RNA–Protein interactions for RNA: ENST00000477132.1

PRKD3-209, Transcript of protein kinase D3, humanhuman

TSL 4

Gene PRKD3, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-209ENST00000477132 PIK3CAP42336 1068 aa13.11□□□□□ -0.31
PRKD3-209ENST00000477132 ASPAP45381 313 aa13.11□□□□□ -0.31
PRKD3-209ENST00000477132 VCPP55072 806 aaKnown RBP13.11□□□□□ -0.31
PRKD3-209ENST00000477132 CYP4F8P98187 520 aa13.11□□□□□ -0.31
PRKD3-209ENST00000477132 ENPEPQ07075 957 aa13.11□□□□□ -0.31
PRKD3-209ENST00000477132 CAMK4Q16566 473 aa13.11□□□□□ -0.31
PRKD3-209ENST00000477132 DDR2Q16832 855 aa13.11□□□□□ -0.31
PRKD3-209ENST00000477132 CFAP221Q4G0U5 840 aa13.11□□□□□ -0.31
PRKD3-209ENST00000477132 ZNF667Q5HYK9 610 aa13.11□□□□□ -0.31
PRKD3-209ENST00000477132 MDH1BQ5I0G3 518 aa13.11□□□□□ -0.31
PRKD3-209ENST00000477132 CWF19L1Q69YN2 538 aaKnown RBP13.11□□□□□ -0.31
PRKD3-209ENST00000477132 TANGO2Q6ICL3 276 aa13.11□□□□□ -0.31
PRKD3-209ENST00000477132 MTSS1LQ765P7 747 aa13.11□□□□□ -0.31
PRKD3-209ENST00000477132 TMEM150AQ86TG1 271 aa13.11□□□□□ -0.31
PRKD3-209ENST00000477132 SPATA2LQ8IUW3 424 aaPredicted RBP13.11□□□□□ -0.31
PRKD3-209ENST00000477132 RSPRY1Q96DX4 576 aa13.11□□□□□ -0.31
PRKD3-209ENST00000477132 PCED1BQ96HM7 432 aa13.11□□□□□ -0.31
PRKD3-209ENST00000477132 ASB16Q96NS5 453 aa13.11□□□□□ -0.31
PRKD3-209ENST00000477132 DUSP9Q99956 384 aaKnown RBP13.11□□□□□ -0.31
PRKD3-209ENST00000477132 SNX25Q9H3E2 840 aa13.11□□□□□ -0.31
PRKD3-209ENST00000477132 APOBEC3GQ9HC16 384 aaKnown RBP13.11□□□□□ -0.31
PRKD3-209ENST00000477132 ABCB6Q9NP58 842 aa13.11□□□□□ -0.31
PRKD3-209ENST00000477132 TMEM30AQ9NV96 361 aa13.11□□□□□ -0.31
PRKD3-209ENST00000477132 HMGXB4Q9UGU5 601 aa13.11□□□□□ -0.31
PRKD3-209ENST00000477132 ASB3Q9Y575 518 aa13.11□□□□□ -0.31
PRKD3-209ENST00000477132 HELZP42694 1942 aaKnown RBP13.1□□□□□ -0.31
PRKD3-209ENST00000477132 KRBA1A5PL33 1030 aa13.1□□□□□ -0.31
PRKD3-209ENST00000477132 TADA3O75528 432 aa13.1□□□□□ -0.31
PRKD3-209ENST00000477132 CLSTN1O94985 981 aa13.1□□□□□ -0.31
PRKD3-209ENST00000477132 EPB41P11171 864 aaKnown RBP13.1□□□□□ -0.31
PRKD3-209ENST00000477132 NPR3P17342 541 aa13.1□□□□□ -0.31
PRKD3-209ENST00000477132 CACNA2D1P54289 1103 aa13.1□□□□□ -0.31
PRKD3-209ENST00000477132 GPC5P78333 572 aa13.1□□□□□ -0.31
PRKD3-209ENST00000477132 FKBP3Q00688 224 aaKnown RBP13.1□□□□□ -0.31
PRKD3-209ENST00000477132 LRRC63Q05C16 580 aa13.1□□□□□ -0.31
PRKD3-209ENST00000477132 VEPH1Q14D04 833 aa13.1□□□□□ -0.31
PRKD3-209ENST00000477132 SGSM1Q2NKQ1 1148 aa13.1□□□□□ -0.31
PRKD3-209ENST00000477132 KLHL10Q6JEL2 608 aa13.1□□□□□ -0.31
PRKD3-209ENST00000477132 TTI2Q6NXR4 508 aa13.1□□□□□ -0.31
PRKD3-209ENST00000477132 CLEC17AQ6ZS10 378 aa13.1□□□□□ -0.31
PRKD3-209ENST00000477132 ITIH5Q86UX2 942 aa13.1□□□□□ -0.31
PRKD3-209ENST00000477132 FBXL6Q8N531 539 aa13.1□□□□□ -0.31
PRKD3-209ENST00000477132 ZSCAN18Q8TBC5 510 aaPredicted RBP13.1□□□□□ -0.31
PRKD3-209ENST00000477132 MYCBPAPQ8TBZ2 947 aa13.1□□□□□ -0.31
PRKD3-209ENST00000477132 SEMA4DQ92854 862 aa13.1□□□□□ -0.31
PRKD3-209ENST00000477132 FUBP3Q96I24 572 aaKnown RBP eCLIP13.1□□□□□ -0.31
PRKD3-209ENST00000477132 TSG101Q99816 390 aa13.1□□□□□ -0.31
PRKD3-209ENST00000477132 TMEM8AQ9HCN3 771 aa13.1□□□□□ -0.31
PRKD3-209ENST00000477132 SLC2A4RGQ9NR83 387 aa13.1□□□□□ -0.31
PRKD3-209ENST00000477132 CTNND2Q9UQB3 1225 aa13.1□□□□□ -0.31
PRKD3-209ENST00000477132 MYH10P35580 1976 aa13.1□□□□□ -0.31
PRKD3-209ENST00000477132 SLC38A8A6NNN8 435 aa13.09□□□□□ -0.31
PRKD3-209ENST00000477132 A8MXQ7 604 aa13.09□□□□□ -0.31
PRKD3-209ENST00000477132 CLDN5O00501 218 aa13.09□□□□□ -0.31
PRKD3-209ENST00000477132 PSMA7O14818 248 aa13.09□□□□□ -0.31
PRKD3-209ENST00000477132 SLC16A3O15427 465 aaKnown RBP13.09□□□□□ -0.31
PRKD3-209ENST00000477132 ECI2O75521 394 aa13.09□□□□□ -0.31
PRKD3-209ENST00000477132 NOL4O94818 638 aa13.09□□□□□ -0.31
PRKD3-209ENST00000477132 FAM163BP0C2L3 166 aa13.09□□□□□ -0.31
PRKD3-209ENST00000477132 PTPN1P18031 435 aaKnown RBP13.09□□□□□ -0.31
PRKD3-209ENST00000477132 BDNFP23560 247 aa13.09□□□□□ -0.31
PRKD3-209ENST00000477132 VIPR2P41587 438 aa13.09□□□□□ -0.31
PRKD3-209ENST00000477132 NOP14P78316 857 aaKnown RBP13.09□□□□□ -0.31
PRKD3-209ENST00000477132 CYP27A1Q02318 531 aa13.09□□□□□ -0.31
PRKD3-209ENST00000477132 ORC1Q13415 861 aa13.09□□□□□ -0.31
PRKD3-209ENST00000477132 GRM2Q14416 872 aa13.09□□□□□ -0.31
PRKD3-209ENST00000477132 CBWD6Q4V339 395 aa13.09□□□□□ -0.31
PRKD3-209ENST00000477132 DCAF17Q5H9S7 520 aaPredicted RBP13.09□□□□□ -0.31
PRKD3-209ENST00000477132 CBWD3Q5JTY5 395 aa13.09□□□□□ -0.31
PRKD3-209ENST00000477132 CBWD5Q5RIA9 395 aa13.09□□□□□ -0.31
PRKD3-209ENST00000477132 VITQ6UXI7 678 aa13.09□□□□□ -0.31
PRKD3-209ENST00000477132 GPIHBP1Q8IV16 184 aa13.09□□□□□ -0.31
PRKD3-209ENST00000477132 SCN4BQ8IWT1 228 aa13.09□□□□□ -0.31
PRKD3-209ENST00000477132 SIX5Q8N196 739 aa13.09□□□□□ -0.31
PRKD3-209ENST00000477132 B3GALNT2Q8NCR0 500 aa13.09□□□□□ -0.31
PRKD3-209ENST00000477132 NELFBQ8WX92 580 aa13.09□□□□□ -0.31
PRKD3-209ENST00000477132 SMARCD2Q92925 531 aa13.09□□□□□ -0.31
PRKD3-209ENST00000477132 ELSPBP1Q96BH3 223 aa13.09□□□□□ -0.31
PRKD3-209ENST00000477132 DHTKD1Q96HY7 919 aaPredicted RBP13.09□□□□□ -0.31
PRKD3-209ENST00000477132 ZNF518BQ9C0D4 1074 aa13.09□□□□□ -0.31
PRKD3-209ENST00000477132 ATXN3LQ9H3M9 355 aa13.09□□□□□ -0.31
PRKD3-209ENST00000477132 MAGEC2Q9UBF1 373 aaPredicted RBP13.09□□□□□ -0.31
PRKD3-209ENST00000477132 CA14Q9ULX7 337 aa13.09□□□□□ -0.31
PRKD3-209ENST00000477132 MYO16Q9Y6X6 1858 aa13.08□□□□□ -0.32
PRKD3-209ENST00000477132 MIA3Q5JRA6 1907 aa13.08□□□□□ -0.32
PRKD3-209ENST00000477132 PRAMEF12O95522 483 aa13.08□□□□□ -0.32
PRKD3-209ENST00000477132 F11P03951 625 aa13.08□□□□□ -0.32
PRKD3-209ENST00000477132 MAGEA11P43364 429 aa13.08□□□□□ -0.32
PRKD3-209ENST00000477132 MXI1P50539 228 aa13.08□□□□□ -0.32
PRKD3-209ENST00000477132 STX17P56962 302 aa13.08□□□□□ -0.32
PRKD3-209ENST00000477132 NLRP12P59046 1061 aa13.08□□□□□ -0.32
PRKD3-209ENST00000477132 RPL10AP62906 217 aaKnown RBP13.08□□□□□ -0.32
PRKD3-209ENST00000477132 STIM1Q13586 685 aa13.08□□□□□ -0.32
PRKD3-209ENST00000477132 GPR158Q5T848 1215 aa13.08□□□□□ -0.32
PRKD3-209ENST00000477132 KRT39Q6A163 491 aa13.08□□□□□ -0.32
PRKD3-209ENST00000477132 C4orf50Q6ZRC1 276 aa13.08□□□□□ -0.32
PRKD3-209ENST00000477132 SUGP1Q8IWZ8 645 aaKnown RBP13.08□□□□□ -0.32
PRKD3-209ENST00000477132 TMEM105Q8N8V8 129 aa13.08□□□□□ -0.32
PRKD3-209ENST00000477132 TAF4BQ92750 862 aa13.08□□□□□ -0.32
PRKD3-209ENST00000477132 TWNKQ96RR1 684 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms