RNA–Protein interactions for RNA: ENST00000477556.1

PABPC4-212, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 3

Gene PABPC4, Length 413 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-212ENST00000477556 GTF3C4Q9UKN8 822 aa14.09□□□□□ -0.15
PABPC4-212ENST00000477556 MORC2Q9Y6X9 1032 aaPredicted RBP14.09□□□□□ -0.15
PABPC4-212ENST00000477556 SPTBN2O15020 2390 aa14.08□□□□□ -0.16
PABPC4-212ENST00000477556 LOC105378220A0A1B0GUY1 285 aaPredicted RBP14.08□□□□□ -0.16
PABPC4-212ENST00000477556 TRDMT1O14717 391 aaKnown RBP14.08□□□□□ -0.16
PABPC4-212ENST00000477556 SLC30A4O14863 429 aa14.08□□□□□ -0.16
PABPC4-212ENST00000477556 PRPF6O94906 941 aaKnown RBP14.08□□□□□ -0.16
PABPC4-212ENST00000477556 FAM160A1Q05DH4 1040 aa14.08□□□□□ -0.16
PABPC4-212ENST00000477556 MYO1EQ12965 1108 aa14.08□□□□□ -0.16
PABPC4-212ENST00000477556 SLC39A14Q15043 492 aa14.08□□□□□ -0.16
PABPC4-212ENST00000477556 SURF1Q15526 300 aa14.08□□□□□ -0.16
PABPC4-212ENST00000477556 FSTL4Q6MZW2 842 aa14.08□□□□□ -0.16
PABPC4-212ENST00000477556 PRR23CQ6ZRP0 262 aa14.08□□□□□ -0.16
PABPC4-212ENST00000477556 OSTM1Q86WC4 334 aa14.08□□□□□ -0.16
PABPC4-212ENST00000477556 FAM160A2Q8N612 972 aaPredicted RBP14.08□□□□□ -0.16
PABPC4-212ENST00000477556 STKLD1Q8NE28 680 aa14.08□□□□□ -0.16
PABPC4-212ENST00000477556 FUBP3Q96I24 572 aaKnown RBP eCLIP14.08□□□□□ -0.16
PABPC4-212ENST00000477556 USP28Q96RU2 1077 aa14.08□□□□□ -0.16
PABPC4-212ENST00000477556 MTMR12Q9C0I1 747 aa14.08□□□□□ -0.16
PABPC4-212ENST00000477556 PDE11AQ9HCR9 933 aa14.08□□□□□ -0.16
PABPC4-212ENST00000477556 TRPC7Q9HCX4 862 aa14.08□□□□□ -0.16
PABPC4-212ENST00000477556 SLC8A2Q9UPR5 921 aa14.08□□□□□ -0.16
PABPC4-212ENST00000477556 TRAV19A0A0A6YYK7 116 aa14.07□□□□□ -0.16
PABPC4-212ENST00000477556 CCDC163A0A0D9SF12 145 aa14.07□□□□□ -0.16
PABPC4-212ENST00000477556 ZNF233A6NK53 670 aa14.07□□□□□ -0.16
PABPC4-212ENST00000477556 TNNC2P02585 160 aa14.07□□□□□ -0.16
PABPC4-212ENST00000477556 CKMP06732 381 aa14.07□□□□□ -0.16
PABPC4-212ENST00000477556 USP17L7P0C7H9 530 aa14.07□□□□□ -0.16
PABPC4-212ENST00000477556 ARSAP15289 507 aa14.07□□□□□ -0.16
PABPC4-212ENST00000477556 DRD1P21728 446 aa14.07□□□□□ -0.16
PABPC4-212ENST00000477556 IFNAR2P48551 515 aa14.07□□□□□ -0.16
PABPC4-212ENST00000477556 MTF1Q14872 753 aa14.07□□□□□ -0.16
PABPC4-212ENST00000477556 CFAP221Q4G0U5 840 aa14.07□□□□□ -0.16
PABPC4-212ENST00000477556 PKN3Q6P5Z2 889 aa14.07□□□□□ -0.16
PABPC4-212ENST00000477556 C4orf50Q6ZRC1 276 aa14.07□□□□□ -0.16
PABPC4-212ENST00000477556 DPH6Q7L8W6 267 aa14.07□□□□□ -0.16
PABPC4-212ENST00000477556 SCN4BQ8IWT1 228 aa14.07□□□□□ -0.16
PABPC4-212ENST00000477556 CPA6Q8N4T0 437 aa14.07□□□□□ -0.16
PABPC4-212ENST00000477556 PDILTQ8N807 584 aa14.07□□□□□ -0.16
PABPC4-212ENST00000477556 FSIP1Q8NA03 581 aa14.07□□□□□ -0.16
PABPC4-212ENST00000477556 CXorf38Q8TB03 319 aa14.07□□□□□ -0.16
PABPC4-212ENST00000477556 GAB3Q8WWW8 586 aa14.07□□□□□ -0.16
PABPC4-212ENST00000477556 MYRFLQ96LU7 910 aa14.07□□□□□ -0.16
PABPC4-212ENST00000477556 PKMYT1Q99640 499 aa14.07□□□□□ -0.16
PABPC4-212ENST00000477556 FGFBP2Q9BYJ0 223 aa14.07□□□□□ -0.16
PABPC4-212ENST00000477556 LRRC27Q9C0I9 530 aa14.07□□□□□ -0.16
PABPC4-212ENST00000477556 ZSCAN16Q9H4T2 348 aaPredicted RBP14.07□□□□□ -0.16
PABPC4-212ENST00000477556 INTS13Q9NVM9 706 aa14.07□□□□□ -0.16
PABPC4-212ENST00000477556 SIX4Q9UIU6 781 aa14.07□□□□□ -0.16
PABPC4-212ENST00000477556 KIF26AQ9ULI4 1882 aaPredicted RBP14.07□□□□□ -0.16
PABPC4-212ENST00000477556 ZNF638Q14966 1978 aaKnown RBP14.07□□□□□ -0.16
PABPC4-212ENST00000477556 DMXL1Q9Y485 3027 aa14.07□□□□□ -0.16
PABPC4-212ENST00000477556 DENND4CQ5VZ89 1909 aa14.06□□□□□ -0.16
PABPC4-212ENST00000477556 A0A087X0B3 334 aa14.06□□□□□ -0.16
PABPC4-212ENST00000477556 OTOL1A6NHN0 477 aaPredicted RBP14.06□□□□□ -0.16
PABPC4-212ENST00000477556 GABRDO14764 452 aa14.06□□□□□ -0.16
PABPC4-212ENST00000477556 RNF40O75150 1001 aa14.06□□□□□ -0.16
PABPC4-212ENST00000477556 TADA3O75528 432 aa14.06□□□□□ -0.16
PABPC4-212ENST00000477556 RPP40O75818 363 aaKnown RBP14.06□□□□□ -0.16
PABPC4-212ENST00000477556 EGFP01133 1207 aa14.06□□□□□ -0.16
PABPC4-212ENST00000477556 CCDC192P0DO97 292 aa14.06□□□□□ -0.16
PABPC4-212ENST00000477556 MAGEA11P43364 429 aa14.06□□□□□ -0.16
PABPC4-212ENST00000477556 STK38Q15208 465 aa14.06□□□□□ -0.16
PABPC4-212ENST00000477556 DUOXA2Q1HG44 320 aa14.06□□□□□ -0.16
PABPC4-212ENST00000477556 SOWAHAQ2M3V2 549 aa14.06□□□□□ -0.16
PABPC4-212ENST00000477556 FBXO43Q4G163 708 aa14.06□□□□□ -0.16
PABPC4-212ENST00000477556 LMBRD2Q68DH5 695 aaPredicted RBP14.06□□□□□ -0.16
PABPC4-212ENST00000477556 CACNA2D4Q7Z3S7 1137 aa14.06□□□□□ -0.16
PABPC4-212ENST00000477556 CAMKK1Q8N5S9 505 aa14.06□□□□□ -0.16
PABPC4-212ENST00000477556 TTC16Q8NEE8 873 aa14.06□□□□□ -0.16
PABPC4-212ENST00000477556 RIN3Q8TB24 985 aa14.06□□□□□ -0.16
PABPC4-212ENST00000477556 OSCP1Q8WVF1 389 aa14.06□□□□□ -0.16
PABPC4-212ENST00000477556 INTS4Q96HW7 963 aaKnown RBP14.06□□□□□ -0.16
PABPC4-212ENST00000477556 HPDLQ96IR7 371 aa14.06□□□□□ -0.16
PABPC4-212ENST00000477556 LOXL4Q96JB6 756 aa14.06□□□□□ -0.16
PABPC4-212ENST00000477556 FAM84AQ96KN4 292 aa14.06□□□□□ -0.16
PABPC4-212ENST00000477556 P2RY13Q9BPV8 354 aa14.06□□□□□ -0.16
PABPC4-212ENST00000477556 SYT15Q9BQS2 421 aa14.06□□□□□ -0.16
PABPC4-212ENST00000477556 TNMDQ9H2S6 317 aa14.06□□□□□ -0.16
PABPC4-212ENST00000477556 ECT2Q9H8V3 914 aa14.06□□□□□ -0.16
PABPC4-212ENST00000477556 DUS2Q9NX74 493 aaKnown RBP14.06□□□□□ -0.16
PABPC4-212ENST00000477556 MAGEC2Q9UBF1 373 aaPredicted RBP14.06□□□□□ -0.16
PABPC4-212ENST00000477556 CDH9Q9ULB4 789 aa14.06□□□□□ -0.16
PABPC4-212ENST00000477556 AXIN1O15169 862 aa14.05□□□□□ -0.16
PABPC4-212ENST00000477556 HOXC13P31276 330 aa14.05□□□□□ -0.16
PABPC4-212ENST00000477556 GJA4P35212 333 aa14.05□□□□□ -0.16
PABPC4-212ENST00000477556 PXNP49023 591 aaPredicted RBP14.05□□□□□ -0.16
PABPC4-212ENST00000477556 PDE6CP51160 858 aa14.05□□□□□ -0.16
PABPC4-212ENST00000477556 GALK1P51570 392 aa14.05□□□□□ -0.16
PABPC4-212ENST00000477556 USP4Q13107 963 aa14.05□□□□□ -0.16
PABPC4-212ENST00000477556 NR1H3Q13133 447 aa14.05□□□□□ -0.16
PABPC4-212ENST00000477556 KCNB1Q14721 858 aa14.05□□□□□ -0.16
PABPC4-212ENST00000477556 MAPRE1Q15691 268 aaKnown RBP14.05□□□□□ -0.16
PABPC4-212ENST00000477556 ZNF77Q15935 545 aa14.05□□□□□ -0.16
PABPC4-212ENST00000477556 CCDC142Q17RM4 750 aa14.05□□□□□ -0.16
PABPC4-212ENST00000477556 SCARA3Q6AZY7 606 aa14.05□□□□□ -0.16
PABPC4-212ENST00000477556 FAM171BQ6P995 826 aa14.05□□□□□ -0.16
PABPC4-212ENST00000477556 VSTM1Q6UX27 236 aa14.05□□□□□ -0.16
PABPC4-212ENST00000477556 CD101Q93033 1021 aa14.05□□□□□ -0.16
PABPC4-212ENST00000477556 ATP2A3Q93084 1043 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms