RNA–Protein interactions for RNA: ENST00000478111.5

TRIM13-208, Transcript of tripartite motif containing 13, humanhuman

TSL 2

Gene TRIM13, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-208ENST00000478111 HUS1O60921 280 aa17.95■□□□□ 0.46
TRIM13-208ENST00000478111 NOL4O94818 638 aa17.95■□□□□ 0.46
TRIM13-208ENST00000478111 TXLNAP40222 546 aa17.95■□□□□ 0.46
TRIM13-208ENST00000478111 ALCAMQ13740 583 aa17.95■□□□□ 0.46
TRIM13-208ENST00000478111 TMEM196Q5HYL7 178 aa17.95■□□□□ 0.46
TRIM13-208ENST00000478111 LIMS2Q7Z4I7 341 aa17.95■□□□□ 0.46
TRIM13-208ENST00000478111 WDR5BQ86VZ2 330 aa17.95■□□□□ 0.46
TRIM13-208ENST00000478111 SYCP3Q8IZU3 236 aa17.95■□□□□ 0.46
TRIM13-208ENST00000478111 TMEM86AQ8N2M4 240 aa17.95■□□□□ 0.46
TRIM13-208ENST00000478111 GLIS3Q8NEA6 775 aa17.95■□□□□ 0.46
TRIM13-208ENST00000478111 TRMT2BQ96GJ1 504 aaKnown RBP17.95■□□□□ 0.46
TRIM13-208ENST00000478111 RTKNQ9BST9 563 aa17.95■□□□□ 0.46
TRIM13-208ENST00000478111 EBF3Q9H4W6 596 aa17.95■□□□□ 0.46
TRIM13-208ENST00000478111 FBRSL1Q9HCM7 1045 aaKnown RBP17.95■□□□□ 0.46
TRIM13-208ENST00000478111 ITGA11Q9UKX5 1188 aa17.95■□□□□ 0.46
TRIM13-208ENST00000478111 CDV3Q9UKY7 258 aaKnown RBP17.95■□□□□ 0.46
TRIM13-208ENST00000478111 MAGED2Q9UNF1 606 aaPredicted RBP17.95■□□□□ 0.46
TRIM13-208ENST00000478111 SNX9Q9Y5X1 595 aa17.95■□□□□ 0.46
TRIM13-208ENST00000478111 HELZP42694 1942 aaKnown RBP17.95■□□□□ 0.46
TRIM13-208ENST00000478111 PTPRJQ12913 1337 aa17.95■□□□□ 0.46
TRIM13-208ENST00000478111 DCDC2BA2VCK2 349 aa17.94■□□□□ 0.46
TRIM13-208ENST00000478111 ARSAP15289 507 aa17.94■□□□□ 0.46
TRIM13-208ENST00000478111 STAT6P42226 847 aa17.94■□□□□ 0.46
TRIM13-208ENST00000478111 RBP5P82980 135 aa17.94■□□□□ 0.46
TRIM13-208ENST00000478111 MYL7Q01449 175 aa17.94■□□□□ 0.46
TRIM13-208ENST00000478111 BFSP1Q12934 665 aa17.94■□□□□ 0.46
TRIM13-208ENST00000478111 ZNF268Q14587 947 aaPredicted RBP17.94■□□□□ 0.46
TRIM13-208ENST00000478111 SOWAHAQ2M3V2 549 aa17.94■□□□□ 0.46
TRIM13-208ENST00000478111 CFAP221Q4G0U5 840 aa17.94■□□□□ 0.46
TRIM13-208ENST00000478111 TOP6BLQ8N6T0 577 aa17.94■□□□□ 0.46
TRIM13-208ENST00000478111 SPATA18Q8TC71 538 aa17.94■□□□□ 0.46
TRIM13-208ENST00000478111 MRPS31Q92665 395 aaKnown RBP17.94■□□□□ 0.46
TRIM13-208ENST00000478111 SLC22A12Q96S37 553 aa17.94■□□□□ 0.46
TRIM13-208ENST00000478111 MTMR12Q9C0I1 747 aa17.94■□□□□ 0.46
TRIM13-208ENST00000478111 KIF9Q9HAQ2 790 aa17.94■□□□□ 0.46
TRIM13-208ENST00000478111 SEMA4GQ9NTN9 838 aa17.94■□□□□ 0.46
TRIM13-208ENST00000478111 TULP1O00294 542 aaPredicted RBP17.93■□□□□ 0.46
TRIM13-208ENST00000478111 HOXD13P35453 343 aa17.93■□□□□ 0.46
TRIM13-208ENST00000478111 RPL10AP62906 217 aaKnown RBP17.93■□□□□ 0.46
TRIM13-208ENST00000478111 CSRP2Q16527 193 aa17.93■□□□□ 0.46
TRIM13-208ENST00000478111 LMBRD2Q68DH5 695 aaPredicted RBP17.93■□□□□ 0.46
TRIM13-208ENST00000478111 NAIF1Q69YI7 327 aaPredicted RBP17.93■□□□□ 0.46
TRIM13-208ENST00000478111 FAM171BQ6P995 826 aa17.93■□□□□ 0.46
TRIM13-208ENST00000478111 GPD1LQ8N335 351 aa17.93■□□□□ 0.46
TRIM13-208ENST00000478111 FAM160A2Q8N612 972 aaPredicted RBP17.93■□□□□ 0.46
TRIM13-208ENST00000478111 PDILTQ8N807 584 aa17.93■□□□□ 0.46
TRIM13-208ENST00000478111 OR5B17Q8NGF7 314 aa17.93■□□□□ 0.46
TRIM13-208ENST00000478111 HPS3Q969F9 1004 aa17.93■□□□□ 0.46
TRIM13-208ENST00000478111 CYP2S1Q96SQ9 504 aa17.93■□□□□ 0.46
TRIM13-208ENST00000478111 TMEM206Q9H813 350 aa17.93■□□□□ 0.46
TRIM13-208ENST00000478111 INTS13Q9NVM9 706 aa17.93■□□□□ 0.46
TRIM13-208ENST00000478111 MAP1BP46821 2468 aaKnown RBP17.92■□□□□ 0.46
TRIM13-208ENST00000478111 ATP2C2O75185 946 aa17.92■□□□□ 0.46
TRIM13-208ENST00000478111 KRT19P08727 400 aa17.92■□□□□ 0.46
TRIM13-208ENST00000478111 LHX1P48742 406 aa17.92■□□□□ 0.46
TRIM13-208ENST00000478111 NASPP49321 788 aaPredicted RBP17.92■□□□□ 0.46
TRIM13-208ENST00000478111 GALK1P51570 392 aa17.92■□□□□ 0.46
TRIM13-208ENST00000478111 E2F4Q16254 413 aa17.92■□□□□ 0.46
TRIM13-208ENST00000478111 PRR23CQ6ZRP0 262 aa17.92■□□□□ 0.46
TRIM13-208ENST00000478111 ADGRF2Q8IZF7 708 aa17.92■□□□□ 0.46
TRIM13-208ENST00000478111 KBTBD7Q8WVZ9 684 aa17.92■□□□□ 0.46
TRIM13-208ENST00000478111 INTS4Q96HW7 963 aaKnown RBP17.92■□□□□ 0.46
TRIM13-208ENST00000478111 FUBP3Q96I24 572 aaKnown RBP eCLIP17.92■□□□□ 0.46
TRIM13-208ENST00000478111 POLR3BQ9NW08 1133 aaPredicted RBP17.92■□□□□ 0.46
TRIM13-208ENST00000478111 GCNT4Q9P109 453 aa17.92■□□□□ 0.46
TRIM13-208ENST00000478111 UXTQ9UBK9 157 aaPredicted RBP17.92■□□□□ 0.46
TRIM13-208ENST00000478111 SLC30A4O14863 429 aa17.91■□□□□ 0.46
TRIM13-208ENST00000478111 GDF9O60383 454 aa17.91■□□□□ 0.46
TRIM13-208ENST00000478111 EGFP01133 1207 aa17.91■□□□□ 0.46
TRIM13-208ENST00000478111 TMEM191BP0C7N4 346 aa17.91■□□□□ 0.46
TRIM13-208ENST00000478111 LMO2P25791 158 aa17.91■□□□□ 0.46
TRIM13-208ENST00000478111 GJA4P35212 333 aa17.91■□□□□ 0.46
TRIM13-208ENST00000478111 PXNP49023 591 aaPredicted RBP17.91■□□□□ 0.46
TRIM13-208ENST00000478111 FAM160A1Q05DH4 1040 aa17.91■□□□□ 0.46
TRIM13-208ENST00000478111 GRSF1Q12849 480 aaKnown RBP eCLIP17.91■□□□□ 0.46
TRIM13-208ENST00000478111 MTF1Q14872 753 aa17.91■□□□□ 0.46
TRIM13-208ENST00000478111 ZNF77Q15935 545 aa17.91■□□□□ 0.46
TRIM13-208ENST00000478111 DPH6Q7L8W6 267 aa17.91■□□□□ 0.46
TRIM13-208ENST00000478111 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.91■□□□□ 0.46
TRIM13-208ENST00000478111 CBWD2Q8IUF1 395 aa17.91■□□□□ 0.46
TRIM13-208ENST00000478111 NETO1Q8TDF5 533 aa17.91■□□□□ 0.46
TRIM13-208ENST00000478111 NOC3LQ8WTT2 800 aaKnown RBP17.91■□□□□ 0.46
TRIM13-208ENST00000478111 EZH1Q92800 747 aaPredicted RBP17.91■□□□□ 0.46
TRIM13-208ENST00000478111 KBTBD4Q9NVX7 518 aa17.91■□□□□ 0.46
TRIM13-208ENST00000478111 CCDC163A0A0D9SF12 145 aa17.9■□□□□ 0.46
TRIM13-208ENST00000478111 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17.9■□□□□ 0.46
TRIM13-208ENST00000478111 KIAA0391O15091 583 aaKnown RBP17.9■□□□□ 0.46
TRIM13-208ENST00000478111 RNF40O75150 1001 aa17.9■□□□□ 0.46
TRIM13-208ENST00000478111 PCSK1P29120 753 aa17.9■□□□□ 0.46
TRIM13-208ENST00000478111 MAGEA11P43364 429 aa17.9■□□□□ 0.46
TRIM13-208ENST00000478111 PDGFRLQ15198 375 aa17.9■□□□□ 0.46
TRIM13-208ENST00000478111 CC2D1AQ6P1N0 951 aaPredicted RBP17.9■□□□□ 0.46
TRIM13-208ENST00000478111 CEP68Q76N32 757 aa17.9■□□□□ 0.46
TRIM13-208ENST00000478111 EPM2AIP1Q7L775 607 aaPredicted RBP17.9■□□□□ 0.46
TRIM13-208ENST00000478111 SPATA2LQ8IUW3 424 aaPredicted RBP17.9■□□□□ 0.46
TRIM13-208ENST00000478111 CCDC65Q8IXS2 484 aa17.9■□□□□ 0.46
TRIM13-208ENST00000478111 LINC00301Q8NCQ3 95 aa17.9■□□□□ 0.46
TRIM13-208ENST00000478111 HPDLQ96IR7 371 aa17.9■□□□□ 0.46
TRIM13-208ENST00000478111 ANKRD36BP1Q96IX9 119 aa17.9■□□□□ 0.46
TRIM13-208ENST00000478111 TNMDQ9H2S6 317 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms