RNA–Protein interactions for RNA: ENST00000476597.1

SEC13-214, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 614 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-214ENST00000476597 SLC38A8A6NNN8 435 aa11.56□□□□□ -0.56
SEC13-214ENST00000476597 ATP2C2O75185 946 aa11.56□□□□□ -0.56
SEC13-214ENST00000476597 TACC1O75410 805 aa11.56□□□□□ -0.56
SEC13-214ENST00000476597 NOL4O94818 638 aa11.56□□□□□ -0.56
SEC13-214ENST00000476597 PRAMEF12O95522 483 aa11.56□□□□□ -0.56
SEC13-214ENST00000476597 MYL1P05976 194 aa11.56□□□□□ -0.56
SEC13-214ENST00000476597 PDGFRBP09619 1106 aa11.56□□□□□ -0.56
SEC13-214ENST00000476597 CCNE1P24864 410 aa11.56□□□□□ -0.56
SEC13-214ENST00000476597 DDX6P26196 483 aaKnown RBP eCLIP11.56□□□□□ -0.563e-6■□□□□ 8.8
SEC13-214ENST00000476597 GNL1P36915 607 aaPredicted RBP11.56□□□□□ -0.56
SEC13-214ENST00000476597 MAGEA11P43364 429 aa11.56□□□□□ -0.56
SEC13-214ENST00000476597 TXNDC8Q6A555 127 aa11.56□□□□□ -0.56
SEC13-214ENST00000476597 C1orf228Q6PIY5 440 aa11.56□□□□□ -0.56
SEC13-214ENST00000476597 C4orf50Q6ZRC1 276 aa11.56□□□□□ -0.56
SEC13-214ENST00000476597 MON1AQ86VX9 555 aa11.56□□□□□ -0.56
SEC13-214ENST00000476597 SPATA2LQ8IUW3 424 aaPredicted RBP11.56□□□□□ -0.56
SEC13-214ENST00000476597 SLC9A9Q8IVB4 645 aa11.56□□□□□ -0.56
SEC13-214ENST00000476597 CELF5Q8N6W0 485 aaKnown RBP11.56□□□□□ -0.56
SEC13-214ENST00000476597 MAB21L3Q8N8X9 362 aa11.56□□□□□ -0.56
SEC13-214ENST00000476597 KIAA0895Q8NCT3 520 aa11.56□□□□□ -0.56
SEC13-214ENST00000476597 GOLGA5Q8TBA6 731 aa11.56□□□□□ -0.56
SEC13-214ENST00000476597 PLEKHO2Q8TD55 490 aa11.56□□□□□ -0.56
SEC13-214ENST00000476597 BPIFB1Q8TDL5 484 aa11.56□□□□□ -0.56
SEC13-214ENST00000476597 CSGALNACT1Q8TDX6 532 aa11.56□□□□□ -0.56
SEC13-214ENST00000476597 TRMT2BQ96GJ1 504 aaKnown RBP11.56□□□□□ -0.56
SEC13-214ENST00000476597 MSANTD3Q96H12 275 aa11.56□□□□□ -0.56
SEC13-214ENST00000476597 MMS19Q96T76 1030 aa11.56□□□□□ -0.56
SEC13-214ENST00000476597 SYT15Q9BQS2 421 aa11.56□□□□□ -0.56
SEC13-214ENST00000476597 LMAN1LQ9HAT1 526 aa11.56□□□□□ -0.56
SEC13-214ENST00000476597 CRTAC1Q9NQ79 661 aa11.56□□□□□ -0.56
SEC13-214ENST00000476597 EXOC1Q9NV70 894 aa11.56□□□□□ -0.56
SEC13-214ENST00000476597 MAGEC2Q9UBF1 373 aaPredicted RBP11.56□□□□□ -0.56
SEC13-214ENST00000476597 NDRG2Q9UN36 371 aaKnown RBP11.56□□□□□ -0.56
SEC13-214ENST00000476597 MAGED2Q9UNF1 606 aaPredicted RBP11.56□□□□□ -0.56
SEC13-214ENST00000476597 COL4A3Q01955 1670 aa11.55□□□□□ -0.56
SEC13-214ENST00000476597 GPR179Q6PRD1 2367 aa11.55□□□□□ -0.56
SEC13-214ENST00000476597 PDXKO00764 312 aa11.55□□□□□ -0.56
SEC13-214ENST00000476597 STAU1O95793 577 aaKnown RBP11.55□□□□□ -0.56
SEC13-214ENST00000476597 LMNAP02545 664 aaKnown RBP11.55□□□□□ -0.56
SEC13-214ENST00000476597 CHRNB1P11230 501 aa11.55□□□□□ -0.56
SEC13-214ENST00000476597 ATICP31939 592 aa11.55□□□□□ -0.56
SEC13-214ENST00000476597 AVPR1AP37288 418 aa11.55□□□□□ -0.56
SEC13-214ENST00000476597 SYKP43405 635 aa11.55□□□□□ -0.56
SEC13-214ENST00000476597 NDUFA8P51970 172 aa11.55□□□□□ -0.56
SEC13-214ENST00000476597 CLDN10P78369 228 aa11.55□□□□□ -0.56
SEC13-214ENST00000476597 PLCB2Q00722 1185 aa11.55□□□□□ -0.56
SEC13-214ENST00000476597 CSTF1Q05048 431 aaKnown RBP11.55□□□□□ -0.56
SEC13-214ENST00000476597 MTAPQ13126 283 aa11.55□□□□□ -0.56
SEC13-214ENST00000476597 MAPRE1Q15691 268 aaKnown RBP11.55□□□□□ -0.56
SEC13-214ENST00000476597 WDR72Q3MJ13 1102 aa11.55□□□□□ -0.56
SEC13-214ENST00000476597 ZC3H14Q6PJT7 736 aaKnown RBP11.55□□□□□ -0.56
SEC13-214ENST00000476597 VSTM1Q6UX27 236 aa11.55□□□□□ -0.56
SEC13-214ENST00000476597 SCN4BQ8IWT1 228 aa11.55□□□□□ -0.56
SEC13-214ENST00000476597 ADSSL1Q8N142 457 aa11.55□□□□□ -0.56
SEC13-214ENST00000476597 STKLD1Q8NE28 680 aa11.55□□□□□ -0.56
SEC13-214ENST00000476597 PARD3BQ8TEW8 1205 aa11.55□□□□□ -0.56
SEC13-214ENST00000476597 MRPS31Q92665 395 aaKnown RBP11.55□□□□□ -0.56
SEC13-214ENST00000476597 NELL1Q92832 810 aa11.55□□□□□ -0.56
SEC13-214ENST00000476597 USP13Q92995 863 aaPredicted RBP11.55□□□□□ -0.56
SEC13-214ENST00000476597 MYLPFQ96A32 169 aa11.55□□□□□ -0.56
SEC13-214ENST00000476597 ZFYVE19Q96K21 471 aa11.55□□□□□ -0.56
SEC13-214ENST00000476597 FAM83CQ9BQN1 747 aa11.55□□□□□ -0.56
SEC13-214ENST00000476597 MRPL45Q9BRJ2 306 aaKnown RBP11.55□□□□□ -0.56
SEC13-214ENST00000476597 SCAND2PQ9GZW5 306 aaPredicted RBP11.55□□□□□ -0.56
SEC13-214ENST00000476597 SMG9Q9H0W8 520 aaKnown RBP11.55□□□□□ -0.56
SEC13-214ENST00000476597 XYLT2Q9H1B5 865 aa11.55□□□□□ -0.56
SEC13-214ENST00000476597 CHRDQ9H2X0 955 aa11.55□□□□□ -0.56
SEC13-214ENST00000476597 KCTD10Q9H3F6 313 aa11.55□□□□□ -0.56
SEC13-214ENST00000476597 THG1LQ9NWX6 298 aaKnown RBP11.55□□□□□ -0.56
SEC13-214ENST00000476597 GTSE1Q9NYZ3 720 aa11.55□□□□□ -0.56
SEC13-214ENST00000476597 UXTQ9UBK9 157 aaPredicted RBP11.55□□□□□ -0.56
SEC13-214ENST00000476597 ATP6V1DQ9Y5K8 247 aa11.55□□□□□ -0.56
SEC13-214ENST00000476597 CACNA1IQ9P0X4 2223 aa11.55□□□□□ -0.56
SEC13-214ENST00000476597 ANK1P16157 1881 aa11.55□□□□□ -0.56
SEC13-214ENST00000476597 MYH15Q9Y2K3 1946 aa11.54□□□□□ -0.56
SEC13-214ENST00000476597 A0A1W2PQ27 194 aa11.54□□□□□ -0.56
SEC13-214ENST00000476597 A0A1W2PQ64 194 aa11.54□□□□□ -0.56
SEC13-214ENST00000476597 A0A1W2PQD8 194 aa11.54□□□□□ -0.56
SEC13-214ENST00000476597 SPECC1L-ADORA2AF8WAN1 911 aa11.54□□□□□ -0.56
SEC13-214ENST00000476597 C4BPAP04003 597 aaKnown RBP11.54□□□□□ -0.56
SEC13-214ENST00000476597 RPN1P04843 607 aaKnown RBP11.54□□□□□ -0.56
SEC13-214ENST00000476597 BDNFP23560 247 aa11.54□□□□□ -0.56
SEC13-214ENST00000476597 SOX9P48436 509 aa11.54□□□□□ -0.56
SEC13-214ENST00000476597 CASP4P49662 377 aa11.54□□□□□ -0.56
SEC13-214ENST00000476597 KPNA1P52294 538 aaPredicted RBP11.54□□□□□ -0.56
SEC13-214ENST00000476597 AP3M2P53677 418 aa11.54□□□□□ -0.56
SEC13-214ENST00000476597 MYL6P60660 151 aa11.54□□□□□ -0.56
SEC13-214ENST00000476597 PSMC1P62191 440 aaKnown RBP11.54□□□□□ -0.56
SEC13-214ENST00000476597 TRPC3Q13507 836 aa11.54□□□□□ -0.56
SEC13-214ENST00000476597 ZNF268Q14587 947 aaPredicted RBP11.54□□□□□ -0.56
SEC13-214ENST00000476597 TXNDC11Q6PKC3 985 aa11.54□□□□□ -0.56
SEC13-214ENST00000476597 RALGPS2Q86X27 583 aaPredicted RBP11.54□□□□□ -0.56
SEC13-214ENST00000476597 ZBTB44Q8NCP5 570 aa11.54□□□□□ -0.56
SEC13-214ENST00000476597 OR6B3Q8NGW1 331 aa11.54□□□□□ -0.56
SEC13-214ENST00000476597 TTC8Q8TAM2 541 aa11.54□□□□□ -0.56
SEC13-214ENST00000476597 MYCBPAPQ8TBZ2 947 aa11.54□□□□□ -0.56
SEC13-214ENST00000476597 SYAP1Q96A49 352 aaPredicted RBP11.54□□□□□ -0.56
SEC13-214ENST00000476597 SPATA17Q96L03 361 aa11.54□□□□□ -0.56
SEC13-214ENST00000476597 CEP295NLQ96MC4 621 aa11.54□□□□□ -0.56
SEC13-214ENST00000476597 IER2Q9BTL4 223 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms