RNA–Protein interactions for RNA: ENST00000476724.1

TMEM53-208, Transcript of transmembrane protein 53, humanhuman

TSL 1 (best)

Gene TMEM53, Length 2,075 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-208ENST00000476724 ZNF865P0CJ78 1059 aaPredicted RBP17.33■□□□□ 0.37
TMEM53-208ENST00000476724 ATF7P17544 494 aaPredicted RBP17.33■□□□□ 0.37
TMEM53-208ENST00000476724 TM4SF4P48230 202 aa17.33■□□□□ 0.37
TMEM53-208ENST00000476724 TMEM132AQ24JP5 1023 aa17.33■□□□□ 0.37
TMEM53-208ENST00000476724 P3H1Q32P28 736 aa17.33■□□□□ 0.37
TMEM53-208ENST00000476724 ATP13A4Q4VNC1 1196 aa17.33■□□□□ 0.37
TMEM53-208ENST00000476724 ALLCQ8N6M5 410 aa17.33■□□□□ 0.37
TMEM53-208ENST00000476724 PPP1R13LQ8WUF5 828 aa17.33■□□□□ 0.37
TMEM53-208ENST00000476724 TFAP2BQ92481 460 aa17.33■□□□□ 0.37
TMEM53-208ENST00000476724 NLRP4Q96MN2 994 aa17.33■□□□□ 0.37
TMEM53-208ENST00000476724 TTC25Q96NG3 672 aa17.33■□□□□ 0.37
TMEM53-208ENST00000476724 INO80BQ9C086 356 aaPredicted RBP17.33■□□□□ 0.37
TMEM53-208ENST00000476724 TUT1Q9H6E5 874 aaKnown RBP17.33■□□□□ 0.37
TMEM53-208ENST00000476724 SAMD15Q9P1V8 674 aa17.33■□□□□ 0.37
TMEM53-208ENST00000476724 DNPEPQ9ULA0 475 aa17.33■□□□□ 0.37
TMEM53-208ENST00000476724 KAT6AQ92794 2004 aa17.33■□□□□ 0.37
TMEM53-208ENST00000476724 hCG_1818297A0A087WSY0 165 aa17.33■□□□□ 0.36
TMEM53-208ENST00000476724 SIGLEC16A6NMB1 481 aa17.33■□□□□ 0.36
TMEM53-208ENST00000476724 TNPO2O14787 897 aaKnown RBP17.33■□□□□ 0.36
TMEM53-208ENST00000476724 DYNC1LI2O43237 492 aaPredicted RBP17.33■□□□□ 0.36
TMEM53-208ENST00000476724 KRT10P13645 584 aa17.33■□□□□ 0.36
TMEM53-208ENST00000476724 GSCP56915 257 aaPredicted RBP17.33■□□□□ 0.36
TMEM53-208ENST00000476724 OGDHQ02218 1023 aa17.33■□□□□ 0.36
TMEM53-208ENST00000476724 ZNF667Q5HYK9 610 aa17.33■□□□□ 0.36
TMEM53-208ENST00000476724 ZNF484Q5JVG2 852 aa17.33■□□□□ 0.36
TMEM53-208ENST00000476724 KAZNQ674X7 775 aa17.33■□□□□ 0.36
TMEM53-208ENST00000476724 OLFML2BQ68BL8 750 aa17.33■□□□□ 0.36
TMEM53-208ENST00000476724 NKD2Q969F2 451 aaPredicted RBP17.33■□□□□ 0.36
TMEM53-208ENST00000476724 CFAP57Q96MR6 1250 aa17.33■□□□□ 0.36
TMEM53-208ENST00000476724 BCO2Q9BYV7 579 aa17.33■□□□□ 0.36
TMEM53-208ENST00000476724 OSBPL7Q9BZF2 842 aa17.33■□□□□ 0.36
TMEM53-208ENST00000476724 PRMT7Q9NVM4 692 aaPredicted RBP17.33■□□□□ 0.36
TMEM53-208ENST00000476724 TPX2Q9ULW0 747 aaKnown RBP17.33■□□□□ 0.36
TMEM53-208ENST00000476724 GNEQ9Y223 722 aaKnown RBP17.33■□□□□ 0.36
TMEM53-208ENST00000476724 ANK1P16157 1881 aa17.33■□□□□ 0.36
TMEM53-208ENST00000476724 CENPFP49454 3210 aa17.33■□□□□ 0.36
TMEM53-208ENST00000476724 PI4K2BG5E9Z4 385 aa17.32■□□□□ 0.36
TMEM53-208ENST00000476724 ITGAVP06756 1048 aa17.32■□□□□ 0.36
TMEM53-208ENST00000476724 KRT7P08729 469 aa17.32■□□□□ 0.36
TMEM53-208ENST00000476724 HOXD8P13378 290 aaPredicted RBP17.32■□□□□ 0.36
TMEM53-208ENST00000476724 MAGEA4P43358 317 aa17.32■□□□□ 0.36
TMEM53-208ENST00000476724 HADHQ16836 314 aaKnown RBP17.32■□□□□ 0.36
TMEM53-208ENST00000476724 LRRC34Q8IZ02 419 aa17.32■□□□□ 0.36
TMEM53-208ENST00000476724 RBM15Q96T37 977 aaKnown RBP eCLIP17.32■□□□□ 0.36
TMEM53-208ENST00000476724 PPP1R16BQ96T49 567 aa17.32■□□□□ 0.36
TMEM53-208ENST00000476724 ARHGAP39Q9C0H5 1083 aa17.32■□□□□ 0.36
TMEM53-208ENST00000476724 TMEM120BA0PK00 339 aa17.32■□□□□ 0.36
TMEM53-208ENST00000476724 KRT3P12035 628 aa17.32■□□□□ 0.36
TMEM53-208ENST00000476724 RGS2P41220 211 aa17.32■□□□□ 0.36
TMEM53-208ENST00000476724 CDKN2BP42772 138 aa17.32■□□□□ 0.36
TMEM53-208ENST00000476724 VCPP55072 806 aaKnown RBP17.32■□□□□ 0.36
TMEM53-208ENST00000476724 MBTD1Q05BQ5 628 aa17.32■□□□□ 0.36
TMEM53-208ENST00000476724 MORF4L2Q15014 288 aa17.32■□□□□ 0.36
TMEM53-208ENST00000476724 FAM187BQ17R55 369 aa17.32■□□□□ 0.36
TMEM53-208ENST00000476724 CCDC38Q502W7 563 aa17.32■□□□□ 0.36
TMEM53-208ENST00000476724 LINC01465Q8N7H1 131 aa17.32■□□□□ 0.36
TMEM53-208ENST00000476724 TTC13Q8NBP0 860 aa17.32■□□□□ 0.36
TMEM53-208ENST00000476724 DYDC1Q8WWB3 177 aa17.32■□□□□ 0.36
TMEM53-208ENST00000476724 CCT6BQ92526 530 aa17.32■□□□□ 0.36
TMEM53-208ENST00000476724 KAT2BQ92831 832 aa17.32■□□□□ 0.36
TMEM53-208ENST00000476724 FAM118BQ9BPY3 351 aa17.32■□□□□ 0.36
TMEM53-208ENST00000476724 CDT1Q9H211 546 aa17.32■□□□□ 0.36
TMEM53-208ENST00000476724 MINDY3Q9H8M7 445 aa17.32■□□□□ 0.36
TMEM53-208ENST00000476724 KLHL11Q9NVR0 708 aa17.32■□□□□ 0.36
TMEM53-208ENST00000476724 LRRD1A4D1F6 860 aa17.31■□□□□ 0.36
TMEM53-208ENST00000476724 CA12O43570 354 aa17.31■□□□□ 0.36
TMEM53-208ENST00000476724 VIMP08670 466 aaKnown RBP17.31■□□□□ 0.36
TMEM53-208ENST00000476724 TCF4P15884 667 aa17.31■□□□□ 0.36
TMEM53-208ENST00000476724 ARSEP51690 589 aa17.31■□□□□ 0.36
TMEM53-208ENST00000476724 NR1H3Q13133 447 aa17.31■□□□□ 0.36
TMEM53-208ENST00000476724 OASLQ15646 514 aaKnown RBP17.31■□□□□ 0.36
TMEM53-208ENST00000476724 DGKDQ16760 1214 aa17.31■□□□□ 0.36
TMEM53-208ENST00000476724 KYAT1Q16773 422 aa17.31■□□□□ 0.36
TMEM53-208ENST00000476724 ANKRD20A8PQ5CZ79 823 aa17.31■□□□□ 0.36
TMEM53-208ENST00000476724 PCGF5Q86SE9 256 aa17.31■□□□□ 0.36
TMEM53-208ENST00000476724 CCDC13Q8IYE1 715 aa17.31■□□□□ 0.36
TMEM53-208ENST00000476724 DNAJC17Q9NVM6 304 aaKnown RBP17.31■□□□□ 0.36
TMEM53-208ENST00000476724 NXF1Q9UBU9 619 aaKnown RBP17.31■□□□□ 0.36
TMEM53-208ENST00000476724 IQCF3P0C7M6 154 aa17.3■□□□□ 0.36
TMEM53-208ENST00000476724 CD19P15391 556 aa17.3■□□□□ 0.36
TMEM53-208ENST00000476724 PSMA2P25787 234 aa17.3■□□□□ 0.36
TMEM53-208ENST00000476724 ATICP31939 592 aa17.3■□□□□ 0.36
TMEM53-208ENST00000476724 ZNF268Q14587 947 aaPredicted RBP17.3■□□□□ 0.36
TMEM53-208ENST00000476724 ACAP1Q15027 740 aa17.3■□□□□ 0.36
TMEM53-208ENST00000476724 MARCH8Q5T0T0 291 aa17.3■□□□□ 0.36
TMEM53-208ENST00000476724 EEF1DP3Q658K8 133 aa17.3■□□□□ 0.36
TMEM53-208ENST00000476724 DENND1BQ6P3S1 775 aa17.3■□□□□ 0.36
TMEM53-208ENST00000476724 VSTM1Q6UX27 236 aa17.3■□□□□ 0.36
TMEM53-208ENST00000476724 SCARA5Q6ZMJ2 495 aa17.3■□□□□ 0.36
TMEM53-208ENST00000476724 APBA2Q99767 749 aa17.3■□□□□ 0.36
TMEM53-208ENST00000476724 FAM124BQ9H5Z6 455 aaPredicted RBP17.3■□□□□ 0.36
TMEM53-208ENST00000476724 ASB7Q9H672 318 aa17.3■□□□□ 0.36
TMEM53-208ENST00000476724 PPCSQ9HAB8 311 aa17.3■□□□□ 0.36
TMEM53-208ENST00000476724 PCDH9Q9HC56 1237 aa17.3■□□□□ 0.36
TMEM53-208ENST00000476724 NAALADL1Q9UQQ1 740 aa17.3■□□□□ 0.36
TMEM53-208ENST00000476724 CCT8L1PA6NM43 557 aa17.3■□□□□ 0.36
TMEM53-208ENST00000476724 B4GALT5O43286 388 aa17.3■□□□□ 0.36
TMEM53-208ENST00000476724 IGHA2P01877 340 aa17.3■□□□□ 0.36
TMEM53-208ENST00000476724 KRT19P08727 400 aa17.3■□□□□ 0.36
TMEM53-208ENST00000476724 MCF2P10911 925 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms