RNA–Protein interactions for RNA: ENST00000477508.1

TOP3A-205, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 600 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-205ENST00000477508 LRMPQ12912 555 aa13.97□□□□□ -0.17
TOP3A-205ENST00000477508 IQCB1Q15051 598 aa13.97□□□□□ -0.17
TOP3A-205ENST00000477508 MDH1BQ5I0G3 518 aa13.97□□□□□ -0.17
TOP3A-205ENST00000477508 TRIM65Q6PJ69 517 aa13.97□□□□□ -0.17
TOP3A-205ENST00000477508 MYLPFQ96A32 169 aa13.97□□□□□ -0.17
TOP3A-205ENST00000477508 PCED1BQ96HM7 432 aa13.97□□□□□ -0.17
TOP3A-205ENST00000477508 SEPT5Q99719 369 aaPredicted RBP13.97□□□□□ -0.17
TOP3A-205ENST00000477508 CRACR2AQ9BSW2 395 aa13.97□□□□□ -0.17
TOP3A-205ENST00000477508 PHF7Q9BWX1 381 aaPredicted RBP13.97□□□□□ -0.17
TOP3A-205ENST00000477508 VPS16Q9H269 839 aa13.97□□□□□ -0.17
TOP3A-205ENST00000477508 WDR6Q9NNW5 1121 aaKnown RBP13.97□□□□□ -0.17
TOP3A-205ENST00000477508 AVENQ9NQS1 362 aaPredicted RBP13.97□□□□□ -0.17
TOP3A-205ENST00000477508 TMLHEQ9NVH6 421 aa13.97□□□□□ -0.17
TOP3A-205ENST00000477508 TAB2Q9NYJ8 693 aa13.97□□□□□ -0.17
TOP3A-205ENST00000477508 APEX2Q9UBZ4 518 aa13.97□□□□□ -0.17
TOP3A-205ENST00000477508 KIAA1257Q9ULG3 409 aa13.97□□□□□ -0.17
TOP3A-205ENST00000477508 SLC27A5Q9Y2P5 690 aa13.97□□□□□ -0.17
TOP3A-205ENST00000477508 NME7Q9Y5B8 376 aa13.97□□□□□ -0.17
TOP3A-205ENST00000477508 ZNF197O14709 1029 aa13.96□□□□□ -0.17
TOP3A-205ENST00000477508 HCRTO43612 131 aa13.96□□□□□ -0.17
TOP3A-205ENST00000477508 FGF19O95750 216 aa13.96□□□□□ -0.17
TOP3A-205ENST00000477508 RFX1P22670 979 aa13.96□□□□□ -0.17
TOP3A-205ENST00000477508 PON1P27169 355 aa13.96□□□□□ -0.17
TOP3A-205ENST00000477508 KCNQ1P51787 676 aa13.96□□□□□ -0.17
TOP3A-205ENST00000477508 NUBP1P53384 320 aa13.96□□□□□ -0.17
TOP3A-205ENST00000477508 COPB1P53618 953 aaKnown RBP13.96□□□□□ -0.17
TOP3A-205ENST00000477508 MFAP3P55082 362 aa13.96□□□□□ -0.17
TOP3A-205ENST00000477508 FILIP1LQ4L180 1135 aa13.96□□□□□ -0.17
TOP3A-205ENST00000477508 CYP4A22Q5TCH4 519 aa13.96□□□□□ -0.17
TOP3A-205ENST00000477508 LRSAM1Q6UWE0 723 aa13.96□□□□□ -0.17
TOP3A-205ENST00000477508 ACOT1Q86TX2 421 aa13.96□□□□□ -0.17
TOP3A-205ENST00000477508 FAM200AQ8TCP9 573 aa13.96□□□□□ -0.17
TOP3A-205ENST00000477508 TMEM176AQ96HP8 235 aa13.96□□□□□ -0.17
TOP3A-205ENST00000477508 HSD3B7Q9H2F3 369 aa13.96□□□□□ -0.17
TOP3A-205ENST00000477508 CRISPLD1Q9H336 500 aa13.96□□□□□ -0.17
TOP3A-205ENST00000477508 DPEP3Q9H4B8 488 aa13.96□□□□□ -0.17
TOP3A-205ENST00000477508 CBX8Q9HC52 389 aa13.96□□□□□ -0.17
TOP3A-205ENST00000477508 UBE2TQ9NPD8 197 aaPredicted RBP13.96□□□□□ -0.17
TOP3A-205ENST00000477508 EHD2Q9NZN4 543 aa13.96□□□□□ -0.17
TOP3A-205ENST00000477508 USTQ9Y2C2 406 aa13.96□□□□□ -0.17
TOP3A-205ENST00000477508 NR2E1Q9Y466 385 aa13.96□□□□□ -0.17
TOP3A-205ENST00000477508 UNC80Q8N2C7 3258 aa13.96□□□□□ -0.18
TOP3A-205ENST00000477508 CLUHO75153 1309 aa13.95□□□□□ -0.18
TOP3A-205ENST00000477508 A0A0C4DFX4 3053 aa13.95□□□□□ -0.18
TOP3A-205ENST00000477508 LGALS16A8MUM7 142 aa13.95□□□□□ -0.18
TOP3A-205ENST00000477508 TRIM66O15016 1216 aa13.95□□□□□ -0.18
TOP3A-205ENST00000477508 SLC9A1P19634 815 aa13.95□□□□□ -0.18
TOP3A-205ENST00000477508 CYP2F1P24903 491 aa13.95□□□□□ -0.18
TOP3A-205ENST00000477508 ANXA13P27216 316 aa13.95□□□□□ -0.18
TOP3A-205ENST00000477508 TAF12Q16514 161 aa13.95□□□□□ -0.18
TOP3A-205ENST00000477508 PABPC1LQ4VXU2 614 aaKnown RBP13.95□□□□□ -0.18
TOP3A-205ENST00000477508 PHLDB3Q6NSJ2 640 aa13.95□□□□□ -0.18
TOP3A-205ENST00000477508 OTOP3Q7RTS5 596 aa13.95□□□□□ -0.18
TOP3A-205ENST00000477508 GRASPQ7Z6J2 395 aaPredicted RBP13.95□□□□□ -0.18
TOP3A-205ENST00000477508 ADHFE1Q8IWW8 467 aa13.95□□□□□ -0.18
TOP3A-205ENST00000477508 TTC9BQ8N6N2 239 aa13.95□□□□□ -0.18
TOP3A-205ENST00000477508 WHAMMQ8TF30 809 aa13.95□□□□□ -0.18
TOP3A-205ENST00000477508 PSMG2Q969U7 264 aa13.95□□□□□ -0.18
TOP3A-205ENST00000477508 ACSF2Q96CM8 615 aaPredicted RBP13.95□□□□□ -0.18
TOP3A-205ENST00000477508 SMARCD1Q96GM5 515 aa13.95□□□□□ -0.18
TOP3A-205ENST00000477508 SPATA17Q96L03 361 aa13.95□□□□□ -0.18
TOP3A-205ENST00000477508 C8orf48Q96LL4 319 aa13.95□□□□□ -0.18
TOP3A-205ENST00000477508 HEXIM2Q96MH2 286 aaKnown RBP13.95□□□□□ -0.18
TOP3A-205ENST00000477508 ARID3AQ99856 593 aa13.95□□□□□ -0.18
TOP3A-205ENST00000477508 MED10Q9BTT4 135 aa13.95□□□□□ -0.18
TOP3A-205ENST00000477508 B3GNT5Q9BYG0 378 aa13.95□□□□□ -0.18
TOP3A-205ENST00000477508 TSPY26PQ9H489 355 aa13.95□□□□□ -0.18
TOP3A-205ENST00000477508 POMKQ9H5K3 350 aa13.95□□□□□ -0.18
TOP3A-205ENST00000477508 ASAH2Q9NR71 780 aa13.95□□□□□ -0.18
TOP3A-205ENST00000477508 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.95□□□□□ -0.18
TOP3A-205ENST00000477508 DAAM1Q9Y4D1 1078 aa13.95□□□□□ -0.18
TOP3A-205ENST00000477508 ZFP37Q9Y6Q3 630 aaPredicted RBP13.95□□□□□ -0.18
TOP3A-205ENST00000477508 MICAL2O94851 1124 aa13.94□□□□□ -0.18
TOP3A-205ENST00000477508 PAEPP09466 180 aa13.94□□□□□ -0.18
TOP3A-205ENST00000477508 CSH1P0DML2 217 aa13.94□□□□□ -0.18
TOP3A-205ENST00000477508 CSH2P0DML3 217 aa13.94□□□□□ -0.18
TOP3A-205ENST00000477508 IL9P15248 144 aa13.94□□□□□ -0.18
TOP3A-205ENST00000477508 BDNFP23560 247 aa13.94□□□□□ -0.18
TOP3A-205ENST00000477508 FSHRP23945 695 aa13.94□□□□□ -0.18
TOP3A-205ENST00000477508 GRIK1P39086 918 aa13.94□□□□□ -0.18
TOP3A-205ENST00000477508 RAD23BP54727 409 aa13.94□□□□□ -0.18
TOP3A-205ENST00000477508 EPHA5P54756 1037 aa13.94□□□□□ -0.18
TOP3A-205ENST00000477508 ZNF445P59923 1031 aa13.94□□□□□ -0.18
TOP3A-205ENST00000477508 PDZD4Q76G19 769 aaPredicted RBP13.94□□□□□ -0.18
TOP3A-205ENST00000477508 RRAGAQ7L523 313 aa13.94□□□□□ -0.18
TOP3A-205ENST00000477508 DNAJB7Q7Z6W7 309 aaPredicted RBP13.94□□□□□ -0.18
TOP3A-205ENST00000477508 ARHGEF19Q8IW93 802 aa13.94□□□□□ -0.18
TOP3A-205ENST00000477508 SCN4BQ8IWT1 228 aa13.94□□□□□ -0.18
TOP3A-205ENST00000477508 FUKQ8N0W3 1084 aa13.94□□□□□ -0.18
TOP3A-205ENST00000477508 UBR7Q8N806 425 aa13.94□□□□□ -0.18
TOP3A-205ENST00000477508 CYFIP2Q96F07 1278 aa13.94□□□□□ -0.18
TOP3A-205ENST00000477508 TWNKQ96RR1 684 aa13.94□□□□□ -0.18
TOP3A-205ENST00000477508 HNRNPABQ99729 332 aaKnown RBP13.94□□□□□ -0.18
TOP3A-205ENST00000477508 CORO1BQ9BR76 489 aa13.94□□□□□ -0.18
TOP3A-205ENST00000477508 PLCB1Q9NQ66 1216 aa13.94□□□□□ -0.18
TOP3A-205ENST00000477508 CEP72Q9P209 647 aa13.94□□□□□ -0.18
TOP3A-205ENST00000477508 DNMT3BQ9UBC3 853 aaKnown RBP13.94□□□□□ -0.18
TOP3A-205ENST00000477508 UXTQ9UBK9 157 aaPredicted RBP13.94□□□□□ -0.18
TOP3A-205ENST00000477508 HMGXB4Q9UGU5 601 aa13.94□□□□□ -0.18
TOP3A-205ENST00000477508 CNTN6Q9UQ52 1028 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms