4.55	□□□□□ -1.68
POLR2B-208	ENST00000478188	ABCB6	Q9NP58	842 aa		4.55	□□□□□ -1.68
POLR2B-208	ENST00000478188	DPP7	Q9UHL4	492 aa		4.55	□□□□□ -1.68
POLR2B-208	ENST00000478188	DSE	Q9UL01	958 aa		4.55	□□□□□ -1.68
POLR2B-208	ENST00000478188	POLI	Q9UNA4	740 aa		4.55	□□□□□ -1.68
POLR2B-208	ENST00000478188	PCDHA5	Q9Y5H7	936 aa		4.55	□□□□□ -1.68
POLR2B-208	ENST00000478188	ZFP37	Q9Y6Q3	630 aa	Predicted RBP	4.55	□□□□□ -1.68
POLR2B-208	ENST00000478188	PLXND1	Q9Y4D7	1925 aa		4.55	□□□□□ -1.68
POLR2B-208	ENST00000478188	ECI2	O75521	394 aa		4.54	□□□□□ -1.68
POLR2B-208	ENST00000478188	ASS1	P00966	412 aa	Known RBP	4.54	□□□□□ -1.68
POLR2B-208	ENST00000478188	F11	P03951	625 aa		4.54	□□□□□ -1.68
POLR2B-208	ENST00000478188	SP100	P23497	879 aa	Predicted RBP	4.54	□□□□□ -1.68
POLR2B-208	ENST00000478188	CA8	P35219	290 aa		4.54	□□□□□ -1.68

Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms